BLASTX nr result

ID: Coptis21_contig00007457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007457
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262877.2| PREDICTED: uncharacterized protein LOC100240...   198   3e-48
emb|CBI17891.3| unnamed protein product [Vitis vinifera]              187   5e-45
ref|XP_002309003.1| predicted protein [Populus trichocarpa] gi|2...   187   9e-45
ref|XP_002325253.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-43
ref|NP_001067264.1| Os12g0613500 [Oryza sativa Japonica Group] g...   172   2e-40

>ref|XP_002262877.2| PREDICTED: uncharacterized protein LOC100240988 [Vitis vinifera]
          Length = 425

 Score =  198 bits (504), Expect = 3e-48
 Identities = 118/235 (50%), Positives = 152/235 (64%), Gaps = 2/235 (0%)
 Frame = -3

Query: 965 RKDESEKKDVLTLEDNVVSIDKKGSKKRKRMACEVDGSVLNVKTLSKEEKQARXXXXXXX 786
           ++ +S+  +  T+E++ +  D K SKKRKR+ACE   S    K + ++ K+         
Sbjct: 223 KRTDSKSSNSQTVEEDALDEDDKVSKKRKRLACEESNSQPADKVVVEKSKRQ-------- 274

Query: 785 XXXXXXXDSDGRAGKKFKTENGQVDPKKSEEISLDK--KLDVSTEFKKTPKGSDGQAKAD 612
                            KTE+     K+S+ I L K  K  + ++  +  KG   + + D
Sbjct: 275 -----------------KTESS----KESDGIKLLKEVKESLGSDLDEGDKGKVAK-QLD 312

Query: 611 LHASGDLEGSGKEGSAPQKSANKQQNGSAEPKTRIPFQRVKIDEVEFADNRLQDNSYWAK 432
           + A+G L+ +G++ +A +K    QQN S EPKT   FQRVKIDEVEFAD RLQDNSYWAK
Sbjct: 313 VQANGILDKNGEKSTA-RKQVKNQQN-STEPKTVNAFQRVKIDEVEFADQRLQDNSYWAK 370

Query: 431 GGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDEE 267
           GGADSGYGAKAQE+LGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSD++
Sbjct: 371 GGADSGYGAKAQEILGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDDD 425


>emb|CBI17891.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  187 bits (476), Expect = 5e-45
 Identities = 112/232 (48%), Positives = 140/232 (60%), Gaps = 3/232 (1%)
 Frame = -3

Query: 953 SEKKDVLTLEDNVVSIDKKGSKKRKRMACEVDGSVLNVKTLSKEEKQARXXXXXXXXXXX 774
           +E ++    E N+ S DKK  K  K  +   D    N +T+ ++                
Sbjct: 260 AEGREATDSEANIKSKDKKKKKLEKEKSKRTDSKSSNSQTVEEDALD------------- 306

Query: 773 XXXDSDGRAGKKFKT---ENGQVDPKKSEEISLDKKLDVSTEFKKTPKGSDGQAKADLHA 603
                D +  KK K    E     P  ++++ ++K     TE  K         + D+ A
Sbjct: 307 ----EDDKVSKKRKRLACEESNSQP--ADKVVVEKSKRQKTEIAK---------QLDVQA 351

Query: 602 SGDLEGSGKEGSAPQKSANKQQNGSAEPKTRIPFQRVKIDEVEFADNRLQDNSYWAKGGA 423
           +G L+ +G++ +A +K    QQN S EPKT   FQRVKIDEVEFAD RLQDNSYWAKGGA
Sbjct: 352 NGILDKNGEKSTA-RKQVKNQQN-STEPKTVNAFQRVKIDEVEFADQRLQDNSYWAKGGA 409

Query: 422 DSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDEE 267
           DSGYGAKAQE+LGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSD++
Sbjct: 410 DSGYGAKAQEILGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDDD 461


>ref|XP_002309003.1| predicted protein [Populus trichocarpa] gi|222854979|gb|EEE92526.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  187 bits (474), Expect = 9e-45
 Identities = 113/256 (44%), Positives = 146/256 (57%), Gaps = 26/256 (10%)
 Frame = -3

Query: 956 ESEKKDVLTLEDNVVSIDK-----KGSKKRKRMACEVDGSVLNVKTLSKEEKQARXXXXX 792
           E + KDV + E N  ++ K     K  K +K    + D    + K +  EE++ +     
Sbjct: 21  EEKSKDVSSSEGNKATVSKTENKPKDKKNKKNKLSDADADSNDNKNVKYEERKNKKDIVV 80

