BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007631
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   204   8e-51
ref|XP_002317685.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
gb|ABK93409.1| unknown [Populus trichocarpa]                          199   2e-49
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot...   199   3e-49
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab...   199   3e-49

>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
           [Vitis vinifera] gi|147774905|emb|CAN61706.1|
           hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  204 bits (518), Expect = 8e-51
 Identities = 108/167 (64%), Positives = 113/167 (67%)
 Frame = +2

Query: 26  MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNE 205
           MSMSKSSKMLQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNE
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNE 60

Query: 206 EREDXXXXXXXXXXXXXXXSMTVEGPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 385
           ERE+               SMTVEGPPPP                               
Sbjct: 61  EREERRTLGLVLLRGEEVISMTVEGPPPP-------------------EESRAKAVGAAA 101

Query: 386 XXXXXXXXAAGRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISR 526
                   AAGRGIPTAPL+QAQPGL+GPVRG+GGPAPGMMQPQISR
Sbjct: 102 MAGPGIGRAAGRGIPTAPLIQAQPGLAGPVRGVGGPAPGMMQPQISR 148


>ref|XP_002317685.1| predicted protein [Populus trichocarpa] gi|222860750|gb|EEE98297.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  199 bits (506), Expect = 2e-49
 Identities = 108/168 (64%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
 Frame = +2

Query: 26  MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK-N 202
           MSMSKSSKMLQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKGKK N
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60

Query: 203 EEREDXXXXXXXXXXXXXXXSMTVEGPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 382
           EERED               SMTVEGPPPP                              
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPP-------------------EESRAKAVSAA 101

Query: 383 XXXXXXXXXAAGRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISR 526
                    AAGRGIPTAPLVQAQPGL+GPVRG+GGP+PGMMQPQ+SR
Sbjct: 102 AVAGPGLGRAAGRGIPTAPLVQAQPGLAGPVRGVGGPSPGMMQPQLSR 149


>gb|ABK93409.1| unknown [Populus trichocarpa]
          Length = 286

 Score =  199 bits (506), Expect = 2e-49
 Identities = 108/168 (64%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
 Frame = +2

Query: 26  MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK-N 202
           MSMSKSSKMLQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKGKK N
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60

Query: 203 EEREDXXXXXXXXXXXXXXXSMTVEGPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 382
           EERED               SMTVEGPPPP                              
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPP-------------------EESRAKAVSAA 101

Query: 383 XXXXXXXXXAAGRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISR 526
                    AAGRGIPTAPLVQAQPGL+GPVRG+GGP+PGMMQPQ+SR
Sbjct: 102 AVAGPGLGRAAGRGIPTAPLVQAQPGLAGPVRGVGGPSPGMMQPQLSR 149


>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|30685110|ref|NP_849414.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
           protein [Arabidopsis thaliana]
           gi|7268840|emb|CAB79044.1| putative snRNP protein
           [Arabidopsis thaliana] gi|28393634|gb|AAO42236.1|
           putative snRNP protein [Arabidopsis thaliana]
           gi|28827492|gb|AAO50590.1| putative snRNP protein
           [Arabidopsis thaliana] gi|222423490|dbj|BAH19715.1|
           AT4G20440 [Arabidopsis thaliana]
           gi|332658930|gb|AEE84330.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658931|gb|AEE84331.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658932|gb|AEE84332.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658933|gb|AEE84333.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana]
          Length = 257

 Score =  199 bits (505), Expect = 3e-49
 Identities = 108/168 (64%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 26  MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK-N 202
           MSMSKSSKMLQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKGKK N
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60

Query: 203 EEREDXXXXXXXXXXXXXXXSMTVEGPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 382
           EERED               SMTVEGPPPP                              
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPP-------------------EESRAKAGSAA 101

Query: 383 XXXXXXXXXAAGRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISR 526
                    AAGRG+PT PLVQAQPGLSGPVRG+GGPAPGMMQPQISR
Sbjct: 102 AVAGPGIGRAAGRGVPTGPLVQAQPGLSGPVRGVGGPAPGMMQPQISR 149


>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
           lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
           ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  199 bits (505), Expect = 3e-49
 Identities = 108/168 (64%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 26  MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK-N 202
           MSMSKSSKMLQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKGKK N
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60

Query: 203 EEREDXXXXXXXXXXXXXXXSMTVEGPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 382
           EERED               SMTVEGPPPP                              
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPP-------------------EESRAKAGSAA 101

Query: 383 XXXXXXXXXAAGRGIPTAPLVQAQPGLSGPVRGIGGPAPGMMQPQISR 526
                    AAGRG+PT PLVQAQPGLSGPVRG+GGPAPGMMQPQISR
Sbjct: 102 AVAGPGIGRAAGRGVPTGPLVQAQPGLSGPVRGVGGPAPGMMQPQISR 149