BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007590
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266380.1| PREDICTED: ATP-dependent Clp protease proteo...   453   e-125
ref|XP_003525778.1| PREDICTED: ATP-dependent Clp protease proteo...   434   e-119
ref|XP_004147568.1| PREDICTED: ATP-dependent Clp protease proteo...   431   e-118
ref|XP_003549891.1| PREDICTED: ATP-dependent Clp protease proteo...   428   e-117
ref|XP_002509628.1| ATP-dependent Clp protease proteolytic subun...   413   e-113

>ref|XP_002266380.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic [Vitis vinifera]
           gi|147794105|emb|CAN62361.1| hypothetical protein
           VITISV_031921 [Vitis vinifera]
           gi|297742668|emb|CBI34817.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  453 bits (1165), Expect = e-125
 Identities = 222/291 (76%), Positives = 258/291 (88%), Gaps = 1/291 (0%)
 Frame = +1

Query: 103 MALSLHSTGSSCLQSRNGITASQSSLSCATQVFVGLKSQSTSSFGSYKPNMSVQFHDRVH 282
           MA+ LHST SS     +    SQ  LSCAT++F GLK QS S+FG+ KPN++V+F ++VH
Sbjct: 1   MAVHLHSTPSSSSSLHSRTRVSQPPLSCATKLFSGLKLQSASTFGTGKPNLTVEFFNKVH 60

Query: 283 KSLHFRTSN-KATRAQIRMMPIGVPRVPYRTPGEGTWQWVDLWNALYRERVIFIGDHINE 459
           KS+  RTS+ K+TRA++RMMPIG PRVPYRTPGEGTWQWVDLWNALYRERVI+IG HI+E
Sbjct: 61  KSVQSRTSDSKSTRARVRMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIYIGQHIDE 120

Query: 460 ELSNQILATMLYLDSIDSSKKIYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAYN 639
           E SNQ+LATMLYLDSI+SSK+++ YIN PGGDLTPSL+IYDTMQSLKSPV T+C+G+AYN
Sbjct: 121 EFSNQLLATMLYLDSIESSKRMFFYINSPGGDLTPSLAIYDTMQSLKSPVGTNCLGFAYN 180

Query: 640 LAGFLLAAGEKGNRVAMPLSRIALESPAGAARGQADDIENEATELIRIRDYLFKELSKKT 819
           LA FLLAAGEKGNR+AMPLSRIAL+SPAGAARGQADDI NEA EL+RIRDYLF EL+ KT
Sbjct: 181 LATFLLAAGEKGNRLAMPLSRIALQSPAGAARGQADDIRNEANELLRIRDYLFSELANKT 240

Query: 820 GQPIEKINKDLSRMKRFNAQEALEYGLIDRIIRPPRIKADAPQKEAGTGLG 972
           GQPI+KINKDL RMKRFNAQEALEYGLIDRI+RPPR+KADAP+K+AGTGLG
Sbjct: 241 GQPIDKINKDLRRMKRFNAQEALEYGLIDRILRPPRVKADAPRKDAGTGLG 291


>ref|XP_003525778.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic-like [Glycine max]
          Length = 312

 Score =  434 bits (1115), Expect = e-119
 Identities = 215/292 (73%), Positives = 253/292 (86%), Gaps = 1/292 (0%)
 Frame = +1

Query: 100 TMALSLHSTGSSCLQSRNGITASQSSLSCATQVFVGLKSQSTSSFGSYKPNMSVQFHDRV 279
           +MA+  ++TGS+ L S        S+ S AT+++ GLK Q+ S FG+ KPN++ +F+ +V
Sbjct: 27  SMAVVPYTTGSAPLLS------PPSTSSVATKLYSGLKLQAASPFGAAKPNVTAEFYGKV 80

