BLASTX nr result

ID: Coptis21_contig00007564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007564
         (2524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38754.3| unnamed protein product [Vitis vinifera]              351   6e-94
emb|CBI28055.3| unnamed protein product [Vitis vinifera]              335   4e-89
ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vi...   320   2e-84
ref|XP_002516567.1| myb, putative [Ricinus communis] gi|22354438...   317   1e-83
emb|CBI20887.3| unnamed protein product [Vitis vinifera]              315   5e-83

>emb|CBI38754.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  351 bits (900), Expect = 6e-94
 Identities = 250/605 (41%), Positives = 325/605 (53%), Gaps = 8/605 (1%)
 Frame = +3

Query: 291  RTTGPTRRSTKGGWTEQEDDMLTKAVQQFKGKNWKKIAEYFPQRSDVQCLHRWQKVLNPD 470
            R TGP RRSTKG WTEQ+D +L  AV +FKGKNWKKIAE     +DVQCLHRWQKVL+P+
Sbjct: 20   RVTGPARRSTKGFWTEQKDRVLAYAVNKFKGKNWKKIAECVTGTTDVQCLHRWQKVLDPN 79

Query: 471  LVKGPWTKEEDDCIMELVKKHGSKKWSVIAQSLPGRIGKQCRERWHNHLNPAIKKHAWTK 650
            LVKGPWTKEEDD I+ELV K G+KKW+ +A+ L GRIGKQCRERWHNHLNPAI K  WTK
Sbjct: 80   LVKGPWTKEEDDLIIELVGKQGNKKWAEVAKCLTGRIGKQCRERWHNHLNPAINKAPWTK 139

Query: 651  EEELALIRAHQIYGNKWAEIAKFLPGRADNSIKNHWNCSVKKKLDSYLVSGFDGDLLGLN 830
            EEEL LI+AHQ YGNKWAEIAK LPGR +NSIKNHWNCS+KK+L +   S F       N
Sbjct: 140  EEELVLIQAHQKYGNKWAEIAKILPGRTENSIKNHWNCSLKKRL-NLNASAFHLPGFPTN 198

Query: 831  SYDFYNLEMKADSVKVNVSNSDAEIVCSHDPKEESDDGVDTSLAVSVLGISDGERKDRQS 1010
            + D   +E + ++    V         S D + ES   VDT L ++V G S G    ++S
Sbjct: 199  NLDSLKMERETENGATQVVKQSLGTTFSLDKQMESQSSVDTHLDLAV-GYSSG----KES 253

Query: 1011 HSQPIQVENSCL--KEEIDSQEESLNGNKIECRSPIPR-GMNSEFGGEDADYASTSEDFH 1181
            H  P +  N     +E I   +       I  +  +P   + S    + A     S D H
Sbjct: 254  HLPPFKKVNCRFPKREAIGPMKPPF--QTIFDKKEVPECDLASGRCQDSAVNDKPSRDPH 311

Query: 1182 -HSIEMDVSRGISSYDSMMIRHSRENTCEPLGLSINSPRHPGELSLATPSLSGLLDVKG- 1355
              + +++ S  IS  D + + HS +          +SP  P       PS +  LD  G 
Sbjct: 312  IKANKLNESCSISLRDQLTLWHSAKP-------GEHSPPLP-HSGCIPPSSNSPLDEIGC 363

Query: 1356 -GRNKCQYPDRAIPVTTKRIPESPKRPRHYAPPLNEYGDMNSESSNERYNLFPSSPLGDF 1532
             G+         +PV+ KR  + PKR        +  G ++S S  +  N FPS+   + 
Sbjct: 364  NGKTNVLPHKMDLPVSAKRSLQPPKRMSKLL-STDSSGAIDSGSRGQSKNFFPSTQTHEV 422

Query: 1533 GNQSGKVRSKVAITPLLCEDKXXXXXXXXXXXXSNPDTSLQNGRYLSTENNKQLVDSLVC 1712
             N + +   K     L  EDK               +T LQ+G +  +++  Q   S V 
Sbjct: 423  -NGTNEHTEKC----LNLEDKNLGGLCYEPLNLEGLNTFLQSGTFPRSDSYIQQSSSPVS 477

