BLASTX nr result
ID: Coptis21_contig00007643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00007643
(1970 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 743 0.0
ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putativ... 730 0.0
ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|2... 729 0.0
ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 718 0.0
ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 717 0.0
>ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
vinifera]
Length = 595
Score = 743 bits (1917), Expect = 0.0
Identities = 378/528 (71%), Positives = 435/528 (82%), Gaps = 2/528 (0%)
Frame = -2
Query: 1969 SGKTLAFLVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSML 1790
SGKTLAF+VPLVEILRR+S PKPH+V+GVILSPTRELS+QIY+VAQ F+ TL NV+S+L
Sbjct: 68 SGKTLAFVVPLVEILRRASSAPKPHQVLGVILSPTRELSSQIYNVAQPFISTLPNVKSVL 127
Query: 1789 LVGGTSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGF 1610
LVGG +++D+K IEEEGANLLIGTPGR+YDIMERMD+LDFRNLEILILDEADRLL+MGF
Sbjct: 128 LVGGVEVKSDLKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILILDEADRLLDMGF 187
Query: 1609 QKQINSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLD--ISSKQL 1436
QKQI SII+ LPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR E K L+ +SS+QL
Sbjct: 188 QKQITSIIARLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQL 247
Query: 1435 ASSKTPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAAL 1256
ASSKTP GL+ EYL+CEA+KK SQLVD + K+ ++K+IIYFMTCACVDYW V+L +L+ L
Sbjct: 248 ASSKTPSGLNIEYLECEADKKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVILPRLSVL 307
Query: 1255 KKCPIISLHGKMKQIGREKALASFTELSSGVLLCTDVAARGLDIPGIDWIVQYDPPQDPN 1076
K +I LHGKMKQ REKALASFT LSSG+LLCTDVAARGLDIPG+D IVQYDPPQDPN
Sbjct: 308 KGFSLIPLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDPN 367
Query: 1075 VFVHRVGRTARFGRSGRAILFLLPKEEAYAEFLRIRNVPLEERECCNDVPDIVPQIRSAA 896
VF+HRVGRTAR GR G A++FLLPKEEAY EFLRIR VPL+ C +D D+VPQIRSAA
Sbjct: 368 VFIHRVGRTARMGRQGSAVVFLLPKEEAYVEFLRIRRVPLQGMTCSSDASDVVPQIRSAA 427
Query: 895 KEDRDVMEKGLKAFVSFIRAYKEHHCPYIFRLKDLEIGKLAMGYGLLQLPAIPDVKQYKL 716
K+DRDVMEKGL+AFVSF+RAYKEHHC YIFR K+LEIGKLAMGYGLLQLP++P+VK + L
Sbjct: 428 KKDRDVMEKGLRAFVSFVRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMPEVKHHSL 487
Query: 715 STDGFVKDEDINVADIKFRDKLRXXXXXXXXXXXXXXXXXXXXXXXXKAKLNATSTVMRK 536
ST+GF EDIN +IK++DK R + TVMRK
Sbjct: 488 STEGFTPVEDINFEEIKYKDKSREKQRKKNLQAKKAVQDQEPKPQKPNKTPHTAPTVMRK 547
Query: 535 KTAKQRRAAQTVEDADELDRDYRXXXXXXKGTIDESEFAKLTGTEELI 392
KTAKQRR AQT+ED D+L R+YR KGTIDESEFAKLTGTEEL+
Sbjct: 548 KTAKQRRTAQTIEDEDDLAREYRLLKKLKKGTIDESEFAKLTGTEELL 595
>ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 592
Score = 730 bits (1885), Expect = 0.0
Identities = 376/527 (71%), Positives = 430/527 (81%), Gaps = 1/527 (0%)
Frame = -2