Query: 791 XXXXXXXXXDSDGRAGKKFKTENGQVDPKKSEEISLDKKLDVSTEFKKTPKGSDGQAKAD 612
                    D     GK  K ++ + D K SE+   DK+   S + K+ P   D    AD
Sbjct: 81  SENMSVETLDE----GKSNKVDSEKDDSKNSEKDVNDKENKSSKKRKRLPSEDDATQPAD 136

Query: 611 LHA---------------------SGDLEGSGKEGSAPQKSANKQQNGSAEPKTRIPFQR 495
             A                     +G+LE +G++ S  QKS  K++NGS EPKT   FQR
Sbjct: 137 EKAVEDSKRRKMESSEEPKENGSANGNLEKNGEKSSL-QKSMKKEKNGSVEPKTVKHFQR 195

Query: 494 VKIDEVEFADNRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQ 315
           VK+DEV F+D RL+DNSYWAK GA+ GYGAKAQ+VLGQVRGRDFRHEKTKKKRG+YRGGQ
Sbjct: 196 VKVDEVVFSDERLKDNSYWAKDGAEEGYGAKAQDVLGQVRGRDFRHEKTKKKRGTYRGGQ 255

Query: 314 IDLQTHSIKFNYSDEE 267
           IDLQ+HS KFNYSDE+
Sbjct: 256 IDLQSHSFKFNYSDED 271


>ref|XP_002325253.1| predicted protein [Populus trichocarpa] gi|222866687|gb|EEF03818.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  181 bits (459), Expect = 5e-43
 Identities = 95/165 (57%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
 Frame = -3

Query: 758 DGRAGKKFKTENGQVD-PKKSEEISLDKKLDVSTEFKKTPKGSDGQAKADLHASGDLEGS 582
           + ++ KK K  + + D P+ + E +++       E K+    S  + K ++ A+G+LE +
Sbjct: 25  ENKSSKKRKRLSSEDDAPQPANETAIE-------ESKRRKTESSEELKENVQANGNLEEN 77

Query: 581 GKEGSAPQKSANKQQNGSAEPKTRIPFQRVKIDEVEFADNRLQDNSYWAKGGADSGYGAK 402
           G + SAPQKS  K++NGS EPKT   FQRVK+DEV F+D RL+DNSYWAK GA+ GYGAK
Sbjct: 78  GAK-SAPQKSMMKEKNGSVEPKTVKHFQRVKVDEVVFSDERLKDNSYWAKDGAEDGYGAK 136

Query: 401 AQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQTHSIKFNYSDEE 267
           AQEVLGQVRGR FRHEKTKKKRG+YRGGQIDLQ+HS KFNYSDE+
Sbjct: 137 AQEVLGQVRGRGFRHEKTKKKRGTYRGGQIDLQSHSFKFNYSDED 181


>ref|NP_001067264.1| Os12g0613500 [Oryza sativa Japonica Group]
           gi|108862957|gb|ABA99396.2| SRP40, C-terminal domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113649771|dbj|BAF30283.1| Os12g0613500 [Oryza
           sativa Japonica Group] gi|215715236|dbj|BAG94987.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 448

 Score =  172 bits (436), Expect = 2e-40
 Identities = 98/190 (51%), Positives = 126/190 (66%), Gaps = 25/190 (13%)
 Frame = -3

Query: 761 SDGRAGKKFKTENGQVDPKKSEEI----SLDKKLDVSTEFKKTPKGSDGQAKADLHASG- 597
           ++ ++ KK K     V+  +++E+    S  K  D +    +T KG +G   +D    G 
Sbjct: 259 NEKKSKKKLKKSKENVEVVENKEVAGKDSAPKSNDENNSGMETEKGENGMPPSDNAVVGK 318

Query: 596 -----DLEGSG----KEGSAPQKSAN-----------KQQNGSAEPKTRIPFQRVKIDEV 477
                ++EGS     ++ +A QK +N           K+Q  S+EPKT   FQRVK+++V
Sbjct: 319 KRKLEEVEGSNLPAKEDNTASQKLSNGSSEDDGAKPNKRQKKSSEPKTVNAFQRVKLEDV 378

Query: 476 EFADNRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLQTH 297
           +FAD+RLQDNSYWAKGGADSGYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGGQIDLQTH
Sbjct: 379 KFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGGQIDLQTH 438

Query: 296 SIKFNYSDEE 267
           SIKFN SD+E
Sbjct: 439 SIKFNDSDDE 448


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