BLASTX nr result
ID: Coptis21_contig00007495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00007495
(2754 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514013.1| transcription factor, putative [Ricinus comm... 167 1e-38
ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 166 3e-38
emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera] 166 3e-38
ref|XP_002302331.1| predicted protein [Populus trichocarpa] gi|2... 138 7e-30
ref|XP_002306548.1| predicted protein [Populus trichocarpa] gi|2... 136 3e-29
>ref|XP_002514013.1| transcription factor, putative [Ricinus communis]
gi|223547099|gb|EEF48596.1| transcription factor,
putative [Ricinus communis]
Length = 424
Score = 167 bits (423), Expect = 1e-38
Identities = 131/407 (32%), Positives = 187/407 (45%), Gaps = 17/407 (4%)
Frame = -3
Query: 2014 IGDCFDWMEKDSRSRLHQQSTLWQSPNLDFTSTLSYLGQGKPFLALNPSVSMANANGSLP 1835
+GDCF WM +D S +Q WQS NL++ G PF
Sbjct: 55 LGDCFGWMGEDWGSCYPRQQFDWQSSNLNYL--------GAPFNV--------------- 91
Query: 1834 GVAVPVLPTLKSQGNEERQKFQPLTNPYGCVVSTNESLSVMESLGLPYYKISQRIDERKW 1655
E + + NP +VS +L S PY ++Q + W
Sbjct: 92 ---------------EHHRTIPSVMNPGSDMVSIKGTLPAYPSFDPPYSFVAQANEPHGW 136
Query: 1654 FYCVPHHCKTGNPAALNTVVQEKLSTPCNSGVNA--TSNMVPGSVQKEFFVLDQSGNRGN 1481
FYC+P P+ LN+ +E+L N T + G QK F V DQSG++
Sbjct: 137 FYCLPRFRHAFAPS-LNSGFKERLPAAANGNNKEVFTPKVESGCSQKRFLVFDQSGDQTT 195
Query: 1480 LILRSLIGSSSQNLNLARATDINACGLRQKELEAKRDLN-HPWPVVYDELDENGKANXXX 1304
LI S IG+ AC L++++ K +LN H + D+L EN A+
Sbjct: 196 LIFSSGIGTPVPGFTSWGRKPTGACNLKREDPGTKENLNIHLRAIAPDQLGENDGADLQS 255
Query: 1303 XXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTGFYNKREEMEGSTDEVTSSFGA 1133
T HSPS +T +N ++ +GST+EV SS G+
Sbjct: 256 EMHEDTDELNALLYSDDDSDYTEDDEVTSTGHSPSTMTA-HNNQDWFKGSTEEVASSGGS 314
Query: 1132 TKRKRLAD----EESLLGDTASSFT-----KCEDDAQSSCFS--VKTEGEPYCLEANKRL 986
TK+++L D + L DTA+S + E+DA+S C E +NK++
Sbjct: 315 TKKRKLFDGGFSDVPALMDTANSVKPVISFEYENDAESRCDDGLYWASSEMGSESSNKKM 374
Query: 985 RRERICDTVNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 845
R+E+I DTVNILQNIIPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 375 RKEKIRDTVNILQNIIPGGKGKDAIVVLDEAIGYLKSLKVKAKALGL 421
Score = 62.4 bits (150), Expect = 6e-07
Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
Frame = -1
Query: 2280 MVCQ----TRFRALKHESGIAGSAAIIVRVIECFQLLQDCQAE 2164
MVCQ T FRALKHE+GIAGSA IIVRVI CFQ LQDCQ +
Sbjct: 1 MVCQAASQTNFRALKHENGIAGSATIIVRVIACFQPLQDCQKQ 43
>ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH145-like
[Vitis vinifera]
Length = 421
Score = 166 bits (420), Expect = 3e-38
Identities = 126/350 (36%), Positives = 178/350 (50%), Gaps = 19/350 (5%)
Frame = -3
Query: 1837 PGVAVPVLPTLKSQGN---EERQKFQPLTNPYGCVVSTNESLSVMESLGLPYYKISQRID 1667
PG P L TL + E++ NP +V T+ SL+ LP+ + SQ +
Sbjct: 71 PGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFSVLPHSRPSQPNE 130
Query: 1666 ERKWFYCVPHHCKTGNPAALNTVVQEKLSTPC--NSGVNATSNMVPGSVQKEFFVLDQSG 1493
WFYC+P + A+ N++++EKL NS V N++ QK F V DQSG
Sbjct: 131 PHGWFYCLPRFRQAFTHAS-NSILKEKLPAGPYGNSRVVNAPNVISECAQKRFLVFDQSG 189
