BLASTX nr result

ID: Coptis21_contig00007490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007490
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631941.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   213   2e-53
emb|CBI22917.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_002519188.1| amsh, putative [Ricinus communis] gi|2235415...   175   5e-42
ref|XP_003529542.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   159   4e-37
ref|XP_004161388.1| PREDICTED: AMSH-like ubiquitin thioesterase ...   156   2e-36

>ref|XP_003631941.1| PREDICTED: AMSH-like ubiquitin thiolesterase 3-like [Vitis
           vinifera]
          Length = 459

 Score =  213 bits (543), Expect = 2e-53
 Identities = 113/188 (60%), Positives = 143/188 (76%), Gaps = 3/188 (1%)
 Frame = -1

Query: 557 MKPLHRPINIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFSS 378
           MKPL RP N++++TR+V VD+RIPL +YYRIADNL+KQA++YREEKNL+DLYIILLRFSS
Sbjct: 1   MKPLERPFNVNSITRRVDVDDRIPLRYYYRIADNLIKQASVYREEKNLIDLYIILLRFSS 60

Query: 377 LVSETIPRHRDYQVLLPREKKNYRKKLLDVIDELEPLKPVVQRLVEEMNKVHSGTQH--- 207
           L+SETIP HRDYQVLLP+E+  YRKKLL V+DELE LKP  QR V E+NK H+ +Q    
Sbjct: 61  LLSETIPFHRDYQVLLPKERAIYRKKLLAVLDELESLKPEFQRQVNELNKAHTVSQQQQI 120

Query: 206 DFIERSIYNTAAYALEPSYNKKPTPSNVDIKLLNAVGRSSSQTSWKHDNESTQMFSSNSM 27
           D +ER+ Y++   +  P  NKKP PS  D K   AV R + Q SWK+ N+ TQ+ SSN M
Sbjct: 121 DVLERTPYDSEISSQWPPVNKKPFPS-FDNK--QAVSR-APQISWKYKNDHTQVLSSNPM 176

Query: 26  QIENQLRK 3
           Q++ Q +K
Sbjct: 177 QVDKQFQK 184


>emb|CBI22917.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  213 bits (543), Expect = 2e-53
 Identities = 113/188 (60%), Positives = 143/188 (76%), Gaps = 3/188 (1%)
 Frame = -1

Query: 557 MKPLHRPINIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFSS 378
           MKPL RP N++++TR+V VD+RIPL +YYRIADNL+KQA++YREEKNL+DLYIILLRFSS
Sbjct: 1   MKPLERPFNVNSITRRVDVDDRIPLRYYYRIADNLIKQASVYREEKNLIDLYIILLRFSS 60

Query: 377 LVSETIPRHRDYQVLLPREKKNYRKKLLDVIDELEPLKPVVQRLVEEMNKVHSGTQH--- 207
           L+SETIP HRDYQVLLP+E+  YRKKLL V+DELE LKP  QR V E+NK H+ +Q    
Sbjct: 61  LLSETIPFHRDYQVLLPKERAIYRKKLLAVLDELESLKPEFQRQVNELNKAHTVSQQQQI 120

Query: 206 DFIERSIYNTAAYALEPSYNKKPTPSNVDIKLLNAVGRSSSQTSWKHDNESTQMFSSNSM 27
           D +ER+ Y++   +  P  NKKP PS  D K   AV R + Q SWK+ N+ TQ+ SSN M
Sbjct: 121 DVLERTPYDSEISSQWPPVNKKPFPS-FDNK--QAVSR-APQISWKYKNDHTQVLSSNPM 176

Query: 26  QIENQLRK 3
           Q++ Q +K
Sbjct: 177 QVDKQFQK 184


>ref|XP_002519188.1| amsh, putative [Ricinus communis] gi|223541503|gb|EEF43052.1| amsh,
           putative [Ricinus communis]
          Length = 456

 Score =  175 bits (444), Expect = 5e-42
 Identities = 98/181 (54%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
 Frame = -1

Query: 536 INIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFSSLVSETIP 357
           IN++ + RKV VDNRIPL +YYRIADNLL+QANI+REEKN+VDLYIILLRFSSLVSETIP
Sbjct: 3   INVNEIARKVEVDNRIPLRYYYRIADNLLRQANIHREEKNIVDLYIILLRFSSLVSETIP 62

