BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007532
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521386.1| structural constituent of ribosome, putative...   144   3e-32
ref|XP_002276959.1| PREDICTED: uncharacterized protein LOC100265...   140   4e-31
emb|CAG23918.1| LIN1 protein [Cicer arietinum]                        138   2e-30
ref|XP_004141160.1| PREDICTED: uncharacterized protein LOC101210...   137   3e-30
ref|XP_002882857.1| structural constituent of ribosome [Arabidop...   137   3e-30

>ref|XP_002521386.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223539464|gb|EEF41054.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 195

 Score =  144 bits (363), Expect = 3e-32
 Identities = 78/133 (58%), Positives = 94/133 (70%)
 Frame = -2

Query: 776 MSSKTLARTGLSLFNRFLNPNSTHNLISQTSEISPNLFPTLSKFPTSLHLQPNNKNDESV 597
           M++KTL RTG SL NR +N      +++ + EI+P LFP++SKF  SLH   N+    S+
Sbjct: 1   MATKTLIRTGASLMNRMIN----RQILAHSLEITPQLFPSISKFQNSLHFPQNDTL--SI 54

Query: 596 KRSDIELFLHPCGFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRKRTHGFLARKAT 417
            R   E FLHP G PSL FFLP+GD SS    MLL PKRT+QPS I+RKR HGF ARKAT
Sbjct: 55  TRLSNEGFLHPSGLPSLRFFLPDGDSSS--EPMLLFPKRTFQPSLIRRKRNHGFFARKAT 112

Query: 416 KGGRRVIARRIAK 378
           KGGR+VIARRIAK
Sbjct: 113 KGGRKVIARRIAK 125


>ref|XP_002276959.1| PREDICTED: uncharacterized protein LOC100265274 [Vitis vinifera]
           gi|297743038|emb|CBI35905.3| unnamed protein product
           [Vitis vinifera]
          Length = 147

 Score =  140 bits (353), Expect = 4e-31
 Identities = 84/150 (56%), Positives = 102/150 (68%), Gaps = 11/150 (7%)
 Frame = -2

Query: 776 MSSKTLARTGLSLF----NR-FLNPNSTHN---LISQTSEISPNLFPTLSKFPTSLHLQP 621
           M+SKTL R G SL     NR  L+ N+T N   L+S +  ++P LFP+L+K   SLHL  
Sbjct: 1   MASKTLIRAGASLIKGLSNRSLLHQNTTPNHRILLSGSVGVTPKLFPSLAKPQPSLHL-- 58

Query: 620 NNKNDESVKRS---DIELFLHPCGFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRK 450
           +   D  + +    D +   +PCG PSL FFLP+GD SS    MLL PKRTYQPS IKRK
Sbjct: 59  HETLDSQILKELAFDSQALFYPCGLPSLRFFLPDGDSSS--EPMLLFPKRTYQPSHIKRK 116

Query: 449 RTHGFLARKATKGGRRVIARRIAKGRAKIT 360
           RTHGF ARKATKGGRRVIARR+AKGR++IT
Sbjct: 117 RTHGFFARKATKGGRRVIARRVAKGRSRIT 146


>emb|CAG23918.1| LIN1 protein [Cicer arietinum]
          Length = 134

 Score =  138 bits (347), Expect = 2e-30
 Identities = 77/139 (55%), Positives = 91/139 (65%)
 Frame = -2

Query: 776 MSSKTLARTGLSLFNRFLNPNSTHNLISQTSEISPNLFPTLSKFPTSLHLQPNNKNDESV 597
           M+SKTL R G++L NR    NS   L S   +  P +FP+LSK    L   P N  + + 
Sbjct: 1   MASKTLLRNGVALLNRLSLSNSKSLLNSNNPQ--PYIFPSLSK----LQNFPQNDAESAK 54

Query: 596 KRSDIELFLHPCGFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRKRTHGFLARKAT 417
                E FL+PCG PSL FFLP GD  S    MLL PKRT+QPSTI+RKR HGF ARKAT
Sbjct: 55  NLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKAT 114

Query: 416 KGGRRVIARRIAKGRAKIT 360
           KGGR+VIARR+AKGR +IT
Sbjct: 115 KGGRKVIARRVAKGRFRIT 133


>ref|XP_004141160.1| PREDICTED: uncharacterized protein LOC101210601 [Cucumis sativus]
          Length = 147

 Score =  137 bits (345), Expect = 3e-30
 Identities = 80/148 (54%), Positives = 99/148 (66%), Gaps = 9/148 (6%)
 Frame = -2

Query: 776 MSSKTLARTGLSLFNRF-LNPNSTHNLISQTS--------EISPNLFPTLSKFPTSLHLQ 624
           M+SK L RTG SL NR  L+    +N I  +         E++P LFP++SK  T+  LQ
Sbjct: 1   MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 60

Query: 623 PNNKNDESVKRSDIELFLHPCGFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRKRT 444
            N+   ES+++   E    P G PSL FFLP+GD SS    MLL PKRT+QPSTI+RKR 
Sbjct: 61  QNDT--ESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRN 118

Query: 443 HGFLARKATKGGRRVIARRIAKGRAKIT 360
           HGF ARKATKGGR+VIARRIAKGR++IT
Sbjct: 119 HGFFARKATKGGRKVIARRIAKGRSRIT 146


>ref|XP_002882857.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297328697|gb|EFH59116.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 147

 Score =  137 bits (345), Expect = 3e-30
 Identities = 79/150 (52%), Positives = 99/150 (66%), Gaps = 11/150 (7%)
 Frame = -2

Query: 776 MSSKTLARTGLSLFNRFLNPNSTH-----------NLISQTSEISPNLFPTLSKFPTSLH 630
           M++KTL R+G SL NRFL+  +T+            +  Q  EI P  FP+LS   +SL 
Sbjct: 1   MAAKTLIRSGASLMNRFLSKPTTNLVQNNLRSSFQQIAPQGQEIPPYFFPSLSNLQSSLI 60

Query: 629 LQPNNKNDESVKRSDIELFLHPCGFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRK 450
            +PN+    S++  +   FL+P G PSL FFLPE D SS    +LL PKRT+QPSTI+RK
Sbjct: 61  SRPNDT--ASLQELNERGFLYPSGLPSLEFFLPEVDPSS--EPLLLFPKRTFQPSTIRRK 116

Query: 449 RTHGFLARKATKGGRRVIARRIAKGRAKIT 360
           R HGF ARKATKGGRRVIARRIAKGR ++T
Sbjct: 117 RNHGFFARKATKGGRRVIARRIAKGRHRVT 146