BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007656
         (1719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   233   1e-58
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   232   2e-58
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   231   3e-58
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   221   4e-55
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    208   3e-51

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  233 bits (594), Expect = 1e-58
 Identities = 158/407 (38%), Positives = 224/407 (55%), Gaps = 12/407 (2%)
 Frame = +2

Query: 317  DWSDDIPDYLLDEIVARLDSYRDYVRLRTVCPIWRSFVPQIPKHLPFALPSIVLPCDDTD 496
            DWS   P+ LLD I  +   Y DYVR R VC  WR+ VP+ P HLP  LP ++LP     
Sbjct: 3    DWSQLHPE-LLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPH 61

Query: 497  SKAFNLF-IAASVAHKLELPKAE-QCLWKGSSRGWLVQLEDSPSINLINPLTSTWMQLPP 670
                  F ++ +  H L+LP+A  +   +GSS GWL+ L+++P I L+NPLT + + LPP
Sbjct: 62   HTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPP 121

Query: 671  LTTFPNVLEYIPERIGSEYSVMTLSMGKEKMTLFSLVKMKHFCIKKLVLSSSP-KGKNCI 847
            L+TFPNV+ +    +G EY++ T S     +   SL KM+   IKK +LSSSP  G + I
Sbjct: 122  LSTFPNVVRFNFADVGREYALRTSS---GDVYTRSLKKMRDSFIKKTILSSSPANGSDFI 178

Query: 848  AMAIYGDCDKLAWCRIGDERWKTVEGGWHFIDDIIHFDGKFYALDYTGTVIILPDEEVGA 1027
            A+ I      LA CR  D+ W  +E    + +D+I   G FYA++  G++ +    +V  
Sbjct: 179  AVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVC---DVSG 235

Query: 1028 SCPKATFFAKPPNPDEPEFTSDNLYLVESSGELLMVDRII--------ESGSKKYNTTVG 1183
            S P+ +    P      +F  D  YLVES  ELL+V R +        +  S  Y TT  
Sbjct: 236  SSPRVSIIEMP-----QQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTT-R 289

Query: 1184 FEVFKLNVNNFRSPWSKVKTLGDRMLFLGQSESFSMSSCDLP-CLWKENRIYFTDDCNRR 1360
            F+V +L++   R  W  V +LGDR LFLG++ S S+SS D P C  K N IY+TDD +  
Sbjct: 290  FQVCRLDLKAPR--WEVVSSLGDRALFLGENLSLSLSSVDFPGC--KGNCIYYTDDYSED 345

Query: 1361 FDIHMELSSRMEVFSLEDGRLQPLPLPSGCEGCRRRVWPAPIWITPN 1501
                +     + +F+LEDG ++PLP    C   R R WP P+W+TPN
Sbjct: 346  NYDGIGGEQDLGIFNLEDGSIEPLP----CSHFRIR-WPPPLWVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  232 bits (592), Expect = 2e-58
 Identities = 150/410 (36%), Positives = 230/410 (56%), Gaps = 14/410 (3%)
 Frame = +2

Query: 314  MDWSDDIPDYLLDEIVARLDSYRDYVRLRTVCPIWRSFVPQIPKHLPFALPSIVLPCDDT 493
            +DW+  +P  L++ I  ++  Y DY+  + VC  W+S +P+ P HLP  LP ++LP   +
Sbjct: 3    VDWTQ-LPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQS 61

Query: 494  DSKAFNLFIAASVA--HKLELPKA----EQCLWKGSSRGWLVQLEDSPSINLINPLTSTW 655
            +  ++  F   S    H L LP+A    + C   GSS GWL+ L+DSPSI +INPLT   
Sbjct: 62   NQSSYRAFFNLSTYKFHSLNLPEASHRKKHC---GSSHGWLIILDDSPSILVINPLTRRK 118

Query: 656  MQLPPLTTFPNVLEYIPERIGSEYSVMTLSMGKEKMTLFSLVKMKHFCIKKLVLSSSP-- 829
            + LP +++FPNV+ +    +G EY  + ++   E+ T  SL +M+   IKK+V+SSSP  
Sbjct: 119  IHLPAISSFPNVVSFDYANVGREY--LLVNPQGERNTA-SLRQMRDGFIKKVVMSSSPLE 175

Query: 830  -KGKNCIAMAIYGDCDKLAWCRIGDERWKTVEGGWHFIDDIIHFDGKFYALDYTGTVIIL 1006
             KG   +AMAI      LA+C+ GDE W  VE    F +D+I+F+G FYA++  G +++ 
Sbjct: 176  KKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVC 235

Query: 1007 PDEEVGASCPKATFFAKPPNPDEPEFTSDNLYLVESSGELLMVDRIIESGSK---KYNTT 1177
               +V  + PK +F   P      +   D  YLV S   LL+V R ++   +       T
Sbjct: 236  ---DVNGNSPKVSFIETP-----RQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKT 287