Query: 280 HKSLHFRTSNKATR-AQIRMMPIGVPRVPYRTPGEGTWQWVDLWNALYRERVIFIGDHIN 456
           H +LH R +N  T  A+IRMMPIG P+VPYRTPGEGTWQWVD+WNALYRERVIFIG  I+
Sbjct: 81  HNTLHCRYANHNTSMARIRMMPIGTPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEID 140

Query: 457 EELSNQILATMLYLDSIDSSKKIYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAY 636
           EE SNQILATMLYLDSI++SKK+Y+YINGPGGDLTPS++IYDTMQSL+SPV THCVGYAY
Sbjct: 141 EEFSNQILATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAY 200

Query: 637 NLAGFLLAAGEKGNRVAMPLSRIALESPAGAARGQADDIENEATELIRIRDYLFKELSKK 816
           +LA FLLAAGEKGNR AMPLSR+AL SPAGAARGQADDI+NEA EL+RIRDYLF EL++K
Sbjct: 201 SLAAFLLAAGEKGNRSAMPLSRVALTSPAGAARGQADDIQNEANELLRIRDYLFNELAQK 260

Query: 817 TGQPIEKINKDLSRMKRFNAQEALEYGLIDRIIRPPRIKADAPQKEAGTGLG 972
           TGQP+EKI KDLSRMKRFNAQEALEYGLIDRI+RPPRIKADAP+KEAGTGLG
Sbjct: 261 TGQPVEKITKDLSRMKRFNAQEALEYGLIDRIVRPPRIKADAPRKEAGTGLG 312


>ref|XP_004147568.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic-like [Cucumis sativus]
           gi|449523577|ref|XP_004168800.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic-like [Cucumis sativus]
          Length = 285

 Score =  431 bits (1108), Expect = e-118
 Identities = 210/284 (73%), Positives = 247/284 (86%), Gaps = 1/284 (0%)
 Frame = +1

Query: 124 TGSSCLQSRNGITASQSSLSCATQVFVGLKSQSTSSFGSYKPNMSVQFHDRVHKSLHFRT 303
           T   CLQ +  I  SQ SLS AT+V+ GLK QS S FG  KPN++ +F+ +VHKSL  RT
Sbjct: 4   TSIPCLQPQ--IKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTRT 61

Query: 304 SNK-ATRAQIRMMPIGVPRVPYRTPGEGTWQWVDLWNALYRERVIFIGDHINEELSNQIL 480
           +NK A RAQ +MMPIG PRVPY+TPGEG WQWVDLWNALYRERVIFIGD+++EE SNQIL
Sbjct: 62  NNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQIL 121

Query: 481 ATMLYLDSIDSSKKIYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAYNLAGFLLA 660
           ATMLYLDS+++SKK+Y+YINGPGGDLTP+L++YDTMQSLKSP+ THC+G AYN+A FLLA
Sbjct: 122 ATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLA 181

Query: 661 AGEKGNRVAMPLSRIALESPAGAARGQADDIENEATELIRIRDYLFKELSKKTGQPIEKI 840
           AGEKGNR AMPLSRIAL+SPAG+ARG+ADDI+NEA +L++IRDYLF ELSKKTGQP+EKI
Sbjct: 182 AGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKI 241

Query: 841 NKDLSRMKRFNAQEALEYGLIDRIIRPPRIKADAPQKEAGTGLG 972
           +KDLS  KRFNAQ+ALEYGLIDRI RP RIKADAP+K+ GTGLG
Sbjct: 242 HKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 285


>ref|XP_003549891.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 2, chloroplastic-like [Glycine max]
          Length = 285

 Score =  428 bits (1101), Expect = e-117
 Identities = 213/291 (73%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
 Frame = +1

Query: 103 MALSLHSTGSSCLQSRNGITASQSSLSCATQVFVGLKSQSTSSFGSYKPNMSVQFHDRVH 282
           MA++ ++TGS+   S         + S AT+++ GLK Q+ SSF + +PN++ +F+ +VH
Sbjct: 1   MAVAPYTTGSAPRFS------PPPTSSVATKLYSGLKLQAASSFRAARPNVTAEFYGKVH 54

