BLASTX nr result

ID: Coptis21_contig00007638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007638
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD41409.1|AF159562_1 cytosolic class II low molecular weight...   191   2e-46
gb|ACV93250.1| CII small heat shock protein 1 [Prunus salicina]       188   2e-45
emb|CAN67480.1| hypothetical protein VITISV_004918 [Vitis vinifera]   186   5e-45
ref|XP_002308537.1| predicted protein [Populus trichocarpa] gi|1...   186   6e-45
ref|XP_002280460.1| PREDICTED: 17.9 kDa class II heat shock prot...   185   1e-44

>gb|AAD41409.1|AF159562_1 cytosolic class II low molecular weight heat shock protein [Prunus
           dulcis]
          Length = 156

 Score =  191 bits (485), Expect = 2e-46
 Identities = 96/125 (76%), Positives = 106/125 (84%)
 Frame = -3

Query: 602 DAPLFSTLHQMMDMSDESDKSNNAPTRTYVRDAKAMAATPADIKEYPNSYSFVIDMPGLK 423
           D+PLFSTL  +MD +DE DKS NAPTRTYVRDAKAMA+TPAD+KEYPNSY FV+DMPGLK
Sbjct: 9   DSPLFSTLQHIMDFTDEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVFVVDMPGLK 68

Query: 422 SSDIKVQLEADNVLVITXXXXXXXXXXGAKYLRIERRVGKFMRKFTLPENANVEAISAVC 243
           S DIKVQ+E DNVL+IT          GAKY+R+ERRVGKFMRKF LPENANVEAISAVC
Sbjct: 69  SGDIKVQVEDDNVLLITGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANVEAISAVC 128

Query: 242 QDGVL 228
           QDGVL
Sbjct: 129 QDGVL 133


>gb|ACV93250.1| CII small heat shock protein 1 [Prunus salicina]
          Length = 156

 Score =  188 bits (477), Expect = 2e-45
 Identities = 94/125 (75%), Positives = 106/125 (84%)
 Frame = -3

Query: 602 DAPLFSTLHQMMDMSDESDKSNNAPTRTYVRDAKAMAATPADIKEYPNSYSFVIDMPGLK 423
           D+PLFSTL  +MD ++E DKS NAPTRTYVRDAKAMA+TPAD+KEYPNSY FV+DMPGLK
Sbjct: 9   DSPLFSTLQHIMDFNEEPDKSFNAPTRTYVRDAKAMASTPADVKEYPNSYVFVVDMPGLK 68

Query: 422 SSDIKVQLEADNVLVITXXXXXXXXXXGAKYLRIERRVGKFMRKFTLPENANVEAISAVC 243
           S DIKVQ+E DNVL+I+          GAKY+R+ERRVGKFMRKF LPENANVEAISAVC
Sbjct: 69  SGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANVEAISAVC 128

Query: 242 QDGVL 228
           QDGVL
Sbjct: 129 QDGVL 133


>emb|CAN67480.1| hypothetical protein VITISV_004918 [Vitis vinifera]
          Length = 156

 Score =  186 bits (473), Expect = 5e-45
 Identities = 92/125 (73%), Positives = 105/125 (84%)
 Frame = -3

Query: 602 DAPLFSTLHQMMDMSDESDKSNNAPTRTYVRDAKAMAATPADIKEYPNSYSFVIDMPGLK 423
           D+PLFSTL QM+D  D+SDKS NAPTRTYVRDAKAMAATPAD+KEYPNSY+F++DMPGL+
Sbjct: 9   DSPLFSTLQQMLDAGDDSDKSLNAPTRTYVRDAKAMAATPADVKEYPNSYTFIVDMPGLR 68

Query: 422 SSDIKVQLEADNVLVITXXXXXXXXXXGAKYLRIERRVGKFMRKFTLPENANVEAISAVC 243
           S DIKVQ+E  NVLVI+          GAKY+R+ERRVGKFMRKF LPENAN + ISAVC
Sbjct: 69  SGDIKVQVEDGNVLVISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANTDKISAVC 128

Query: 242 QDGVL 228
           QDGVL
Sbjct: 129 QDGVL 133


>ref|XP_002308537.1| predicted protein [Populus trichocarpa] gi|118482686|gb|ABK93262.1|
           unknown [Populus trichocarpa]
           gi|222854513|gb|EEE92060.1| predicted protein [Populus
           trichocarpa]
          Length = 157

 Score =  186 bits (472), Expect = 6e-45
 Identities = 96/126 (76%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
 Frame = -3

Query: 602 DAPLFSTLHQMMDMSD-ESDKSNNAPTRTYVRDAKAMAATPADIKEYPNSYSFVIDMPGL 426
           DAPLF+TL  MMD SD E+DKS NAPTRTYVRDAKAMA+TPAD+KEYP+SY+FVIDMPGL
Sbjct: 9   DAPLFNTLQHMMDASDHEADKSFNAPTRTYVRDAKAMASTPADVKEYPSSYAFVIDMPGL 68

Query: 425 KSSDIKVQLEADNVLVITXXXXXXXXXXGAKYLRIERRVGKFMRKFTLPENANVEAISAV 246
           KS DIKVQ+E DNVLVI+          GAKY+R+ERRVGKFMRKF LPENAN +AISAV
Sbjct: 69  KSGDIKVQVEDDNVLVISGERKRGEEKEGAKYVRMERRVGKFMRKFVLPENANTDAISAV 128

Query: 245 CQDGVL 228
           CQDGVL
Sbjct: 129 CQDGVL 134


>ref|XP_002280460.1| PREDICTED: 17.9 kDa class II heat shock protein [Vitis vinifera]
          Length = 156

 Score =  185 bits (470), Expect = 1e-44
 Identities = 92/125 (73%), Positives = 105/125 (84%)
 Frame = -3

Query: 602 DAPLFSTLHQMMDMSDESDKSNNAPTRTYVRDAKAMAATPADIKEYPNSYSFVIDMPGLK 423
           D+PLFSTL  M+D  ++SDKS NAPTRTYVRDAKAMAATPAD+KEYPN+YSF+IDMPGLK
Sbjct: 9   DSPLFSTLQHMLDAVEDSDKSLNAPTRTYVRDAKAMAATPADVKEYPNAYSFIIDMPGLK 68

Query: 422 SSDIKVQLEADNVLVITXXXXXXXXXXGAKYLRIERRVGKFMRKFTLPENANVEAISAVC 243
           S DIKVQ+E DNVL+I+          GAKY+R+ERRVGKFMRKF LPENAN + ISAVC
Sbjct: 69  SGDIKVQVEDDNVLMISGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANTDKISAVC 128

Query: 242 QDGVL 228
           QDGVL
Sbjct: 129 QDGVL 133


Top