Query: 1969 SGKTLAFLVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSML 1790
SGKTLAF+VPLVEILRR S K H+VMG+ILSPTRELS+QIY+VAQ F+ETLSNV+SML
Sbjct: 66 SGKTLAFVVPLVEILRRLSSPIKLHQVMGIILSPTRELSSQIYNVAQPFIETLSNVKSML 125
Query: 1789 LVGGTSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGF 1610
LVGG ++AD+K IEEEGAN+LIGTPGR++DIMER+DILDFRNLE+LILDEADRLL+MGF
Sbjct: 126 LVGGVDVKADVKKIEEEGANILIGTPGRLFDIMERVDILDFRNLEVLILDEADRLLDMGF 185
Query: 1609 QKQINSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLDIS-SKQLA 1433
QKQI SIIS LPKLRRTGLFSATQTEAVEEL+KAGLRNPVRVEVR + K L+ S S QL+
Sbjct: 186 QKQITSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAQTKSLNESASSQLS 245
Query: 1432 SSKTPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAALK 1253
SSKTP GL EYL+CEA+ K S LV + K+ ++K+I+YFMTCACVDYW VVL +L ALK
Sbjct: 246 SSKTPSGLQLEYLECEADMKPSHLVSLLNKNKSKKIIVYFMTCACVDYWGVVLPRLTALK 305
Query: 1252 KCPIISLHGKMKQIGREKALASFTELSSGVLLCTDVAARGLDIPGIDWIVQYDPPQDPNV 1073
+I LHGKMKQ R+KALASFT L+SG+LLCTDVAARGLDIPG+D IVQYDPPQDPNV
Sbjct: 306 DFSLIPLHGKMKQTARDKALASFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNV 365
Query: 1072 FVHRVGRTARFGRSGRAILFLLPKEEAYAEFLRIRNVPLEERECCNDVPDIVPQIRSAAK 893
F+HRVGRTAR GR G AI+FLLPKEEAY EFLRIR VPL+E + +D PD+VPQIRSAAK
Sbjct: 366 FIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLQEMKITDDAPDVVPQIRSAAK 425
Query: 892 EDRDVMEKGLKAFVSFIRAYKEHHCPYIFRLKDLEIGKLAMGYGLLQLPAIPDVKQYKLS 713
+DRDVMEKGL+AFVSFIRAYKEHHC YIFR K+LE+GKL MGYGLLQLP++P+VK + LS
Sbjct: 426 KDRDVMEKGLRAFVSFIRAYKEHHCSYIFRWKELEVGKLGMGYGLLQLPSMPEVKHHSLS 485
Query: 712 TDGFVKDEDINVADIKFRDKLRXXXXXXXXXXXXXXXXXXXXXXXXKAKLNATSTVMRKK 533
T GF EDI + DIKF+DK R +A TVMRKK
Sbjct: 486 TVGFTPAEDIKLEDIKFKDKSREKQRKKNLQAKKEKQQQEPKPQKPNKNPSAAPTVMRKK 545
Query: 532 TAKQRRAAQTVEDADELDRDYRXXXXXXKGTIDESEFAKLTGTEELI 392
TAKQRRAAQTVED DEL R+YR KGTIDESEFAKLTGTE+L+
Sbjct: 546 TAKQRRAAQTVEDEDELSREYRLLKKLKKGTIDESEFAKLTGTEDLL 592
>ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|222852002|gb|EEE89549.1|
predicted protein [Populus trichocarpa]
Length = 592
Score = 729 bits (1881), Expect = 0.0
Identities = 372/528 (70%), Positives = 434/528 (82%), Gaps = 2/528 (0%)
Frame = -2
Query: 1969 SGKTLAFLVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSML 1790
SGKTLAF+VPLVEILRRSS +PKPH+VMG+I+SPTRELS+QIY+VAQ F+ TLSN +SML
Sbjct: 66 SGKTLAFVVPLVEILRRSS-SPKPHQVMGIIISPTRELSSQIYNVAQPFIATLSNFKSML 124
Query: 1789 LVGGTSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGF 1610
LVGG ++AD+K IEEEGANLLIGTPGR++DIM+R+D+LDFRNLE+LILDEADRLL+MGF
Sbjct: 125 LVGGMDVKADVKMIEEEGANLLIGTPGRLFDIMDRVDVLDFRNLEVLILDEADRLLDMGF 184
Query: 1609 QKQINSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLD--ISSKQL 1436
QKQ+NSIIS LPKLRRTGLFSATQTEAVEELSKAGLRNPV+VEVR E K L+ +S +QL
Sbjct: 185 QKQLNSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVKVEVRAETKSLNNSVSGQQL 244
