BLASTX nr result

ID: Coptis21_contig00007511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007511
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536394.1| PREDICTED: uncharacterized protein LOC100793...   151   1e-34
ref|XP_002307528.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_002531980.1| conserved hypothetical protein [Ricinus comm...   145   7e-33
ref|NP_001235784.1| uncharacterized protein LOC100500538 [Glycin...   142   5e-32
ref|XP_002300893.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_003536394.1| PREDICTED: uncharacterized protein LOC100793885 [Glycine max]
          Length = 218

 Score =  151 bits (381), Expect = 1e-34
 Identities = 85/163 (52%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
 Frame = +2

Query: 56  CSTYLPLG----FLTSSLIDPLSSDATILNQPVDVSGIAPNLTSHIPVNSHAVYEYMQXX 223
           CS Y  +G       SSL+D  ++  + LN  VD++     L   +P  SHA  ++M   
Sbjct: 60  CSCYTEVGASAGITISSLVDAATTQIS-LNSDVDLN----TLKLSMPETSHASSDFMTRL 114

Query: 224 XXXXXXXXXXXXXIGILGPLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIP 403
                        IG LGP  S F FLFIVRIVMSWYPKLPVGKFPY++AYAPTEP+LIP
Sbjct: 115 VLADLDPATAKLAIGFLGPFLSVFGFLFIVRIVMSWYPKLPVGKFPYVIAYAPTEPLLIP 174

Query: 404 TRKLIXXXXXXXXXXXXWFGLISFLSEILVGPQGLLKLLSQQV 532
           TRK+I            WFGLISFL+EILVGPQGLL LLSQQV
Sbjct: 175 TRKVIAPLAGVDVTPVVWFGLISFLNEILVGPQGLLVLLSQQV 217


>ref|XP_002307528.1| predicted protein [Populus trichocarpa] gi|222856977|gb|EEE94524.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  150 bits (378), Expect = 2e-34
 Identities = 77/145 (53%), Positives = 90/145 (62%)
 Frame = +2

Query: 98  IDPLSSDATILNQPVDVSGIAPNLTSHIPVNSHAVYEYMQXXXXXXXXXXXXXXXIGILG 277
           +D   S   I  +P  +  +  N+   IP  S A    +Q               +GILG
Sbjct: 63  VDLAMSHGDISGEPFSIPEVVGNINVGIPKTSDATSNLIQRLMLADLDPAAAKSAVGILG 122

Query: 278 PLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIPTRKLIXXXXXXXXXXXXW 457
           P  SAFSFLFI+RIVMSWYPKLPVGKFPY+L YAPTEP+LIPTRKLI            W
Sbjct: 123 PFLSAFSFLFILRIVMSWYPKLPVGKFPYVLVYAPTEPLLIPTRKLIPPLGGVDVTPVVW 182

Query: 458 FGLISFLSEILVGPQGLLKLLSQQV 532
           FGL+SFL+EILVGPQGLL LLSQQ+
Sbjct: 183 FGLLSFLNEILVGPQGLLVLLSQQI 207


>ref|XP_002531980.1| conserved hypothetical protein [Ricinus communis]
           gi|223528377|gb|EEF30416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  145 bits (365), Expect = 7e-33
 Identities = 75/142 (52%), Positives = 92/142 (64%)
 Frame = +2

Query: 107 LSSDATILNQPVDVSGIAPNLTSHIPVNSHAVYEYMQXXXXXXXXXXXXXXXIGILGPLF 286
           L + ATI  +P++      N+  ++   S A  +++Q               IG LGP  
Sbjct: 61  LPTYATISERPLNSFEDVQNINLNVVKTSEATSKFIQSSVVADLDPATAKLAIGFLGPFL 120

Query: 287 SAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIPTRKLIXXXXXXXXXXXXWFGL 466
           SAF FLFI+RIVMSWYPKLPVGKFPY++AYAPTEPIL+PTRK+I            WFGL
Sbjct: 121 SAFGFLFILRIVMSWYPKLPVGKFPYVIAYAPTEPILVPTRKVIPPVGGVDVTPVVWFGL 180

Query: 467 ISFLSEILVGPQGLLKLLSQQV 532
           ISFL+EIL+GPQGLL LLSQQV
Sbjct: 181 ISFLNEILLGPQGLLVLLSQQV 202


>ref|NP_001235784.1| uncharacterized protein LOC100500538 [Glycine max]
           gi|255630585|gb|ACU15652.1| unknown [Glycine max]
          Length = 218

 Score =  142 bits (358), Expect = 5e-32
 Identities = 80/162 (49%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
 Frame = +2

Query: 56  CSTYLPLGFLTSSLIDPLSSDATI---LNQPVDVSGIAPNLTSHIPVNSHAVYEYMQXXX 226
           CS Y  +G      I  L + AT    LN  VD++ +  ++    P ++    + M    
Sbjct: 60  CSCYTEVGASAGITISSLVNAATTHISLNSDVDLNTLKLSIQETSPAST----DLMTRLV 115

Query: 227 XXXXXXXXXXXXIGILGPLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIPT 406
                       IG LGP  S F FLFI+RIVMSWYPKLPVGKFPY++AYAPTEP+LIPT
Sbjct: 116 LADLDPDTAKLAIGFLGPFLSVFGFLFILRIVMSWYPKLPVGKFPYVIAYAPTEPLLIPT 175

Query: 407 RKLIXXXXXXXXXXXXWFGLISFLSEILVGPQGLLKLLSQQV 532
           RK+I            WFGLISFL+EILVGPQGLL LLSQQV
Sbjct: 176 RKVIPPLAGMDVTPVVWFGLISFLNEILVGPQGLLVLLSQQV 217


>ref|XP_002300893.1| predicted protein [Populus trichocarpa] gi|222842619|gb|EEE80166.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score =  139 bits (351), Expect = 3e-31
 Identities = 67/90 (74%), Positives = 74/90 (82%)
 Frame = +2

Query: 263 IGILGPLFSAFSFLFIVRIVMSWYPKLPVGKFPYILAYAPTEPILIPTRKLIXXXXXXXX 442
           IGILGP  SAFSFLF++RIVMSWYPKLPVGKFPY++AYAPTEP+LIPTRKLI        
Sbjct: 14  IGILGPFLSAFSFLFVLRIVMSWYPKLPVGKFPYVIAYAPTEPLLIPTRKLIPPLGGVDV 73

Query: 443 XXXXWFGLISFLSEILVGPQGLLKLLSQQV 532
               WFGL SFL+EILVGPQGLL LLSQQ+
Sbjct: 74  TPVVWFGLSSFLNEILVGPQGLLVLLSQQI 103


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