BLASTX nr result

ID: Coptis21_contig00007556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007556
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...   446   e-123
emb|CBI37733.3| unnamed protein product [Vitis vinifera]              436   e-120
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin...   436   e-120
ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec...   434   e-119
ref|XP_003545055.1| PREDICTED: glutamate receptor 3.2-like [Glyc...   412   e-113

>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 924

 Score =  446 bits (1148), Expect = e-123
 Identities = 207/303 (68%), Positives = 260/303 (85%)
 Frame = -3

Query: 930  HVLSHVANELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIA 751
            HVLSH+ANEL VPLLSFTA DPTLS LQYP+F+QT+P+D FQMTAIA++V++YGW EVIA
Sbjct: 104  HVLSHLANELHVPLLSFTALDPTLSPLQYPYFVQTAPNDLFQMTAIAEMVSYYGWAEVIA 163

Query: 750  VYTDDDHGRNGISALGDKLAERRCRISYKAALPPDPGATQAEITDALIKVALMESRIIVV 571
            VY+DDD  RNG++ALGDKLAERRCRISYKAALPPDP A ++++ D L+K+  MESR+IV+
Sbjct: 164  VYSDDDQSRNGVTALGDKLAERRCRISYKAALPPDPTANRSDVQDELVKILRMESRVIVL 223

Query: 570  HTYSHSGLMVFDIATHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHT 391
            HT+S +GL+VFD+A  L M++ G+VWIATTWLSTVLDS SPL      S+QGV+T RPHT
Sbjct: 224  HTFSRTGLLVFDVAQSLGMMEKGFVWIATTWLSTVLDSNSPLPSKTANSIQGVITFRPHT 283

Query: 390  PPSEKKKSFFSRWSQLSNGTIGLNPYGLYAYDTVWIIANAVKAFFDKGGTISFSNDSNLH 211
            P S++K+ F SRW++LSNG+IGLNPY LYAYDTVW+IA+A+K FFD+G TISFSNDS L 
Sbjct: 284  PDSKRKRDFESRWNKLSNGSIGLNPYALYAYDTVWMIAHAMKLFFDQGNTISFSNDSKLS 343

Query: 210  KAVGGSLNLAAMTVFDGGKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGF 31
               GG+LNL A+++FDGG +LL +IL TNMTGLTGPIRFNPDRSL+HP+ +++NVI +G+
Sbjct: 344  GLGGGTLNLGALSIFDGGSKLLKNILLTNMTGLTGPIRFNPDRSLLHPSYEIVNVIETGY 403

Query: 30   RQI 22
            +QI
Sbjct: 404  QQI 406


>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  436 bits (1122), Expect = e-120
 Identities = 207/303 (68%), Positives = 258/303 (85%)
 Frame = -3

Query: 930  HVLSHVANELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIA 751
            HVLSH+ANEL VPLLSFTA DP LS LQ+P+F+QT+PSD FQMTAIAD+V+++ WREVIA
Sbjct: 335  HVLSHLANELHVPLLSFTALDPALSPLQFPYFIQTAPSDLFQMTAIADMVSYFEWREVIA 394

Query: 750  VYTDDDHGRNGISALGDKLAERRCRISYKAALPPDPGATQAEITDALIKVALMESRIIVV 571
            VY+DDD  RNGI+ LGDKLAER+C+ISYKAALPPDP AT+ ++ + L+KV +MESR+IV+
Sbjct: 395  VYSDDDQSRNGITTLGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVL 454

Query: 570  HTYSHSGLMVFDIATHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHT 391
            HT S +GL+VFD+A +L M+++GYVWIA+TWLST+LDS +PLS     S+QGVLTLRPHT
Sbjct: 455  HTLSKTGLLVFDVAKYLGMMESGYVWIASTWLSTILDS-TPLSSKTADSIQGVLTLRPHT 513

Query: 390  PPSEKKKSFFSRWSQLSNGTIGLNPYGLYAYDTVWIIANAVKAFFDKGGTISFSNDSNLH 211
            P S+KK+ F SRW+ LSNGTIGLNPYGLYAYDTVW+I  A+K FFD+GGTISFSN ++  
Sbjct: 514  PDSKKKREFSSRWNHLSNGTIGLNPYGLYAYDTVWMITYALKTFFDQGGTISFSNITSGT 573

Query: 210  KAVGGSLNLAAMTVFDGGKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGF 31
              V G LNL A+++FDGG+QLL +ILQ N TGLTGP+RF PDRS +HPA +VINV+G+GF
Sbjct: 574  ALVAGELNLGALSIFDGGQQLLKNILQINRTGLTGPLRFGPDRSPVHPAYEVINVVGTGF 633

Query: 30   RQI 22
            RQ+
Sbjct: 634  RQL 636


>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
          Length = 917

 Score =  436 bits (1122), Expect = e-120
 Identities = 207/303 (68%), Positives = 258/303 (85%)
 Frame = -3

Query: 930  HVLSHVANELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIA 751
            HVLSH+ANEL VPLLSFTA DP LS LQ+P+F+QT+PSD FQMTAIAD+V+++ WREVIA
Sbjct: 105  HVLSHLANELHVPLLSFTALDPALSPLQFPYFIQTAPSDLFQMTAIADMVSYFEWREVIA 164

Query: 750  VYTDDDHGRNGISALGDKLAERRCRISYKAALPPDPGATQAEITDALIKVALMESRIIVV 571
            VY+DDD  RNGI+ LGDKLAER+C+ISYKAALPPDP AT+ ++ + L+KV +MESR+IV+
Sbjct: 165  VYSDDDQSRNGITTLGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVL 224

Query: 570  HTYSHSGLMVFDIATHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHT 391
            HT S +GL+VFD+A +L M+++GYVWIA+TWLST+LDS +PLS     S+QGVLTLRPHT
Sbjct: 225  HTLSKTGLLVFDVAKYLGMMESGYVWIASTWLSTILDS-TPLSSKTADSIQGVLTLRPHT 283

Query: 390  PPSEKKKSFFSRWSQLSNGTIGLNPYGLYAYDTVWIIANAVKAFFDKGGTISFSNDSNLH 211
            P S+KK+ F SRW+ LSNGTIGLNPYGLYAYDTVW+I  A+K FFD+GGTISFSN ++  
Sbjct: 284  PDSKKKREFSSRWNHLSNGTIGLNPYGLYAYDTVWMITYALKTFFDQGGTISFSNITSGT 343

Query: 210  KAVGGSLNLAAMTVFDGGKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGF 31
              V G LNL A+++FDGG+QLL +ILQ N TGLTGP+RF PDRS +HPA +VINV+G+GF
Sbjct: 344  ALVAGELNLGALSIFDGGQQLLKNILQINRTGLTGPLRFGPDRSPVHPAYEVINVVGTGF 403

Query: 30   RQI 22
            RQ+
Sbjct: 404  RQL 406


>ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222849983|gb|EEE87530.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 900

 Score =  434 bits (1116), Expect = e-119
 Identities = 203/303 (66%), Positives = 256/303 (84%)
 Frame = -3

Query: 930  HVLSHVANELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIA 751
            HVLSH+ANELQVP LSFTA DPTLS LQ+P+F+QT+P+D FQMTAIADIV++YGW EV A
Sbjct: 106  HVLSHLANELQVPFLSFTALDPTLSPLQFPYFIQTAPNDLFQMTAIADIVSYYGWSEVTA 165

Query: 750  VYTDDDHGRNGISALGDKLAERRCRISYKAALPPDPGATQAEITDALIKVALMESRIIVV 571
            V+ DDD  RNGI+ LGDKLAERRC+ISYKAALPP+P AT+++I D L K+  MESR+IV+
Sbjct: 166  VFNDDDQNRNGITVLGDKLAERRCKISYKAALPPEPKATRSDIQDELAKILGMESRVIVL 225

Query: 570  HTYSHSGLMVFDIATHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHT 391
            +T+S +GL+VFD+A  L M++ G+VWI T+WLSTV+DS SPL P    S+QGVL LRPHT
Sbjct: 226  NTFSKTGLLVFDVAKALGMMENGFVWIVTSWLSTVIDSASPL-PTTANSIQGVLALRPHT 284

Query: 390  PPSEKKKSFFSRWSQLSNGTIGLNPYGLYAYDTVWIIANAVKAFFDKGGTISFSNDSNLH 211
            P S++K  F SRW+QLSNG+IGLNPYGLYAYDTVW++A A+K+FFD+G TISF+NDS L 
Sbjct: 285  PDSKRKGDFMSRWNQLSNGSIGLNPYGLYAYDTVWLLARALKSFFDQGNTISFTNDSRLG 344

Query: 210  KAVGGSLNLAAMTVFDGGKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGF 31
               GG LNL A+++FDGG QLL +ILQT+MTGLTGP RFNPDRS++HP+ D+INV+ +G+
Sbjct: 345  GIGGGYLNLGALSIFDGGSQLLKNILQTSMTGLTGPFRFNPDRSILHPSYDIINVLETGY 404

Query: 30   RQI 22
            +Q+
Sbjct: 405  QQV 407


>ref|XP_003545055.1| PREDICTED: glutamate receptor 3.2-like [Glycine max]
          Length = 915

 Score =  412 bits (1058), Expect = e-113
 Identities = 190/303 (62%), Positives = 249/303 (82%)
 Frame = -3

Query: 930  HVLSHVANELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIA 751
            HVLSH+ANEL VPLLS TA DPTL+ LQYP+FLQT+PSD F M A+AD+++++GWREVIA
Sbjct: 109  HVLSHLANELHVPLLSSTALDPTLTPLQYPYFLQTAPSDHFHMNAVADLISYFGWREVIA 168

Query: 750  VYTDDDHGRNGISALGDKLAERRCRISYKAALPPDPGATQAEITDALIKVALMESRIIVV 571
            V++DDD  RNGI+ LGDKLAERRC++SYKAALPPDP AT + +T  L+K+  MESR+IV+
Sbjct: 169  VFSDDDQSRNGITVLGDKLAERRCKLSYKAALPPDPTATPSHVTGQLVKIKSMESRVIVL 228

Query: 570  HTYSHSGLMVFDIATHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHT 391
            +T++ +GL+VF++A  L M+  GYVWIAT WLSTVLDS + L  N   S+QGV+T RPHT
Sbjct: 229  NTFAQTGLLVFEVAQKLGMMSKGYVWIATAWLSTVLDSTTSLPSNTCNSIQGVITFRPHT 288

Query: 390  PPSEKKKSFFSRWSQLSNGTIGLNPYGLYAYDTVWIIANAVKAFFDKGGTISFSNDSNLH 211
            P S KK++F SRW  +SNG+IGLNPYGLYAYD+VW+IA A+K FFD+ GTISFSN++NL 
Sbjct: 289  PHSRKKQAFISRWKHISNGSIGLNPYGLYAYDSVWMIAEALKLFFDRNGTISFSNNTNLS 348

Query: 210  KAVGGSLNLAAMTVFDGGKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGF 31
                 +L+  A++VFDGGK+LLD+IL+ NMTGLTGPI+F  DRS ++P+ D++NVI +G+
Sbjct: 349  GTREETLDFGALSVFDGGKELLDNILRINMTGLTGPIQFGSDRSPLNPSYDILNVIATGY 408

Query: 30   RQI 22
            R++
Sbjct: 409  RRV 411


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