Query: 1435 ASSKTPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAAL 1256
A SKTP GL EYL+CEA+KK SQLVD + K+ ++K+IIYFMTCACVDYW VVL +L L
Sbjct: 245 APSKTPSGLLLEYLECEADKKPSQLVDLLVKNKSKKIIIYFMTCACVDYWGVVLPRLTVL 304
Query: 1255 KKCPIISLHGKMKQIGREKALASFTELSSGVLLCTDVAARGLDIPGIDWIVQYDPPQDPN 1076
+ISLHGKMKQ REKAL SFT L+SG+LLCTDVAARGLDIPG+D IVQYDPPQDPN
Sbjct: 305 NGFSLISLHGKMKQTAREKALTSFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDPN 364
Query: 1075 VFVHRVGRTARFGRSGRAILFLLPKEEAYAEFLRIRNVPLEERECCNDVPDIVPQIRSAA 896
VFVHRVGRTAR GR G +I+FLLPKEEAY EFLRIR VPL ER+C +D PD+VPQIRSAA
Sbjct: 365 VFVHRVGRTARLGRQGSSIVFLLPKEEAYVEFLRIRRVPLLERKCADDAPDVVPQIRSAA 424
Query: 895 KEDRDVMEKGLKAFVSFIRAYKEHHCPYIFRLKDLEIGKLAMGYGLLQLPAIPDVKQYKL 716
K+DRDVMEKGL+AFVS+IRAYKEHHC YIFR K+LE+GKL MGYGLLQLP++P+VK + L
Sbjct: 425 KKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEVGKLGMGYGLLQLPSMPEVKHHSL 484
Query: 715 STDGFVKDEDINVADIKFRDKLRXXXXXXXXXXXXXXXXXXXXXXXXKAKLNATSTVMRK 536
ST F +D+N+ +IK++DK R +A +T MRK
Sbjct: 485 STKDFTPVDDLNLEEIKYKDKSRQKQRRKNLQAKKEARQQESKPQKVSKTPSAAATAMRK 544
Query: 535 KTAKQRRAAQTVEDADELDRDYRXXXXXXKGTIDESEFAKLTGTEELI 392
KTAKQRRAAQTVED +EL R+YR KGTIDESEF KLTGT+EL+
Sbjct: 545 KTAKQRRAAQTVEDEEELAREYRLLKKLKKGTIDESEFEKLTGTDELL 592
>ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine max]
Length = 589
Score = 718 bits (1854), Expect = 0.0
Identities = 369/528 (69%), Positives = 429/528 (81%), Gaps = 2/528 (0%)
Frame = -2
Query: 1969 SGKTLAFLVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSML 1790
SGKTLAF+VPLVEILRRSS PKPH+V+G+I+SPTRELSTQIYHVAQ F+ TL+NV+SML
Sbjct: 63 SGKTLAFVVPLVEILRRSSSHPKPHQVLGIIISPTRELSTQIYHVAQPFISTLANVKSML 122
Query: 1789 LVGGTSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGF 1610
LVGG ++AD+K IEEEGAN+LIGTPGR+YDIM RMD+LD +NLEILILDEADRLL+MGF
Sbjct: 123 LVGGAEVKADLKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDMGF 182
Query: 1609 QKQINSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLD--ISSKQL 1436
QKQI SII+ LPKLRRTGLFSATQTEA+EEL+KAGLRNPVRVEVR E K + SSKQ
Sbjct: 183 QKQITSIITLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSENGPASSKQP 242
Query: 1435 ASSKTPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAAL 1256
SSKTP GLH EYL+CEA+KK SQLV + K++++K+IIYFMTCACVDYW VL L+ L
Sbjct: 243 ESSKTPSGLHIEYLECEADKKPSQLVHILIKNLSKKIIIYFMTCACVDYWGAVLPCLSVL 302
Query: 1255 KKCPIISLHGKMKQIGREKALASFTELSSGVLLCTDVAARGLDIPGIDWIVQYDPPQDPN 1076
K +I LHGKMKQ REKALASFT LS+G+LLCTDVAARGLDIPG+D IVQYDPPQDPN
Sbjct: 303 KGFSLIPLHGKMKQSAREKALASFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPN 362
Query: 1075 VFVHRVGRTARFGRSGRAILFLLPKEEAYAEFLRIRNVPLEERECCNDVPDIVPQIRSAA 896
VF+HRVGRTAR G+ G A++FLLPKEE+Y EFLRIR VPL+ER C ++ D+VPQIRSAA
