BLASTX nr result

ID: Coptis21_contig00007478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007478
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26926.3| unnamed protein product [Vitis vinifera]              245   4e-63
ref|XP_002284094.1| PREDICTED: ABC transporter G family member 7...   245   4e-63
ref|XP_003536632.1| PREDICTED: ABC transporter G family member 7...   239   2e-61
ref|XP_002314815.1| white-brown-complex ABC transporter family [...   238   7e-61
ref|XP_002526603.1| abc transporter, putative [Ricinus communis]...   237   1e-60

>emb|CBI26926.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  245 bits (625), Expect = 4e-63
 Identities = 123/145 (84%), Positives = 136/145 (93%)
 Frame = -3

Query: 436 GKPVPVTIQWKNITCSLSEKSGKTVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA 257
           GK  PVTIQW NITCSLS+KS K+VRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA
Sbjct: 69  GKVFPVTIQWSNITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA 128

Query: 256 GQLGASPKLHLSGVLEVNGQSRLNNAYRFAYVRQEDLFFSQLTVRETLSLAAELQLPGVS 77
           GQL ASP+LHLSG+LEVNG++R   AY+FAYVRQEDLFFSQLTVRETLSLAAELQLP +S
Sbjct: 129 GQLMASPRLHLSGLLEVNGKARSKKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPELS 188

Query: 76  SVEEREEYVNNLLFRLGLVNCADSN 2
           SVE+R+EYVNNLL++LGLV+CADSN
Sbjct: 189 SVEDRDEYVNNLLYKLGLVSCADSN 213


>ref|XP_002284094.1| PREDICTED: ABC transporter G family member 7-like [Vitis vinifera]
          Length = 728

 Score =  245 bits (625), Expect = 4e-63
 Identities = 123/145 (84%), Positives = 136/145 (93%)
 Frame = -3

Query: 436 GKPVPVTIQWKNITCSLSEKSGKTVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA 257
           GK  PVTIQW NITCSLS+KS K+VRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA
Sbjct: 69  GKVFPVTIQWSNITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA 128

Query: 256 GQLGASPKLHLSGVLEVNGQSRLNNAYRFAYVRQEDLFFSQLTVRETLSLAAELQLPGVS 77
           GQL ASP+LHLSG+LEVNG++R   AY+FAYVRQEDLFFSQLTVRETLSLAAELQLP +S
Sbjct: 129 GQLMASPRLHLSGLLEVNGKARSKKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPELS 188

Query: 76  SVEEREEYVNNLLFRLGLVNCADSN 2
           SVE+R+EYVNNLL++LGLV+CADSN
Sbjct: 189 SVEDRDEYVNNLLYKLGLVSCADSN 213


>ref|XP_003536632.1| PREDICTED: ABC transporter G family member 7-like [Glycine max]
          Length = 725

 Score =  239 bits (610), Expect = 2e-61
 Identities = 119/145 (82%), Positives = 131/145 (90%)
 Frame = -3

Query: 436 GKPVPVTIQWKNITCSLSEKSGKTVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA 257
           GK  PVTIQW+NI CSLS+KS K+ RFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA
Sbjct: 67  GKVTPVTIQWRNINCSLSDKSSKSARFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA 126

Query: 256 GQLGASPKLHLSGVLEVNGQSRLNNAYRFAYVRQEDLFFSQLTVRETLSLAAELQLPGVS 77
           GQL ASP+LHLSGVLE NG+    NAY+FAYVRQEDLFFSQLTVRETLSLA ELQLP +S
Sbjct: 127 GQLTASPRLHLSGVLEFNGKPGSKNAYKFAYVRQEDLFFSQLTVRETLSLATELQLPNIS 186

Query: 76  SVEEREEYVNNLLFRLGLVNCADSN 2
           S EER+E+VNNLLF+LGLV+CAD+N
Sbjct: 187 SAEERDEFVNNLLFKLGLVSCADTN 211


>ref|XP_002314815.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222863855|gb|EEF00986.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 660

 Score =  238 bits (606), Expect = 7e-61
 Identities = 119/145 (82%), Positives = 132/145 (91%)
 Frame = -3

Query: 436 GKPVPVTIQWKNITCSLSEKSGKTVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA 257
           GK  PVTI+W NITCSLS+KS K+VRFLL NVSGEAKPGRLLAIMGPSGSGKTTLLNVLA
Sbjct: 48  GKVFPVTIRWSNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLA 107

Query: 256 GQLGASPKLHLSGVLEVNGQSRLNNAYRFAYVRQEDLFFSQLTVRETLSLAAELQLPGVS 77
           GQL ASP+LHLSG+LEVNG+   N AY+ AYVRQEDLFFSQLTVRETLSLAAELQLP ++
Sbjct: 108 GQLMASPRLHLSGLLEVNGRPSSNRAYKLAYVRQEDLFFSQLTVRETLSLAAELQLPEIA 167

Query: 76  SVEEREEYVNNLLFRLGLVNCADSN 2
           SVEER+EYVNNLLF+LGL +CAD+N
Sbjct: 168 SVEERDEYVNNLLFKLGLASCADTN 192


>ref|XP_002526603.1| abc transporter, putative [Ricinus communis]
           gi|223534043|gb|EEF35762.1| abc transporter, putative
           [Ricinus communis]
          Length = 722

 Score =  237 bits (604), Expect = 1e-60
 Identities = 120/144 (83%), Positives = 133/144 (92%)
 Frame = -3

Query: 433 KPVPVTIQWKNITCSLSEKSGKTVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAG 254
           K VPVTI+W NITCSLS+KS K VRFLLKNV+GEAKPGRL+AIMGPSGSGKTTLLNVLAG
Sbjct: 67  KVVPVTIRWSNITCSLSDKSNKHVRFLLKNVNGEAKPGRLVAIMGPSGSGKTTLLNVLAG 126

Query: 253 QLGASPKLHLSGVLEVNGQSRLNNAYRFAYVRQEDLFFSQLTVRETLSLAAELQLPGVSS 74
           QL AS +LHLSG+LEVNG+   N AY+FAYVRQEDLFFSQLTVRETLSLAA+LQLP +SS
Sbjct: 127 QLMASTRLHLSGLLEVNGRPCSNQAYKFAYVRQEDLFFSQLTVRETLSLAAQLQLPEISS 186

Query: 73  VEEREEYVNNLLFRLGLVNCADSN 2
           VEER+EYVNNLLF+LGLV+CADSN
Sbjct: 187 VEERDEYVNNLLFKLGLVSCADSN 210


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