BLASTX nr result

ID: Coptis21_contig00007488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007488
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266...   117   3e-24
ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263...   109   8e-22
ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [...   106   5e-21
ref|XP_002331665.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-20
ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19

>ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera]
          Length = 156

 Score =  117 bits (293), Expect = 3e-24
 Identities = 65/123 (52%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
 Frame = +2

Query: 80  RTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNF 259
           RT  TLN+   + + +++ PHSPWHSPVPY                    CSYWKLSG  
Sbjct: 3   RTGGTLNATAATPAASVQ-PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYL 61

Query: 260 DSEENQ-ERDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSN 436
           + +++   RD E GD   GD V K P  FEEKI+VIMAGDVKPTYLATPMSSRASSFG  
Sbjct: 62  EGDDDSVARDAEAGDGAGGDAV-KPPMAFEEKILVIMAGDVKPTYLATPMSSRASSFGER 120

Query: 437 SIN 445
           S N
Sbjct: 121 SSN 123


>ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263835 [Vitis vinifera]
          Length = 171

 Score =  109 bits (272), Expect = 8e-22
 Identities = 64/124 (51%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
 Frame = +2

Query: 77  MRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLS-G 253
           MRT AT N+   S +   R   SPWHSPVPY                    CSYW+ S G
Sbjct: 1   MRTGATFNATAASPATVQR---SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRFSNG 57

Query: 254 NFDS-EENQERDLENGDEKSGDDVMKAPPV-FEEKIVVIMAGDVKPTYLATPMSSRASSF 427
           + D+ E   ERDLE+GD+  G D  K  PV +EEKIVVIMAGD KP +LATPMSSRASSF
Sbjct: 58  HLDNGESGGERDLESGDDGKGGDARKVGPVVYEEKIVVIMAGDEKPRFLATPMSSRASSF 117

Query: 428 GSNS 439
           G N+
Sbjct: 118 GDNN 121


>ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis sativus]
          Length = 179

 Score =  106 bits (265), Expect = 5e-21
 Identities = 60/118 (50%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
 Frame = +2

Query: 101 SPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFDSEE--N 274
           +P     Q  +  HSPWHSPVPY                    CSYWKLSG  D  +  N
Sbjct: 16  APVAHHQQLQQQQHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLDGSDAAN 75

Query: 275 QERDLENGDEKSGDDVMK-APPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSNSIN 445
           +E DLE G     DD  K A PVFEEKI+VIMAG++KPTYLATPMSSR+SSFG    N
Sbjct: 76  REPDLEAG----ADDTQKQASPVFEEKILVIMAGEMKPTYLATPMSSRSSSFGDTKSN 129


>ref|XP_002331665.1| predicted protein [Populus trichocarpa] gi|222874084|gb|EEF11215.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  103 bits (258), Expect = 3e-20
 Identities = 55/98 (56%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
 Frame = +2

Query: 137 PHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFDS-EENQERDLE--NGDEK 307
           PHSPWHSPVPY                    CSYWKLSG  +S  E  ERDLE   G+ K
Sbjct: 12  PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLESGNEGGERDLEAGEGENK 71

Query: 308 SGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSSRAS 421
           SGD   K P  FEEKI+VIMAG+VKPT+LATPMSSR++
Sbjct: 72  SGDGSEKKPIAFEEKILVIMAGEVKPTFLATPMSSRST 109


>ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|222866372|gb|EEF03503.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  100 bits (250), Expect = 3e-19
 Identities = 57/126 (45%), Positives = 72/126 (57%)
 Frame = +2

Query: 50  LSLLNSTFKMRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXX 229
           +S L++T      A  +  PP+  Q    P SPWHSPVPY                    
Sbjct: 4   ISHLDTTISTTKAAATSPSPPAVVQ----PRSPWHSPVPYLFGGLAAMLGLIAFALLILA 59

Query: 230 CSYWKLSGNFDSEENQERDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMS 409
           CSYW++SG  DSE N+  DLE+G+EK G    K   VFEEK +VIMAG+ KPT+LATP+ 
Sbjct: 60  CSYWRISGRLDSE-NEGNDLESGNEKEGKPENK---VFEEKFLVIMAGNEKPTFLATPVC 115

Query: 410 SRASSF 427
           S+ASSF
Sbjct: 116 SKASSF 121