BLASTX nr result

ID: Coptis21_contig00007504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007504
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325840.1| predicted protein [Populus trichocarpa] gi|2...   153   4e-35
ref|XP_002281809.1| PREDICTED: uncharacterized protein LOC100255...   150   3e-34
ref|XP_002283663.2| PREDICTED: uncharacterized protein LOC100258...   150   3e-34
ref|XP_002525421.1| conserved hypothetical protein [Ricinus comm...   145   1e-32
ref|XP_002299101.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31

>ref|XP_002325840.1| predicted protein [Populus trichocarpa] gi|222862715|gb|EEF00222.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  153 bits (387), Expect = 4e-35
 Identities = 89/184 (48%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
 Frame = +2

Query: 290 EMESEGKRAPTSSRVRGETDFLLQWGNRKRLRCLKVKEEE----ESNGVIRKKITSXXXX 457
           E E   +RA   S    E +F LQWGN+KRLRC++V++ +     S+GV R+KITS    
Sbjct: 2   EKEERNQRASCKSL---EPEFFLQWGNKKRLRCVRVRDPQIISRRSDGVFRRKITSRIDR 58

Query: 458 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKEERYYTTRGSVGVDEN 637
                                                     EKE+RYYTTRGSVG+DEN
Sbjct: 59  FVVSSATTEKDTSLLQSNRITRNSEAAVLRSSVAENRKSSSPEKEDRYYTTRGSVGLDEN 118

Query: 638 GKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFMAMKGCKLPQRPKKRAKFIQKTLLL 817
           GK  MD    N   K +VWPKL+ +LSSKEKEEDFMAMKGCKLPQRPKKRAK IQ++LLL
Sbjct: 119 GKVSMD--GNNGDDKAHVWPKLYTTLSSKEKEEDFMAMKGCKLPQRPKKRAKIIQRSLLL 176

Query: 818 VSPG 829
           VSPG
Sbjct: 177 VSPG 180


>ref|XP_002281809.1| PREDICTED: uncharacterized protein LOC100255634 [Vitis vinifera]
           gi|297739765|emb|CBI29947.3| unnamed protein product
           [Vitis vinifera]
          Length = 214

 Score =  150 bits (379), Expect = 3e-34
 Identities = 86/166 (51%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
 Frame = +2

Query: 341 ETDFLLQWGNRKRLRCLKVKEEE---ESNGVIRKKITSXXXXXXXXXXXXXXXXXXXXXX 511
           ETDF LQWGNRKRLRC++VK+      SNG IR+KITS                      
Sbjct: 15  ETDFFLQWGNRKRLRCVRVKDPNVSVRSNGAIRRKITSRIDRSVVTGSEKESAHLQPSRF 74

Query: 512 XXXXXXXXXXXXXXXXXXXXXXXXEKEERYYTTRGSVGVDENGKNLMDLGVENEKKKVNV 691
                                   EKE+RYYTTRGS G+D+NGK  ++ G   + + + V
Sbjct: 75  TRNTEGATLRSVTNENRKSGSS--EKEDRYYTTRGSAGMDDNGKVSVEGGGGGDDRGL-V 131

Query: 692 WPKLFISLSSKEKEEDFMAMKGCKLPQRPKKRAKFIQKTLLLVSPG 829
           WPKL+ISLSSKEKEEDFMAMKGCKLPQRPKKRAK IQ++LLLVSPG
Sbjct: 132 WPKLYISLSSKEKEEDFMAMKGCKLPQRPKKRAKIIQRSLLLVSPG 177


>ref|XP_002283663.2| PREDICTED: uncharacterized protein LOC100258776 [Vitis vinifera]
           gi|147858690|emb|CAN78878.1| hypothetical protein
           VITISV_024989 [Vitis vinifera]
           gi|297746483|emb|CBI16539.3| unnamed protein product
           [Vitis vinifera]
          Length = 212

 Score =  150 bits (379), Expect = 3e-34
 Identities = 97/185 (52%), Positives = 110/185 (59%), Gaps = 6/185 (3%)
 Frame = +2