Query: 356 RHRDYQVLLPREKKNYRKKLLDVIDELEPLKPVVQRLVEEMNKVHSGTQ---HDFIERSI 186
            H+DY V LP+E+  Y K LL V++ELE LKPV  R VEE+N   + TQ    D  ER  
Sbjct: 63  FHKDYHVSLPKERVAYIKSLLGVLNELESLKPVFHRRVEEINNAFARTQLCELDGPERLS 122

Query: 185 YNTAAYALEPSYNKKPTPSNVDIKLLNAVGRSSSQTSWKHDNESTQMFSSNSMQIENQLR 6
            ++     E     + + +N ++K    V   + Q+SWK+DN +TQ+ SSNS+ I+ QL 
Sbjct: 123 CDSEPSPSEYPLVNRTSYTNTNVKRPYGV---ALQSSWKYDNNNTQVSSSNSLPIDKQLN 179

Query: 5   K 3
           K
Sbjct: 180 K 180


>ref|XP_003529542.1| PREDICTED: AMSH-like ubiquitin thiolesterase 3-like [Glycine max]
          Length = 513

 Score =  159 bits (402), Expect = 4e-37
 Identities = 91/181 (50%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
 Frame = -1

Query: 536 INIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFSSLVSETIP 357
           I++D++ R+V VDNRIP+ +YYRIADNLLKQA IYREE N+VDLYIILLRF SLVSETIP
Sbjct: 3   IDLDSIARRVEVDNRIPIRYYYRIADNLLKQATIYREENNVVDLYIILLRFLSLVSETIP 62

Query: 356 RHRDYQVLLPREKKNYRKKLLDVIDELEPLKPVVQRLVEEMNKVHSGTQHDFIERSIYNT 177
            HRDYQ  LP E+  Y+K+   V+DELE LKP  +R VE+MN  H   +  F E + +N 
Sbjct: 63  YHRDYQASLPNERAAYKKRSRAVLDELESLKPEFKRRVEKMNDSH--VKAPFPEENGFNK 120

Query: 176 AAYALEPSYNKKPTPS---NVDIKLLNAVGRSSSQTSWKHDNESTQMFSSNSMQIENQLR 6
           A  +   S  + P  S      +K L      SS +SW +DN    M S +S  I+ Q +
Sbjct: 121 ALQSSVNSSLEWPAVSKQVRTSLKYLQPTAGFSSHSSWNYDN----MLSLDSRPIDKQFQ 176

Query: 5   K 3
           K
Sbjct: 177 K 177


>ref|XP_004161388.1| PREDICTED: AMSH-like ubiquitin thioesterase 3-like [Cucumis
           sativus]
          Length = 507

 Score =  156 bits (395), Expect = 2e-36
 Identities = 88/177 (49%), Positives = 119/177 (67%), Gaps = 2/177 (1%)
 Frame = -1

Query: 536 INIDAMTRKVHVDNRIPLHFYYRIADNLLKQANIYREEKNLVDLYIILLRFSSLVSETIP 357
           INID   RKV VDNRIPL  Y+RIADNLLKQANIYREE N+VDL+IILLRFSSLVSETIP
Sbjct: 3   INIDREARKVAVDNRIPLRNYFRIADNLLKQANIYREENNVVDLFIILLRFSSLVSETIP 62

Query: 356 RHRDYQVLLPREKKNYRKKLLDVIDELEPLKPVVQRLVEEMNKVHSGTQHDFIERSIYNT 177
           RHRDYQ   P++K  Y+KKLL+V+DELE LKP   R V E+ KV+   +    +     +
Sbjct: 63  RHRDYQAFFPKDKIYYKKKLLNVVDELESLKPEFDRRVNELEKVYGRPRLPPPDEQ--GS 120

Query: 176 AAYALEPSYNKKPTPSNVDIKLLNAVG--RSSSQTSWKHDNESTQMFSSNSMQIENQ 12
            + +  PS  ++P  +     +L+      S  Q+S ++ ++  Q+  S+S+++EN+
Sbjct: 121 VSNSFRPSPKEQPYVNGNYSLMLDQKQHVHSRPQSSRRYSDDRGQVSQSSSLRLENK 177


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