Query: 1713 S-TPASPMGSISVNGCTPESILRTAAKNFKNTPSIIRKRVREASKQESNSNESNGVCTPE 1889
            S TPAS    IS +  +PESILR+AA++FKNTPSIIRKR R   + + N+N ++G  T  
Sbjct: 478  SYTPASNGKGISGSCSSPESILRSAARSFKNTPSIIRKRNRTPIETD-NANNNDGTGT-- 534

Query: 1890 VRSGSSNDTQGSAHSCNGQEDLTSKDLLSMNWLSLSSP-SLHNDINASFKSVEKRLEHAF 2066
                              +E   SK L  +  L LS P S   D ++  K VEKRLE+AF
Sbjct: 535  ------------------EEKTDSKVLPKVKQLFLSPPKSQKLDPSSVVKLVEKRLEYAF 576

Query: 2067 DLEWD 2081
            D E D
Sbjct: 577  DKEQD 581


>emb|CBI28055.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  335 bits (859), Expect = 4e-89
 Identities = 241/671 (35%), Positives = 345/671 (51%), Gaps = 50/671 (7%)
 Frame = +3

Query: 270  KLASVQGRTTGPTRRSTKGGWTEQEDDMLTKAVQQFKGKNWKKIAEYFPQRSDVQCLHRW 449
            K+ ++ GRTTGPTRRSTKG WT +ED++L KAVQ+FKGKNWKKIAE F  R+DVQCLHRW
Sbjct: 28   KMRALHGRTTGPTRRSTKGQWTAEEDELLCKAVQRFKGKNWKKIAECFKDRTDVQCLHRW 87

Query: 450  QKVLNPDLVKGPWTKEEDDCIMELVKKHGSKKWSVIAQSLPGRIGKQCRERWHNHLNPAI 629
            QKVLNP+L+KGPW+KEED+ I+ELV K+G KKWS IAQ+LPGRIGKQCRERWHNHLNPAI
Sbjct: 88   QKVLNPELIKGPWSKEEDEIIIELVNKYGPKKWSTIAQALPGRIGKQCRERWHNHLNPAI 147

Query: 630  KKHAWTKEEELALIRAHQIYGNKWAEIAKFLPGRADNSIKNHWNCSVKKKLDSYLVSGFD 809
             K AWT+EEELALI AHQIYGNKWAE+ KFLPGR DN+IKNHWN SVKKKL+SYL SG  
Sbjct: 148  NKEAWTQEEELALIHAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLESYLASGL- 206

Query: 810  GDLLGLNSYDFYNLEMKADSVKVNVSNSDAEIVCSHDPK-----EESDDGVDTSLAVSVL 974
                 L  +  ++ E+   S+ ++VS     +  S  P+       S D   T L  SV 
Sbjct: 207  -----LAQFQSFSHELPGASL-LDVSRESPGL--SGTPQYCISLNGSHDTGPTLLQSSVG 258

Query: 975  GISDGERKDRQSHSQPIQVENSCLKE----EIDSQEESLNGNKIECRSPIPRGMNSE--F 1136
              S    ++    S   ++E+  + E    EI   E  ++GN         R +N+E   
Sbjct: 259  FKSSTSTENILIDSD--KLEHLLISENDYSEITLSEAVIHGNF--------RCVNAENLS 308

Query: 1137 GGEDADYASTSEDFHHSIEMDVSRGISSYDSMMIRHSRENTCEPLGLSINSPRHPGELSL 1316
               D+D  ++S      ++   + G  + +S + + S       LG ++       EL +
Sbjct: 309  NNIDSDGGTSSLHCQSDLQSSATTGSLALESYITQGS------VLGQTL-------ELEI 355

Query: 1317 ATPSLSGLLDV--------KGG----RNKCQYPDRAIPVTTKRIPESPKRPRHYAPPLNE 1460
             T S +  +D+        K G     +K +   + +PV    +  +       +   N+
Sbjct: 356  FTSSCNDFIDIDSPDGETDKAGDHLKLDKAKNAPKLVPVDIFSLANAESMGTLPSMDDNK 415

Query: 1461 YGDMNSESSNERYNLFPSSPLGDFGNQSGKVR-SKVAITPLLCEDKXXXXXXXXXXXXSN 1637
               + S+   +   L P   L    + S + + S    T +L E+K              
Sbjct: 416  SQHLKSDGKKDASGLAPVDLLSSENSDSTQAQPSMDNNTTVLVEEKNSRALFYEPPRFPR 475

