BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007615
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...   185   1e-44
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...   180   4e-43
gb|ABK93461.1| unknown [Populus trichocarpa]                          180   4e-43
ref|XP_003523107.1| PREDICTED: tRNA-splicing endonuclease subuni...   178   1e-42
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...   176   5e-42

>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score =  185 bits (469), Expect = 1e-44
 Identities = 93/162 (57%), Positives = 117/162 (72%), Gaps = 4/162 (2%)
 Frame = +1

Query: 1   YELSLEEAFYLCHSLKCLEIVWRDKCLQNDQ-LWEFMTSRRKLFPIFYKAYSHLRAKNWV 177
           ++LS+EEAFYLCHSL CL+IV  D  L+ND+ LW++M SRR+ FP FY AYSHLR KNWV
Sbjct: 75  FQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRETFPDFYMAYSHLRIKNWV 134

Query: 178 VKSDIKYGVDFVVYRHHPSLVHSEYAVIVL-EGNEDIT-RFMAWPSLHATLRLEDGVAKT 351
           V+S  +YGVDFV YRHHP+LVHSEYAV+VL E NE+   R   W     T+RL   VAKT
Sbjct: 135 VRSGSQYGVDFVAYRHHPALVHSEYAVLVLSEENENANGRLRVWSDFDCTIRLCGSVAKT 194

Query: 352 LLLLHIS-NVHDRVSSSCFEHYTVQEQIIARWNPEQCHEEHT 474
           LL++HI+ N H   +  C + Y+V+E+ I RW+ EQC E  T
Sbjct: 195 LLVIHINKNGHGATTPLCLKKYSVEERTITRWSAEQCREVQT 236



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 42/81 (51%), Positives = 58/81 (71%)
 Frame = +1

Query: 607 LNTRWKGKGSKAIALANPMSKIVAXXXXXXXXXKACGLLAGFAVLLQVGLEQADLLNRAC 786
           +  RWKGKG++A ALA PMS+IV+          + GLL+G +VLL+ G EQ +LLNR+C
Sbjct: 1   MGPRWKGKGAEAKALAEPMSEIVSQLQSSLTRSDSQGLLSGCSVLLEAGAEQTELLNRSC 60

Query: 787 FGHPIITDNEDNQWYELSLEE 849
           FG P+IT  +D QW++LS+EE
Sbjct: 61  FGRPVITAEKDKQWFQLSMEE 81


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  180 bits (456), Expect = 4e-43
 Identities = 88/162 (54%), Positives = 113/162 (69%), Gaps = 2/162 (1%)
 Frame = +1

Query: 1   YELSLEEAFYLCHSLKCLEIVWRDKCLQND-QLWEFMTSRRKLFPIFYKAYSHLRAKNWV 177
           ++L LEEAFYLC+SLKCL+I   D  ++ND  LW +M  +++ FP FYKAYSHLR KNWV
Sbjct: 75  FQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPDFYKAYSHLRMKNWV 134

Query: 178 VKSDIKYGVDFVVYRHHPSLVHSEYAVIVLEGNEDITRFMAWPSLHATLRLEDGVAKTLL 357
           ++  ++YGVDFV Y+HHPSLVHSEYAVIVL    D  R   W   H T+RL   VAKTLL
Sbjct: 135 LRPGLQYGVDFVAYQHHPSLVHSEYAVIVL-SEGDTGRLRVWSDFHCTIRLCGSVAKTLL 193

Query: 358 LLHI-SNVHDRVSSSCFEHYTVQEQIIARWNPEQCHEEHTTS 480
           +L++  N H  +S SC E Y+V+E  I RW+PEQ  ++   S
Sbjct: 194 ILNVDKNGHGAISPSCLERYSVEECTITRWSPEQSRDDKKAS 235



 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 42/81 (51%), Positives = 55/81 (67%)
 Frame = +1

Query: 607 LNTRWKGKGSKAIALANPMSKIVAXXXXXXXXXKACGLLAGFAVLLQVGLEQADLLNRAC 786
           +  RWKGKG++A ALA+PMS+IV+          AC  L+G +VLL V  EQ +LL RAC
Sbjct: 1   MGPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEQTELLTRAC 60

Query: 787 FGHPIITDNEDNQWYELSLEE 849
           FG PIIT  ++ QW++L LEE
Sbjct: 61  FGKPIITAEKEKQWFQLGLEE 81


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  180 bits (456), Expect = 4e-43
 Identities = 88/162 (54%), Positives = 113/162 (69%), Gaps = 2/162 (1%)
 Frame = +1

Query: 1   YELSLEEAFYLCHSLKCLEIVWRDKCLQND-QLWEFMTSRRKLFPIFYKAYSHLRAKNWV 177
           ++L LEEAFYLC+SLKCL+I   D  ++ND  LW +M  +++ FP FYKAYSHLR KNWV
Sbjct: 75  FQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPDFYKAYSHLRMKNWV 134

Query: 178 VKSDIKYGVDFVVYRHHPSLVHSEYAVIVLEGNEDITRFMAWPSLHATLRLEDGVAKTLL 357
           ++  ++YGVDFV Y+HHPSLVHSEYAVIVL    D  R   W   H T+RL   VAKTLL
Sbjct: 135 LRPGLQYGVDFVAYQHHPSLVHSEYAVIVL-SEGDTGRLRVWSDFHCTIRLCGSVAKTLL 193

