BLASTX nr result

ID: Coptis21_contig00007594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007594
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321997.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002317781.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
emb|CBI23014.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002272529.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis v...    87   1e-15
ref|XP_003544046.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine...    85   7e-15

>ref|XP_002321997.1| predicted protein [Populus trichocarpa] gi|222868993|gb|EEF06124.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 6/94 (6%)
 Frame = +2

Query: 11  RHLGTMEGSYVALRNA------DNISEKTVEMDMITPSGADTVNMTRFGRNTVDSVPITA 172
           R LG  EGSYV L         D++SEKTVEMDM+TP+G    NM       +D+   + 
Sbjct: 287 RQLGPNEGSYVTLNTTTATATTDDMSEKTVEMDMVTPTGTSNSNM-----GILDANLSSN 341

Query: 173 RQQRQMGSENVPSYMAPTQSAKAKVRSQGEAKQR 274
           R QRQ+ S NVPSYMAPTQSAKAKVRSQG  KQ+
Sbjct: 342 RHQRQLSSSNVPSYMAPTQSAKAKVRSQGSTKQQ 375


>ref|XP_002317781.1| predicted protein [Populus trichocarpa] gi|222858454|gb|EEE96001.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
 Frame = +2

Query: 11  RHLGTMEGSYVALRNA------DNISEKTVEMDMITPSGADTVNMTRFGRNTVDSVPITA 172
           R  G  EGSYV +         +++SEKTVEMDM+TP+G    NM       +D+ P + 
Sbjct: 294 RQSGPNEGSYVTVNTTTTTTTTEDMSEKTVEMDMVTPTGTSNPNM-----GMLDTNPYSN 348

Query: 173 RQQRQMGSENVPSYMAPTQSAKAKVRSQGEAKQRPIAAYQWNPSPK 310
           R Q Q  S NV SYMAPTQSAKAKVRSQ   KQR  A   WNPS K
Sbjct: 349 RPQWQSSSSNVRSYMAPTQSAKAKVRSQSLIKQRAPATPLWNPSTK 394


>emb|CBI23014.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
 Frame = +2

Query: 35  SYVALRNADNISEKTVEMDMITPSGADTVNMTRFGRNTVDSVPIT----ARQQRQMGSEN 202
           SY+ L   DN+SEKTVEMD+I+P G D +   + G++ V     T     RQ +Q  S+N
Sbjct: 314 SYMTLPTTDNMSEKTVEMDVISPPGLDNIYTGQHGQHVVGDSFRTPTDPTRQLKQPSSDN 373

Query: 203 VPSYMAPTQSAKAKVRSQGEAKQRPIAAY-QWNPSPK 310
           VPSYMAPT+S +AK R+QG  K RP     QWNPS K
Sbjct: 374 VPSYMAPTKSTRAKFRAQGPTKPRPAPQMPQWNPSTK 410


>ref|XP_002272529.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]
          Length = 466

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
 Frame = +2

Query: 35  SYVALRNADNISEKTVEMDMITPSGADTVNMTRFGRNTVDSVPIT----ARQQRQMGSEN 202
           SY+ L   DN+SEKTVEMD+I+P G D +   + G++ V     T     RQ +Q  S+N
Sbjct: 302 SYMTLPTTDNMSEKTVEMDVISPPGLDNIYTGQHGQHVVGDSFRTPTDPTRQLKQPSSDN 361

Query: 203 VPSYMAPTQSAKAKVRSQGEAKQRPIAAY-QWNPSPK 310
           VPSYMAPT+S +AK R+QG  K RP     QWNPS K
Sbjct: 362 VPSYMAPTKSTRAKFRAQGPTKPRPAPQMPQWNPSTK 398


>ref|XP_003544046.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]
          Length = 464

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
 Frame = +2

Query: 11  RHLGTMEGSYVALRNA-----DNISEKTVEMDMI-TPSGADTVNMTRFGRNTVDSVPITA 172
           R++G  E SY+ L +      DN+SEKTVEMDM+ TP   +T N++   ++ VD  P++ 
Sbjct: 302 RNMGPHETSYMTLASTTSTTTDNMSEKTVEMDMVATPGPTNTRNVSPMNQDFVDLSPVSN 361

Query: 173 RQQRQMGSENVPSYMAPTQSAKAKVRSQGEAKQRPIAAYQWNPSPK 310
           R +    S N PSYM PTQSAKAKVR+QG +K R ++  QWN S K
Sbjct: 362 RHRHIPPSPNRPSYMTPTQSAKAKVRAQGPSKPR-VSVGQWNFSTK 406


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