Query: 1178 VGFEVFKLNVNNFRSPWSKVKTLGDRMLFLGQSESFSMSSCDLP-CLWKENRIYFTDDCN 1354
              FEVFKL++N  R  W +V +LGD MLF+G++ S ++S+  L  C+   + IY+TDD +
Sbjct: 288  ARFEVFKLDLNGPR--WERVTSLGDMMLFIGENSSLALSASGLSGCM--GDCIYYTDDYS 343

Query: 1355 -RRFDIHMELSSRMEVFSLEDGRLQPLPLPSGCEGCRRRVWPAPIWITPN 1501
               +D H+     + +F L DG ++PLP         R  WP P+WI+PN
Sbjct: 344  ANNYDGHIG-EHDLGIFKLSDGSIEPLPCYPR-NSYSRLQWPPPLWISPN 391


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  231 bits (590), Expect = 3e-58
 Identities = 158/407 (38%), Positives = 223/407 (54%), Gaps = 12/407 (2%)
 Frame = +2

Query: 317  DWSDDIPDYLLDEIVARLDSYRDYVRLRTVCPIWRSFVPQIPKHLPFALPSIVLPCDDTD 496
            DWS   P+ LLD I  +   Y DYVR R VC  WR+ VP+ P HLP  LP ++LP     
Sbjct: 3    DWSQLHPE-LLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPH 61

Query: 497  SKAFNLF-IAASVAHKLELPKAE-QCLWKGSSRGWLVQLEDSPSINLINPLTSTWMQLPP 670
                  F ++ +  H L+LP+A  +   +GSS GWL+ L+++P I L+NPLT + + LPP
Sbjct: 62   HTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPP 121

Query: 671  LTTFPNVLEYIPERIGSEYSVMTLSMGKEKMTLFSLVKMKHFCIKKLVLSSSP-KGKNCI 847
            L+TFPNV+ +    +G EY++ T S     +   SL KM+   IKK +LSSSP  G + I
Sbjct: 122  LSTFPNVVRFNFADVGREYALRTSS---GDVYTRSLKKMRDSFIKKTILSSSPANGSDFI 178

Query: 848  AMAIYGDCDKLAWCRIGDERWKTVEGGWHFIDDIIHFDGKFYALDYTGTVIILPDEEVGA 1027
            A+ I      LA CR  D+ W  +E    + +D+I   G FYA++  G++ +    +V  
Sbjct: 179  AVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVC---DVSG 235

Query: 1028 SCPKATFFAKPPNPDEPEFTSDNLYLVESSGELLMVDRII--------ESGSKKYNTTVG 1183
            S P+ +    P      +F  D  YLVES  ELL+V R +        +  S  Y TT  
Sbjct: 236  SSPRVSIIEMP-----QQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTT-R 289

Query: 1184 FEVFKLNVNNFRSPWSKVKTLGDRMLFLGQSESFSMSSCDLP-CLWKENRIYFTDDCNRR 1360
            F+V +L+    R  W  V +LGDR LFLG++ S S+SS D P C  K N IY+TDD +  
Sbjct: 290  FQVCRLDSKAPR--WEVVSSLGDRALFLGENLSLSLSSVDFPGC--KGNCIYYTDDYSED 345

Query: 1361 FDIHMELSSRMEVFSLEDGRLQPLPLPSGCEGCRRRVWPAPIWITPN 1501
                +     + +F+LEDG ++PLP    C   R R WP P+W+TPN
Sbjct: 346  NYDGIGGEQDLGIFNLEDGSIEPLP----CSHFRIR-WPPPLWVTPN 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  221 bits (564), Expect = 4e-55
 Identities = 153/422 (36%), Positives = 228/422 (54%), Gaps = 26/422 (6%)
 Frame = +2

Query: 314  MDWSDDIPDYLLDEIVARLDSYRDYVRLRTVCPIWRSFVPQIPKHLPFALPSIVLPCDDT 493
            MDWS  +P  L++ I   L  Y DY+  R VC  WR  +P+ P HLP  LP ++LP   +
Sbjct: 3    MDWSQ-LPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQS 61

Query: 494  DS----KAFNLFIAASVAHKLELPKAE----QCLWKGSSRGWLVQLEDSPSINLINPLTS 649
             S    +AF   ++ +  H L LP+       C   GSS GWL+ L+D+P+I LINPLT 
Sbjct: 62   QSNQSRRAF-FSLSTNKFHFLNLPEVSYRKRHC---GSSHGWLMILDDTPTILLINPLTR 117