Query: 1638 PDTSLQNGRYLSTENNKQ-----------LVDSLVCSTPASPMGSISVNGCTPESILRTA 1784
             D    +   +++ ++ Q           L+ S+  STP S   S    G TP+SIL+ A
Sbjct: 476  LDIPFVSCDLMASGSDMQQEYSPFGIRQLLIPSMNFSTPCSLQDS-PCRGGTPDSILKNA 534

Query: 1785 AKNFKNTPSIIRKRVREASKQESNSNESNGVCTPEVRSG-----SSNDTQG------SAH 1931
            AK+F +TPSI++KR RE     S S ++ G   PE  +       +ND            
Sbjct: 535  AKSFTSTPSILKKRPREV---VSPSEQARGEKNPERETNLLGLFCANDFPSLDVIFYENG 591

Query: 1932 SCNGQEDLTSKDLLSMNWLSLSSPSLHNDINASFKSVEKRLEHAFDLEWD----NSKARC 2099
             CN     T ++ LS ++  ++   +  +      + E R+     ++       +KA+C
Sbjct: 592  PCNPSLSSTERNSLSPHYKKVNLDHVFEEGKEGIANSESRVSEKGKVKQGTNVFGAKAKC 651

Query: 2100 SSATESDSNDG 2132
               T S ++ G
Sbjct: 652  EVDTTSQTHSG 662


>ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vitis vinifera]
          Length = 1051

 Score =  320 bits (819), Expect = 2e-84
 Identities = 173/348 (49%), Positives = 217/348 (62%), Gaps = 30/348 (8%)
 Frame = +3

Query: 270  KLASVQGRTTGPTRRSTKGGWTEQEDDMLTKAVQQFKGKNWKKIAEYFPQRSDVQCLHRW 449
            K+    GRT+GPTRRSTKG WT +ED++L KAVQ++KGKNWKKIAE F  R+DVQCLHRW
Sbjct: 20   KMRPPHGRTSGPTRRSTKGQWTAEEDEILCKAVQRYKGKNWKKIAECFKDRTDVQCLHRW 79

Query: 450  QKVLNPDLVKGPWTKEEDDCIMELVKKHGSKKWSVIAQSLPGRIGKQCRERWHNHLNPAI 629
            QKVLNP+LVKGPW+KEED+ I+ELV K+G+KKWS IAQ LPGRIGKQCRERWHNHLNPAI
Sbjct: 80   QKVLNPELVKGPWSKEEDEVIIELVNKYGAKKWSTIAQHLPGRIGKQCRERWHNHLNPAI 139

Query: 630  KKHAWTKEEELALIRAHQIYGNKWAEIAKFLPGRADNSIKNHWNCSVKKKLDSYLVSGFD 809
             K AWT+EEELAL+RAHQIYGNKWAE+ KFLPGR DN+IKNHWN SVKKKLDSY+ SG  
Sbjct: 140  NKEAWTQEEELALVRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYIASGLL 199

Query: 810  GDLLGLNSYDFYNLEMKADSVKVNVSNSD--------------------AEIVCSHDPKE 929
                GL      N  + + S ++  S+ D                      + CS    E
Sbjct: 200  AQFQGLPLVGHRNQSIHSSSSRMQQSSGDDSGAKGGIEAEEISECSQGSTAVGCSQSVSE 259

Query: 930  ESDDGVDTSLAVSVLGISDGERKDRQSHSQPIQVENSCLKEEIDSQEE-SLNGNKIECRS 1106
             S+ G+ T        +++   + ++  S PI    SC K+   S EE +L+  +I C  
Sbjct: 260  MSNSGLHTR---EEFQMTEESGQGKEQSSSPI----SCSKQYYASIEEVTLSIPEIPCEL 312

Query: 1107 PIPRG-MNSEF-------GGEDADYASTSEDFHHSIEM-DVSRGISSY 1223
              P   +   F       G  +  + S  +    S E+   S G+SS+
Sbjct: 313  DCPSNYLEPNFPHDARISGSVERQFNSNEQPAISSFELGQASSGLSSH 360


