BLASTX nr result
ID: Coptis21_contig00007488
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00007488 (794 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266... 117 3e-24 ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263... 109 8e-22 ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [... 106 5e-21 ref|XP_002331665.1| predicted protein [Populus trichocarpa] gi|2... 103 3e-20 ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|2... 100 3e-19 >ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera] Length = 156 Score = 117 bits (293), Expect = 3e-24 Identities = 65/123 (52%), Positives = 76/123 (61%), Gaps = 1/123 (0%) Frame = +2 Query: 80 RTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNF 259 RT TLN+ + + +++ PHSPWHSPVPY CSYWKLSG Sbjct: 3 RTGGTLNATAATPAASVQ-PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYL 61 Query: 260 DSEENQ-ERDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSN 436 + +++ RD E GD GD V K P FEEKI+VIMAGDVKPTYLATPMSSRASSFG Sbjct: 62 EGDDDSVARDAEAGDGAGGDAV-KPPMAFEEKILVIMAGDVKPTYLATPMSSRASSFGER 120 Query: 437 SIN 445 S N Sbjct: 121 SSN 123 >ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263835 [Vitis vinifera] Length = 171 Score = 109 bits (272), Expect = 8e-22 Identities = 64/124 (51%), Positives = 74/124 (59%), Gaps = 3/124 (2%) Frame = +2 Query: 77 MRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLS-G 253 MRT AT N+ S + R SPWHSPVPY CSYW+ S G Sbjct: 1 MRTGATFNATAASPATVQR---SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRFSNG 57 Query: 254 NFDS-EENQERDLENGDEKSGDDVMKAPPV-FEEKIVVIMAGDVKPTYLATPMSSRASSF 427 + D+ E ERDLE+GD+ G D K PV +EEKIVVIMAGD KP +LATPMSSRASSF Sbjct: 58 HLDNGESGGERDLESGDDGKGGDARKVGPVVYEEKIVVIMAGDEKPRFLATPMSSRASSF 117 Query: 428 GSNS 439 G N+ Sbjct: 118 GDNN 121 >ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis sativus] Length = 179 Score = 106 bits (265), Expect = 5e-21 Identities = 60/118 (50%), Positives = 68/118 (57%), Gaps = 3/118 (2%) Frame = +2 Query: 101 SPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFDSEE--N 274 +P Q + HSPWHSPVPY CSYWKLSG D + N Sbjct: 16 APVAHHQQLQQQQHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLDGSDAAN 75 Query: 275 QERDLENGDEKSGDDVMK-APPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSNSIN 445 +E DLE G DD K A PVFEEKI+VIMAG++KPTYLATPMSSR+SSFG N Sbjct: 76 REPDLEAG----ADDTQKQASPVFEEKILVIMAGEMKPTYLATPMSSRSSSFGDTKSN 129 >ref|XP_002331665.1| predicted protein [Populus trichocarpa] gi|222874084|gb|EEF11215.1| predicted protein [Populus trichocarpa] Length = 109 Score = 103 bits (258), Expect = 3e-20 Identities = 55/98 (56%), Positives = 62/98 (63%), Gaps = 3/98 (3%) Frame = +2 Query: 137 PHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFDS-EENQERDLE--NGDEK 307 PHSPWHSPVPY CSYWKLSG +S E ERDLE G+ K Sbjct: 12 PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLESGNEGGERDLEAGEGENK 71 Query: 308 SGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSSRAS 421 SGD K P FEEKI+VIMAG+VKPT+LATPMSSR++ Sbjct: 72 SGDGSEKKPIAFEEKILVIMAGEVKPTFLATPMSSRST 109 >ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|222866372|gb|EEF03503.1| predicted protein [Populus trichocarpa] Length = 178 Score = 100 bits (250), Expect = 3e-19 Identities = 57/126 (45%), Positives = 72/126 (57%) Frame = +2 Query: 50 LSLLNSTFKMRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXX 229 +S L++T A + PP+ Q P SPWHSPVPY Sbjct: 4 ISHLDTTISTTKAAATSPSPPAVVQ----PRSPWHSPVPYLFGGLAAMLGLIAFALLILA 59 Query: 230 CSYWKLSGNFDSEENQERDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMS 409 CSYW++SG DSE N+ DLE+G+EK G K VFEEK +VIMAG+ KPT+LATP+ Sbjct: 60 CSYWRISGRLDSE-NEGNDLESGNEKEGKPENK---VFEEKFLVIMAGNEKPTFLATPVC 115 Query: 410 SRASSF 427 S+ASSF Sbjct: 116 SKASSF 121