Sbjct: 363 VFIHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERICADEASDVVPQIRSAA 422
Query: 895 KEDRDVMEKGLKAFVSFIRAYKEHHCPYIFRLKDLEIGKLAMGYGLLQLPAIPDVKQYKL 716
K+DRDVMEKG+KAFVS+IRAYKEHHC YIFR K+LEIGKLA G+GLLQLP++P+VK + L
Sbjct: 423 KKDRDVMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLATGFGLLQLPSMPEVKHHSL 482
Query: 715 STDGFVKDEDINVADIKFRDKLRXXXXXXXXXXXXXXXXXXXXXXXXKAKLNATSTVMRK 536
S DGF EDIN+ DIK+RDK R K NA T MRK
Sbjct: 483 SIDGFEPVEDINLGDIKYRDKSREKQRKKNLQAKKEAKEKEPKPQKPKKTPNA-PTDMRK 541
Query: 535 KTAKQRRAAQTVEDADELDRDYRXXXXXXKGTIDESEFAKLTGTEELI 392
KTA+QRRA QT+ED +EL +YR KGTIDE+E+AKLTGTEEL+
Sbjct: 542 KTARQRRAQQTMEDEEELMHEYRLLKKLKKGTIDENEYAKLTGTEELL 589
>ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform 1
[Glycine max]
Length = 589
Score = 717 bits (1850), Expect = 0.0
Identities = 367/528 (69%), Positives = 425/528 (80%), Gaps = 2/528 (0%)
Frame = -2
Query: 1969 SGKTLAFLVPLVEILRRSSETPKPHKVMGVILSPTRELSTQIYHVAQTFVETLSNVRSML 1790
SGKTLAF++PLVEILRRSS PKPHKV+G+I+SPTRELSTQIYHVAQ+F+ TL NV+SML
Sbjct: 63 SGKTLAFVIPLVEILRRSSSHPKPHKVLGIIISPTRELSTQIYHVAQSFISTLMNVKSML 122
Query: 1789 LVGGTSLRADMKSIEEEGANLLIGTPGRIYDIMERMDILDFRNLEILILDEADRLLEMGF 1610
LVGG ++ D+K IEEEGAN+LIGTPGR+YDIM RMD+LD +NLEILILDEADRLL+MGF
Sbjct: 123 LVGGAEVKTDIKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDMGF 182
Query: 1609 QKQINSIISHLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTEMKMLD--ISSKQL 1436
QKQI SIIS LPKLRRTGLFSATQTEA+EEL+KAGLRNPVRVEVR E K SSKQ
Sbjct: 183 QKQITSIISLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSEKGPASSKQP 242
Query: 1435 ASSKTPLGLHNEYLKCEAEKKSSQLVDFITKHVNEKMIIYFMTCACVDYWWVVLQQLAAL 1256
SSKTP GLH EYL+CE +KK SQL+D + K+ ++K+IIYFMTCACVDYW VL L+ L
Sbjct: 243 ESSKTPSGLHIEYLECEEDKKPSQLLDILIKNRSKKIIIYFMTCACVDYWGAVLPCLSVL 302
Query: 1255 KKCPIISLHGKMKQIGREKALASFTELSSGVLLCTDVAARGLDIPGIDWIVQYDPPQDPN 1076
K +I LHGKMKQ REKALASFT LS+G+LLCTDVAARGLDIPG+D IVQYDPPQDPN
Sbjct: 303 KGFSLIPLHGKMKQSAREKALASFTTLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPN 362
Query: 1075 VFVHRVGRTARFGRSGRAILFLLPKEEAYAEFLRIRNVPLEERECCNDVPDIVPQIRSAA 896
VF+HRVGRTAR G+ G A++FLLPKEE+Y EFLRIR VPL+ER C +D D+VPQIRSAA
Sbjct: 363 VFIHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERICSDDATDVVPQIRSAA 422
Query: 895 KEDRDVMEKGLKAFVSFIRAYKEHHCPYIFRLKDLEIGKLAMGYGLLQLPAIPDVKQYKL 716
K+DRDVMEKG+KAFVS+IRAYKEHHC YIFR K+LEIGKLA G+GLLQLP++P+VK + L
Sbjct: 423 KKDRDVMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLATGFGLLQLPSMPEVKHHSL 482
Query: 715 STDGFVKDEDINVADIKFRDKLRXXXXXXXXXXXXXXXXXXXXXXXXKAKLNATSTVMRK 536
STDGF EDIN+ DIK+RDK R K T RK
Sbjct: 483 STDGFEPVEDINLVDIKYRDKSR-EKQRKKNLQAKKEAKEREPKPQKPKKTPIAPTATRK 541
Query: 535 KTAKQRRAAQTVEDADELDRDYRXXXXXXKGTIDESEFAKLTGTEELI 392
KTA+QRRA QT+ED +EL ++YR KGTIDE+E+AKLTGTEEL+
Sbjct: 542 KTARQRRAQQTMEDEEELMQEYRLLKKLKKGTIDENEYAKLTGTEELL 589