Query: 283 KSLHFRTSN-KATRAQIRMMPIGVPRVPYRTPGEGTWQWVDLWNALYRERVIFIGDHINE 459
            +LH R +N   + A+IRMMPIG P+VPYRTPGEGTWQWVD+WNALYRERVIFIG  I+E
Sbjct: 55  NTLHCRYANHNPSMARIRMMPIGTPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDE 114

Query: 460 ELSNQILATMLYLDSIDSSKKIYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAYN 639
           E SNQILATMLYLDSID+SKK+Y+YINGPGGDLTPS++IYDTMQSL+SPV THCVGYAY+
Sbjct: 115 EFSNQILATMLYLDSIDNSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYS 174

Query: 640 LAGFLLAAGEKGNRVAMPLSRIALESPAGAARGQADDIENEATELIRIRDYLFKELSKKT 819
           LA FLLAAGEK NR AMPLSR+AL SPAGAARGQADDI+NEA EL+RIRDYLF ELSKKT
Sbjct: 175 LAAFLLAAGEKSNRSAMPLSRVALTSPAGAARGQADDIQNEANELLRIRDYLFNELSKKT 234

Query: 820 GQPIEKINKDLSRMKRFNAQEALEYGLIDRIIRPPRIKADAPQKEAGTGLG 972
           GQP+EKI KDLSRMKRFNAQEALEYGLIDRI+RPPRIKADAP+KEAGTGLG
Sbjct: 235 GQPLEKITKDLSRMKRFNAQEALEYGLIDRIVRPPRIKADAPRKEAGTGLG 285


>ref|XP_002509628.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
           communis] gi|223549527|gb|EEF51015.1| ATP-dependent Clp
           protease proteolytic subunit, putative [Ricinus
           communis]
          Length = 279

 Score =  413 bits (1061), Expect = e-113
 Identities = 201/270 (74%), Positives = 234/270 (86%), Gaps = 1/270 (0%)
 Frame = +1

Query: 166 SQSSLSCATQVFVGLKSQSTSSFGSYKPNMSVQFHDRVHKSLHFRT-SNKATRAQIRMMP 342
           +Q SLSC T+++ GLK QS S + + +PN++ +F+ RV+KSL   T S+ A  A +RMMP
Sbjct: 10  NQPSLSCGTKLYSGLKLQSPSLYATGRPNLTAEFYGRVNKSLQCGTRSHSAIHAGVRMMP 69

Query: 343 IGVPRVPYRTPGEGTWQWVDLWNALYRERVIFIGDHINEELSNQILATMLYLDSIDSSKK 522
           IG PRVPYRTPGEGTWQWVDLWNALYRERVIFIG +I+EE SNQILATMLYLD+ID +K+
Sbjct: 70  IGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDTIDDNKR 129

Query: 523 IYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAYNLAGFLLAAGEKGNRVAMPLSR 702
           IY YINGPGGDLTP+L+IYDTMQSLKSPV THCVG+AYNLAGF+LAAGEKGNR AMPLSR
Sbjct: 130 IYFYINGPGGDLTPTLAIYDTMQSLKSPVGTHCVGFAYNLAGFILAAGEKGNRSAMPLSR 189

Query: 703 IALESPAGAARGQADDIENEATELIRIRDYLFKELSKKTGQPIEKINKDLSRMKRFNAQE 882
           IAL+SPAGAARGQADDI NEA EL+RI+DYL+ EL+KKTGQP EKINKDLSRMKRFNAQE
Sbjct: 190 IALQSPAGAARGQADDIRNEANELLRIKDYLYNELAKKTGQPAEKINKDLSRMKRFNAQE 249

Query: 883 ALEYGLIDRIIRPPRIKADAPQKEAGTGLG 972
           AL+YGLIDRIIRPP + AD+  ++   GLG
Sbjct: 250 ALDYGLIDRIIRPPAVDADSAPRDPSAGLG 279