BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007496
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30093.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   129   3e-28
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   125   3e-27
ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   119   3e-25

>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/120 (54%), Positives = 82/120 (68%)
 Frame = +2

Query: 62  CLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEHIR 241
           CLS+F+D G +ESHRYYLARRT LEMLRDRGY +P  D+D+SLQ FRS Y Q P+ + +R
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180

Query: 242 ISLPLLSDSTKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQARQAL 421
           IS  L SD +KKILVIFCG +VVK+  +R+I  QI                IT+QA +A+
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/120 (54%), Positives = 82/120 (68%)
 Frame = +2

Query: 62  CLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEHIR 241
           CLS+F+D G +ESHRYYLARRT LEMLRDRGY +P  D+D+SLQ FRS Y Q P+ + +R
Sbjct: 20  CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79

Query: 242 ISLPLLSDSTKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQARQAL 421
           IS  L SD +KKILVIFCG +VVK+  +R+I  QI                IT+QA +A+
Sbjct: 80  ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/128 (50%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
 Frame = +2

Query: 41  EKMEQG-GCLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQ 217
           E+ EQ  GCLS F+D GSVESHRYYL+RRTTLEML+DRGY +P  ++DLSL  FR  +GQ
Sbjct: 20  EEAEQAKGCLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQ 79

Query: 218 SPNLEHIRISLPLLSDSTKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKI 397
            P+ + +R+SL   ++S+K+ILVIFCG  VVK+  +RN   QI                I
Sbjct: 80  FPDPDRLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHI 139

Query: 398 TAQARQAL 421
           T+QA +A+
Sbjct: 140 TSQALKAV 147


>ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|222867887|gb|EEF05018.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/122 (51%), Positives = 82/122 (67%)
 Frame = +2

Query: 56  GGCLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEH 235
           G CLS+F+D GS ESHRYYL+RRT LEML+DRGY VP +++D+SLQ FR  YGQ+P++E 
Sbjct: 5   GRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIEL 64

Query: 236 IRISLPLLSDSTKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQARQ 415
           ++ S    SD +K++LVIFCG  VVK+ M+R I  QI                IT QA +
Sbjct: 65  LKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMK 124

Query: 416 AL 421
           AL
Sbjct: 125 AL 126


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/125 (45%), Positives = 84/125 (67%)
 Frame = +2

Query: 47  MEQGGCLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPN 226
           +E G CLS++ID G+ ESHRY+L+RRT +EML+DRGY +   ++D SLQ FR T+GQ P+
Sbjct: 13  VEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPD 72

Query: 227 LEHIRISLPLLSDSTKKILVIFCGTEVVKLAMVRNIFNQIAXXXXXXXXXXXXXXKITAQ 406
           ++ +++S    SD +K++LV+FCGT  VK+  +RNI  QIA              +IT Q
Sbjct: 73  VDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQ 132

Query: 407 ARQAL 421
           A +A+
Sbjct: 133 AMKAV 137