Query: 1492 NRGNLILRSLIGSSSQNLNLARATDINACGLRQKELEAKRDL-NHPWPVVYDELDENGKA 1316
++ L+ S+IG+ Q L A L E KRDL H P++ DE +ENG
Sbjct: 190 DQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGPILTDESNENGGT 249
Query: 1315 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTGFYNKREEMEGSTDEVTS 1145
+ T HSPS +T Y+++E +EG +EV S
Sbjct: 250 DVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMT-VYDRQEWLEGEAEEVAS 308
Query: 1144 SFGATKRKRLADEE---SLLGDTASSFT-----KCEDDAQSSCFSVKTE--GEPYCLEAN 995
S G+ KR++L + + L DTASS + EDDA+SSC GE N
Sbjct: 309 SDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNPEPGEIQSFSGN 368
Query: 994 KRLRRERICDTVNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 845
KR R++RI +TVNILQ++IPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 369 KRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALGL 418
Score = 63.9 bits (154), Expect = 2e-07
Identities = 33/41 (80%), Positives = 34/41 (82%), Gaps = 4/41 (9%)
Frame = -1
Query: 2280 MVCQ----TRFRALKHESGIAGSAAIIVRVIECFQLLQDCQ 2170
MVCQ TRFRALKHE+GIAGSA IIVRVI CFQ LQDCQ
Sbjct: 1 MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQ 41
>emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera]
Length = 402
Score = 166 bits (420), Expect = 3e-38
Identities = 126/350 (36%), Positives = 178/350 (50%), Gaps = 19/350 (5%)
Frame = -3
Query: 1837 PGVAVPVLPTLKSQGN---EERQKFQPLTNPYGCVVSTNESLSVMESLGLPYYKISQRID 1667
PG P L TL + E++ NP +V T+ SL+ LP+ + SQ +
Sbjct: 52 PGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFSVLPHSRPSQPNE 111
Query: 1666 ERKWFYCVPHHCKTGNPAALNTVVQEKLSTPC--NSGVNATSNMVPGSVQKEFFVLDQSG 1493
WFYC+P + A+ N++++EKL NS V N++ QK F V DQSG
Sbjct: 112 PHGWFYCLPRFRQAFTHAS-NSILKEKLPAGPYGNSRVVNAPNVISECAQKRFLVFDQSG 170
Query: 1492 NRGNLILRSLIGSSSQNLNLARATDINACGLRQKELEAKRDL-NHPWPVVYDELDENGKA 1316
++ L+ S+IG+ Q L A L E KRDL H P++ DE +ENG
Sbjct: 171 DQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGPILTDESNENGGT 230
Query: 1315 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTGFYNKREEMEGSTDEVTS 1145
+ T HSPS +T Y+++E +EG +EV S
Sbjct: 231 DVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMT-VYDRQEWLEGEAEEVAS 289
Query: 1144 SFGATKRKRLADEE---SLLGDTASSFT-----KCEDDAQSSCFSVKTE--GEPYCLEAN 995
S G+ KR++L + + L DTASS + EDDA+SSC GE N
Sbjct: 290 SDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNPEPGEIQSFSGN 349
Query: 994 KRLRRERICDTVNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 845
KR R++RI +TVNILQ++IPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 350 KRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALGL 399
Score = 63.9 bits (154), Expect = 2e-07
Identities = 33/41 (80%), Positives = 34/41 (82%), Gaps = 4/41 (9%)
Frame = -1
Query: 2280 MVCQ----TRFRALKHESGIAGSAAIIVRVIECFQLLQDCQ 2170
MVCQ TRFRALKHE+GIAGSA IIVRVI CFQ LQDCQ
Sbjct: 1 MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQ 41
>ref|XP_002302331.1| predicted protein [Populus trichocarpa] gi|222844057|gb|EEE81604.1|
predicted protein [Populus trichocarpa]