Query: 358 LLHI-SNVHDRVSSSCFEHYTVQEQIIARWNPEQCHEEHTTS 480
           +L++  N H  +S SC E Y+V+E  I RW+PEQ  ++   S
Sbjct: 194 ILNVDKNGHGAISPSCLERYSVEECTITRWSPEQSRDDKKAS 235



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 41/81 (50%), Positives = 55/81 (67%)
 Frame = +1

Query: 607 LNTRWKGKGSKAIALANPMSKIVAXXXXXXXXXKACGLLAGFAVLLQVGLEQADLLNRAC 786
           +  RWKGKG++A ALA+PMS+IV+          AC  L+G +VLL V  E+ +LL RAC
Sbjct: 1   MGPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEKTELLTRAC 60

Query: 787 FGHPIITDNEDNQWYELSLEE 849
           FG PIIT  ++ QW++L LEE
Sbjct: 61  FGKPIITAEKEKQWFQLGLEE 81


>ref|XP_003523107.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Glycine
           max]
          Length = 255

 Score =  178 bits (452), Expect = 1e-42
 Identities = 93/173 (53%), Positives = 115/173 (66%), Gaps = 10/173 (5%)
 Frame = +1

Query: 1   YELSLEEAFYLCHSLKCLEIV--WRDKCLQNDQ-LWEFMTSRRKLFPIFYKAYSHLRAKN 171
           ++LS EEAFYLC+SLKCL+I     D   Q D+ LW +M S+++ FP FYKAYSHLR KN
Sbjct: 81  FQLSFEEAFYLCYSLKCLKINNDSDDTSSQTDEELWHYMKSKKETFPCFYKAYSHLRMKN 140

Query: 172 WVVKSDIKYGVDFVVYRHHPSLVHSEYAVIVLEGNEDIT---RFMAWPSLHATLRLEDGV 342
           WVV+S  +YG DFVVYRHHP+ VHSEY V+VL   ED     R   W  +H T RL  GV
Sbjct: 141 WVVRSGAQYGADFVVYRHHPARVHSEYGVLVLSDEEDKDLNGRLRVWSDVHCTTRLLGGV 200

Query: 343 AKTLLLLHIS-NVHDRVSSSCFEHYTVQEQIIARWNPEQCHEE---HTTSDTG 489
           AK LL+L+++ N     S  C  +YTV+E+ I RWNPEQC E+   H  SD G
Sbjct: 201 AKILLVLYVNRNGGSNESPLCLANYTVEERTITRWNPEQCREKMVVHANSDNG 253



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
 Frame = +1

Query: 616 RWKGKGSKAI------ALANPMSKIVAXXXXXXXXXKACGLLAGFAVLLQVGLEQADLLN 777
           RWKGK +KA       AL  PMSKIV+            G L+G +V L V  EQ  LL+
Sbjct: 4   RWKGKDAKAKKDAQAEALKEPMSKIVSQIQSSLVQSDTRGFLSGSSVHLVVEAEQLHLLD 63

Query: 778 RACFGHPIITDNEDNQWYELSLEE 849
           +ACFG P+ T  +D   ++LS EE
Sbjct: 64  KACFGSPVRTVEKDKPRFQLSFEE 87


>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
           communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
           endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score =  176 bits (447), Expect = 5e-42
 Identities = 90/160 (56%), Positives = 111/160 (69%), Gaps = 5/160 (3%)
 Frame = +1

Query: 1   YELSLEEAFYLCHSLKCLEIVWRDKCLQND-QLWEFMTSRRKLFPIFYKAYSHLRAKNWV 177
           ++L +EEAFYL +SLKC++IV  D C  +D +LW+FM S++  FP FYKAYSHLR KNWV
Sbjct: 75  FQLGIEEAFYLSYSLKCIKIVSEDNCCISDLELWQFMKSQKPTFPDFYKAYSHLRMKNWV 134

Query: 178 VKSDIKYGVDFVVYRHHPSLVHSEYAVIVLEGNEDIT---RFMAWPSLHATLRLEDGVAK 348
           V+   +YGVDFV YRHHPSLVHSEYAV+VL   ED     R   W   H TLRL   VAK
Sbjct: 135 VRPGSQYGVDFVAYRHHPSLVHSEYAVLVL-SEEDANANGRLRVWSDFHCTLRLCGSVAK 193

Query: 349 TLLLLHIS-NVHDRVSSSCFEHYTVQEQIIARWNPEQCHE 465
           TLL+L I+ N H     SC E Y+V+E+  ARW+P+Q  E
Sbjct: 194 TLLVLGINKNCHGTTLPSCLEKYSVEERTFARWSPQQSRE 233



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 43/81 (53%), Positives = 56/81 (69%)
 Frame = +1

Query: 607 LNTRWKGKGSKAIALANPMSKIVAXXXXXXXXXKACGLLAGFAVLLQVGLEQADLLNRAC 786
           + TRWKGKGS+A A A+PMSKI++          A GLL+G +VLL V  EQ +LL RAC
Sbjct: 1   MGTRWKGKGSEAKAAADPMSKIISQLCSSLIQFDAHGLLSGCSVLLAVESEQTELLTRAC 60

Query: 787 FGHPIITDNEDNQWYELSLEE 849
           FG P+IT  +D QW++L +EE
Sbjct: 61  FGRPMITSEKDKQWFQLGIEE 81