>ref|XP_002516567.1| myb, putative [Ricinus communis] gi|223544387|gb|EEF45908.1| myb,
            putative [Ricinus communis]
          Length = 1046

 Score =  317 bits (812), Expect = 1e-83
 Identities = 159/272 (58%), Positives = 192/272 (70%), Gaps = 3/272 (1%)
 Frame = +3

Query: 270  KLASVQGRTTGPTRRSTKGGWTEQEDDMLTKAVQQFKGKNWKKIAEYFPQRSDVQCLHRW 449
            ++  + GRT+GP RRSTKG WT +ED++L KAVQ+FKGKNWKKIAE F  R+DVQCLHRW
Sbjct: 22   RIRPLHGRTSGPARRSTKGQWTAEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRW 81

Query: 450  QKVLNPDLVKGPWTKEEDDCIMELVKKHGSKKWSVIAQSLPGRIGKQCRERWHNHLNPAI 629
            QKVLNP+LVKGPW+KEED+ I+ELV K+G KKWS IAQ LPGRIGKQCRERWHNHLNP+I
Sbjct: 82   QKVLNPELVKGPWSKEEDETIIELVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSI 141

Query: 630  KKHAWTKEEELALIRAHQIYGNKWAEIAKFLPGRADNSIKNHWNCSVKKKLDSYLVSGFD 809
             K AWT++EELALIRAHQIYGN+WAE+ KFLPGR DNSIKNHWN SVKKKLDSYL SG  
Sbjct: 142  NKEAWTQQEELALIRAHQIYGNRWAELTKFLPGRTDNSIKNHWNSSVKKKLDSYLASGLL 201

Query: 810  GDLLGLNSYDFYNLEMKADSVKVNVSNSDAEIVCSHDPKEESD---DGVDTSLAVSVLGI 980
                GL      +  M + S +V  S  D+   C  D +E S+   + +    + S+ G+
Sbjct: 202  EQFQGLPLVP--HQPMPSSSSRVQSSGDDSGFKCGIDAEEISECSQESIVAGCSQSMSGL 259

Query: 981  SDGERKDRQSHSQPIQVENSCLKEEIDSQEES 1076
             +     R+        E S LK+E  S   S
Sbjct: 260  GNAVLPSREEFH---LTEESGLKKERSSSPAS 288


>emb|CBI20887.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  315 bits (806), Expect = 5e-83
 Identities = 151/234 (64%), Positives = 177/234 (75%)
 Frame = +3

Query: 270 KLASVQGRTTGPTRRSTKGGWTEQEDDMLTKAVQQFKGKNWKKIAEYFPQRSDVQCLHRW 449
           K+    GRT+GPTRRSTKG WT +ED++L KAVQ++KGKNWKKIAE F  R+DVQCLHRW
Sbjct: 20  KMRPPHGRTSGPTRRSTKGQWTAEEDEILCKAVQRYKGKNWKKIAECFKDRTDVQCLHRW 79

Query: 450 QKVLNPDLVKGPWTKEEDDCIMELVKKHGSKKWSVIAQSLPGRIGKQCRERWHNHLNPAI 629
           QKVLNP+LVKGPW+KEED+ I+ELV K+G+KKWS IAQ LPGRIGKQCRERWHNHLNPAI
Sbjct: 80  QKVLNPELVKGPWSKEEDEVIIELVNKYGAKKWSTIAQHLPGRIGKQCRERWHNHLNPAI 139

Query: 630 KKHAWTKEEELALIRAHQIYGNKWAEIAKFLPGRADNSIKNHWNCSVKKKLDSYLVSGFD 809
            K AWT+EEELAL+RAHQIYGNKWAE+ KFLPGR DN+IKNHWN SVKKKLDSY+ SG  
Sbjct: 140 NKEAWTQEEELALVRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYIASGLL 199

Query: 810 GDLLGLNSYDFYNLEMKADSVKVNVSNSDAEIVCSHDPKEESDDGVDTSLAVSV 971
               GL    F + E  A S    +  + + +    +   E+ D V   L  SV
Sbjct: 200 AQFQGLPLRQFNSNEQPAIS-SFELGQASSGLSSHFNGGNENRDTVSIPLQTSV 252


Top