Length = 368
Score = 138 bits (348), Expect = 7e-30
Identities = 126/389 (32%), Positives = 183/389 (47%), Gaps = 16/389 (4%)
Frame = -3
Query: 1963 QQSTLWQSPNLDFTSTLSYLGQ-GKPFLALNPSVSMANANGSLPGVAVPVLPTLKSQGNE 1787
QQ WQSP+ ++ GQ P L ++P+V+M + NG LP P L+SQ +
Sbjct: 8 QQQFNWQSPDTNYLGASFSSGQQNNPPLLMDPNVNMISTNG-LP--EYPFAELLRSQVGQ 64
Query: 1786 ERQKFQPLTNPYGCVVSTNESLSVMESLGLPYYKISQRIDERKWFYCVPHHCKTGNPAAL 1607
E + P G GLP + R+ F H L
Sbjct: 65 ENE-------PRGWFY------------GLPRF--------RQAFMPPFHSVLKEKRPLL 97
Query: 1606 NTVVQEKLSTPCNSGVNATSNMVPGSVQKEFFVLDQSGNRGNLILRSLIGSSSQNLNLAR 1427
+TV++EKL T + G QK F V DQSG++ LI S IG+ +Q L
Sbjct: 98 DTVLKEKLPTAPREIKDIVPQSDSGRAQKRFLVFDQSGDQTTLIFSSGIGTPAQCLKSWI 157
Query: 1426 ATDINACGLRQKELEAKRDLN-HPWPVVYDELDENG---KANXXXXXXXXXXXXXXXXXX 1259
A L ++ AK + + H P+ DE E+
Sbjct: 158 PKPTIAFDLNKEVTGAKENQSFHLGPISTDEFVEDDGIEMQTDVHEDIEELNALLYSDDD 217
Query: 1258 XXXXXXXXXXSTAHSPSELTGFYNKREEMEGSTDEVTSSFGATKRKRLADEESLLG---- 1091
ST HSP+ +T ++KR+ +GST++V SS G+ K+++L D + G
Sbjct: 218 SDYTEDEEVTSTGHSPNTMTT-HDKRDWFDGSTEDVASSDGSNKKRKLFDGGYIDGPSLM 276
Query: 1090 DTASSFT-----KCEDDAQSSCFSVKT--EGEPYCLEANKRLRRERICDTVNILQNIIPG 932
DTA S + EDDA+S C + E NKR+R+ERI +TV+ILQN+IPG
Sbjct: 277 DTARSVKPTRDFEYEDDAESRCDNGTNLMSEEMGSESVNKRMRKERIRETVSILQNLIPG 336
Query: 931 GKGKDAVVILDEAVQYLRFLKHKAESLGV 845
GKGKDAV++L+EA+QYL+ LK +A++LG+
Sbjct: 337 GKGKDAVIVLEEAIQYLKSLKFEAKALGL 365
>ref|XP_002306548.1| predicted protein [Populus trichocarpa] gi|222855997|gb|EEE93544.1|
predicted protein [Populus trichocarpa]
Length = 365
Score = 136 bits (342), Expect = 3e-29
Identities = 121/406 (29%), Positives = 182/406 (44%), Gaps = 23/406 (5%)
Frame = -3
Query: 1993 MEKDSRSRLHQQSTLWQSPNLDFTSTLSYLGQGKPF-LALNPSVSMANANGSLPGVAVPV 1817
M +D S QQ WQSPN ++ GQ L ++P+ +M NG + P
Sbjct: 1 MGEDWGSLFPQQRFNWQSPNSNYLDASLAFGQQNTLPLLMDPNTNMVFTNG----IGYPF 56
Query: 1816 LPTLKSQGNEERQKFQPLTNPYGCVVSTNESLSVMESLGLPYYKISQRIDERKWFYCVPH 1637
L SQ ++E + R WF+ +PH
Sbjct: 57 TELLPSQASQENEP-------------------------------------RGWFHGLPH 79
Query: 1636 HCKTGNPAA----------LNTVVQEKLST-PCNSGVNATSNMVPGSVQKEFFVLDQSGN 1490
+ P + L+TV++EKL T P ++ + V G QK V DQSG+
Sbjct: 80 FRQALMPPSNSVHKERRPRLDTVLKEKLPTAPHDNKEDNMPKAVSGCDQKRLLVFDQSGD 139
Query: 1489 RGNLILRSLIGSSSQNLNLARATDINACGLRQKELEAKRDLNHPWPVVYDELDENGKANX 1310
+ LI S +G+ Q L L ++ AK H P+ DE E+ +
Sbjct: 140 QTTLIFSSGVGTPVQCLKSWIPKPTVGFDLNREIPGAKGQNFHLGPIANDEFVEDDGIDM 199
Query: 1309 XXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHSPSELTGFYNKREEMEGSTDEVTSSFGAT 1130
T HSPS +T +++R+ +GS +EV SS G+
Sbjct: 200 HEDTEELNALLYSDDGSVCSEDEVTS--TGHSPSTMTT-HDRRDWFDGSAEEVASSNGSN 256
Query: 1129 KRKRLAD----EESLLGDTASSF--TKC---EDDAQSSCFSVKTE--GEPYCLEANKRLR 983
K+++L D + L DTA+S T+C E+D +S C + E NKR+R
Sbjct: 257 KKRKLFDGGYTDAPSLKDTATSVKPTRCFGHEEDVESRCDNGTNSLSHEMGSESGNKRMR 316
Query: 982 RERICDTVNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 845
+E I +T++ILQN+IPGGKGKDA+V+L+EA+QYL+ LK KA++LG+
Sbjct: 317 KENIRETMSILQNLIPGGKGKDAIVVLEEAIQYLKSLKFKAKALGL 362