Query: 650  TWMQLPPLTTFPNVLEYIPERIGSEYSVMTLSMGKEKMTLFSLVKMKHFCIKKLVLSSSP 829
              + LPPL++FPNV+ +    IG EY++  L +G E++T+ SL +M+   I+K+VLSSSP
Sbjct: 118  AKLSLPPLSSFPNVISFNYSDIGREYALRNL-LG-ERVTV-SLRQMRDSFIRKVVLSSSP 174

Query: 830  -KGKNCIAMAIYGDCDKLAWCRIGDERWKTVEGGWHFIDDIIHFDGKFYALDYTGTVIIL 1006
             K  N + +AI    D LA+CR GD+ W  VE    F +D+I  +G FYA++  G ++I 
Sbjct: 175  LKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVIC 234

Query: 1007 PDEEVGASCPKATFFAKPPNPDEPEFTSDNLYLVESSGELLMVDRII---------ESGS 1159
               ++ +  P+ +F   P      +   D  YLV S  ELL+V R +         +   
Sbjct: 235  ---DISSDSPRVSFMETP-----RQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEP 286

Query: 1160 KKYNTTVGFEVFKLNVNNFRSPWSKVKTLGDRMLFLGQSESFSMSSCDLP-CLWKENRIY 1336
                 T+ FEVF+L+ N     W ++ TLGD+ LF+G++ S S+S+ D   C+   N IY
Sbjct: 287  HLIYRTIRFEVFRLDWNG--PQWLRMSTLGDKALFIGENSSLSLSATDFSGCM--GNCIY 342

Query: 1337 FTDD-CNRRFDIHMELSSRMEVFSLEDGRLQPLPLPSGCEGCRRR------VWPAPIWIT 1495
            +TDD  +  +D H      + +F L D  ++PLP       C  R       W  P+W++
Sbjct: 343  YTDDYLDANYDGHFG-DHDLGIFKLCDETIEPLP-------CYPRNFTSPLQWSPPLWVS 394

Query: 1496 PN 1501
            PN
Sbjct: 395  PN 396


>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score =  208 bits (530), Expect = 3e-51
 Identities = 155/409 (37%), Positives = 216/409 (52%), Gaps = 14/409 (3%)
 Frame = +2

Query: 317  DWSDDIPDYLLDEIVARLDSYRDYVRLRTVCPIWRSFVPQIPKHLPFALPSIVLPC-DDT 493
            DW++  PD LL +I   L  Y DY+R R VC  WRS VP+IP  LP  LP +++P   D 
Sbjct: 3    DWTELPPD-LLQQISDYLTVYSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPLYHDC 61

Query: 494  DSKAFNLFIAASVAHKLELPKAEQCLWK---GSSRGWLVQLEDSPSINLINPLTSTWMQL 664
                FN   + +  H L LP+A   L K   GSS GWL  L+++PSI L+NPLT    +L
Sbjct: 62   RCGLFNF--SDNKIHFLYLPEAS--LRKRPCGSSHGWLTILDETPSILLLNPLTRAKFRL 117

Query: 665  PPLTTFPNVLEYIPERIGSEYSVMTLSMGKEKMTLFSLVKMKHFCIKKLVLSSSPKGKN- 841
            PPL+TFPNV+ +   R+G EY + T +     +   +L +M+   +KK+VLSSSP  +N 
Sbjct: 118  PPLSTFPNVVSFDYSRVGREYLIRTPT---GHIYTRNLRQMRDSFVKKIVLSSSPSNQND 174

Query: 842  CIAMAIYGDCDKLAWCRIGDERWKTVEGGWHFIDDIIHFDGKFYALDYTGTVIILPDEEV 1021
             +A+AI      LA+CR G   W  V+      +D+I+ DG FYA+D  G V ++   ++
Sbjct: 175  FLAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLM---DL 231

Query: 1022 GASCPKATFFAKPPNPDEPEFTSDNLYLVESSGELLMVDR---IIESG------SKKYNT 1174
              S  + +  A      E +   D  YLV    ELL+V R   I+  G      S  Y  
Sbjct: 232  RGSRSQVSLVA-----TERQLAGDIQYLVRLGQELLLVSRYLDIVNDGMDDELISVMYR- 285

Query: 1175 TVGFEVFKLNVNNFRSPWSKVKTLGDRMLFLGQSESFSMSSCDLPCLWKENRIYFTDDCN 1354
            TV FEVF++     R  W KV+ L +  LF+G + S + S+ D   +   N IY+TDD +
Sbjct: 286  TVRFEVFRMEWEGPR--WEKVENLNEMALFVGGNSSMAFSAADFGEI-SGNCIYYTDDYS 342

Query: 1355 RRFDIHMELSSRMEVFSLEDGRLQPLPLPSGCEGCRRRVWPAPIWITPN 1501
                        M +F L D   +PLP  SG    RRR+ P PIW+TPN
Sbjct: 343  DSDYQGQGEEPDMGIFRLCDESFEPLPYYSGGSHSRRRLLP-PIWVTPN 390