BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007530
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....   101   1e-19
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...    99   9e-19
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...    98   1e-18
ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arab...    97   2e-18
ref|NP_190188.1| RNA recognition motif-containing protein [Arabi...    96   6e-18

>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310490|gb|EFH40914.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score =  101 bits (252), Expect = 1e-19
 Identities = 50/83 (60%), Positives = 62/83 (74%)
 Frame = -3

Query: 528 FCSRLFVSNMSFYWNESDLINLFTPFGKVKDAKLVMDYRTNRPKGFGFITFESEEQAQEA 349
           F ++LFVS +S Y  +  L  LF PFG++ +A+L+ D +T RPKGFGFITFESE+ AQ A
Sbjct: 5   FTTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNA 64

Query: 348 LKAINCSIVGGRLIFVEFAKTVE 280
           LKA+N  IV GRLIFVE AK VE
Sbjct: 65  LKALNGKIVNGRLIFVEAAKEVE 87


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 48/80 (60%), Positives = 62/80 (77%)
 Frame = -3

Query: 522 SRLFVSNMSFYWNESDLINLFTPFGKVKDAKLVMDYRTNRPKGFGFITFESEEQAQEALK 343
           S+LFV  +S Y     L  LF+PFG VK+A+LV+D RT +PKGFGF+TF+SE QAQ+ALK
Sbjct: 7   SQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKALK 66

Query: 342 AINCSIVGGRLIFVEFAKTV 283
           A+N  IV GRL+FVE AK++
Sbjct: 67  AMNGRIVDGRLLFVEVAKSI 86


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = -3

Query: 534 RGFCSRLFVSNMSFYWNESDLINLFTPFGKVKDAKLVMDYRTNRPKGFGFITFESEEQAQ 355
           R F S +FV+ +S Y    +LI +F+PFG V  A+L+ D +T RPKGFGF+ FESE  A+
Sbjct: 21  RRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAE 80

Query: 354 EALKAINCSIVGGRLIFVEFAKTVEP 277
           +ALKA+N  IV GRLIFVE AKT  P
Sbjct: 81  KALKAMNGRIVRGRLIFVEIAKTTRP 106


>ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
           lyrata] gi|297323288|gb|EFH53709.1| hypothetical protein
           ARALYDRAFT_905782 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/86 (54%), Positives = 65/86 (75%)
 Frame = -3

Query: 522 SRLFVSNMSFYWNESDLINLFTPFGKVKDAKLVMDYRTNRPKGFGFITFESEEQAQEALK 343
           ++LFVS +S Y  +  L  LF+PFG++K+A+L+ D  T RPKGFGFITFESE+ A++ALK
Sbjct: 7   AQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKALK 66

Query: 342 AINCSIVGGRLIFVEFAKTVEPQMSD 265
           +++  IV GRLIFVE AK+ E   +D
Sbjct: 67  SLDGKIVEGRLIFVEVAKSSEEVTTD 92


>ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|7630030|emb|CAB88326.1| RNA binding protein-like
           [Arabidopsis thaliana] gi|46931202|gb|AAT06405.1|
           At3g46020 [Arabidopsis thaliana]
           gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis
           thaliana] gi|332644581|gb|AEE78102.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 102

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = -3

Query: 522 SRLFVSNMSFYWNESDLINLFTPFGKVKDAKLVMDYRTNRPKGFGFITFESEEQAQEALK 343
           ++LFVS +S Y  +  L  LF+PFG++K+A+L+ D  T RPKGFGFITF+SE+ A++ALK
Sbjct: 7   AQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALK 66

Query: 342 AINCSIVGGRLIFVEFAKTVE 280
           +++  IV GRLIFVE AK  E
Sbjct: 67  SLDGKIVDGRLIFVEVAKNAE 87