Query: 293 MESEGKRAPTSSRVRG-ETDFLLQWGNRKRLRCLKVKE----EEESNGVIRKKITSXXXX 457
           M+ EGK        RG E DFLL+WGNRKRLRC+KVK+     E+S+ +  KKITS    
Sbjct: 1   MDKEGKN---QKGCRGSEPDFLLRWGNRKRLRCVKVKDGRNVAEKSDCLGSKKITSRVDR 57

Query: 458 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKEERYYTTRGSVGV-DE 634
                                                     EKE+RYYTTRGS+G+ D+
Sbjct: 58  RVVTAEKETPSPQTHRLNRISDSPMKNRENRKISATSP----EKEDRYYTTRGSMGMMDD 113

Query: 635 NGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFMAMKGCKLPQRPKKRAKFIQKTLL 814
           NGK LMD G E+   +  VWPKLFISLSSKEKEEDFMAMKGCKLPQRPKKRAK IQKTLL
Sbjct: 114 NGKVLMDHGGED---RGTVWPKLFISLSSKEKEEDFMAMKGCKLPQRPKKRAKLIQKTLL 170

Query: 815 LVSPG 829
           LVSPG
Sbjct: 171 LVSPG 175


>ref|XP_002525421.1| conserved hypothetical protein [Ricinus communis]
           gi|223535234|gb|EEF36911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score =  145 bits (365), Expect = 1e-32
 Identities = 85/171 (49%), Positives = 100/171 (58%), Gaps = 8/171 (4%)
 Frame = +2

Query: 341 ETDFLLQWGNRKRLRCLKVKE----EEESNGVIRKKITSXXXXXXXXXXXXXXXXXXXXX 508
           E DF LQWGN+KRLRC++V++     + S+GV R+KIT+                     
Sbjct: 15  EPDFFLQWGNKKRLRCVRVRDPQIISQRSDGVFRRKITTRIDRRVISSTTDKETSHPQSN 74

Query: 509 XXXXXXXXXXXXXXXXXXXXXXXXX-EKEERYYTTRGSV---GVDENGKNLMDLGVENEK 676
                                     EKE+RYYTTRGSV   GVDENGK   D    ++ 
Sbjct: 75  HRLTRNSEAAAILRSSVTENKKSASPEKEDRYYTTRGSVVGVGVDENGKVSWDANNGDDN 134

Query: 677 KKVNVWPKLFISLSSKEKEEDFMAMKGCKLPQRPKKRAKFIQKTLLLVSPG 829
           K   VWPKL+ISLSSKEKEEDFMAMKGCKLPQRPKKRAK IQ++LLLVSPG
Sbjct: 135 KGHVVWPKLYISLSSKEKEEDFMAMKGCKLPQRPKKRAKIIQRSLLLVSPG 185


>ref|XP_002299101.1| predicted protein [Populus trichocarpa] gi|222846359|gb|EEE83906.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  141 bits (356), Expect = 2e-31
 Identities = 85/186 (45%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
 Frame = +2

Query: 293 MESEGKRAPTSSRVRGETDFLLQWGNRKRLRCLKVKEEEE-------SNGVIRKKITSXX 451
           ME E K     S   G+TDF+LQWG+ KRLRC+KVK+ +        ++ + +KK+TS  
Sbjct: 1   MEKEKK-----SEAAGDTDFVLQWGSTKRLRCVKVKKAQNLGNKSKLNDSLPKKKLTSRG 55

Query: 452 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKEERYYTTRGSVGVD 631
                                                       +KE+RYYTTRGS+G+D
Sbjct: 56  VATEKDFPSRLIKNSDLLSNNRKSSVLSP---------------DKEDRYYTTRGSMGLD 100

Query: 632 ENGKNLMDLGVENEKKKVNVWPKLFISLSSKEKEEDFMAMKGCKLPQRPKKRAKFIQKTL 811
           +N K LMD    N K++  VWP+LFI+LS+KEKEEDFMAMKGCK PQRPKKRAK IQ+TL
Sbjct: 101 DNSKILMD----NVKEEKVVWPRLFIALSNKEKEEDFMAMKGCKPPQRPKKRAKLIQRTL 156

Query: 812 LLVSPG 829
           LLVSPG
Sbjct: 157 LLVSPG 162


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