BLASTX nr result

ID: Coptis21_contig00007444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007444
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526255.1| PREDICTED: uncharacterized protein LOC100792...    64   5e-08
ref|XP_003633014.1| PREDICTED: uncharacterized protein LOC100854...    63   6e-08
emb|CAN75732.1| hypothetical protein VITISV_006336 [Vitis vinifera]    63   6e-08
gb|AFK43949.1| unknown [Lotus japonicus]                               63   8e-08
ref|XP_003522471.1| PREDICTED: uncharacterized protein LOC100527...    62   1e-07

>ref|XP_003526255.1| PREDICTED: uncharacterized protein LOC100792733 [Glycine max]
          Length = 435

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = +3

Query: 24  VASTGSLSLPTTADSVTRDSRQSKRSKWDKVDGDRKNPLHIGGQD 158
           V ++G   +P TADS+ RD RQ+K+SKWDKVDGD+KNPL   GQD
Sbjct: 345 VTASGLPLVPPTADSINRDGRQNKKSKWDKVDGDKKNPLPSAGQD 389


>ref|XP_003633014.1| PREDICTED: uncharacterized protein LOC100854923 [Vitis vinifera]
           gi|297740519|emb|CBI30701.3| unnamed protein product
           [Vitis vinifera]
          Length = 402

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 5/50 (10%)
 Frame = +3

Query: 24  VASTGSLSLP-----TTADSVTRDSRQSKRSKWDKVDGDRKNPLHIGGQD 158
           +A+   +++P     T AD+VTRD RQ+K+SKWDKVDGDR+NPL  GGQD
Sbjct: 307 IAAAPKINIPLPGVSTAADAVTRDGRQNKKSKWDKVDGDRRNPLPSGGQD 356


>emb|CAN75732.1| hypothetical protein VITISV_006336 [Vitis vinifera]
          Length = 586

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 5/50 (10%)
 Frame = +3

Query: 24  VASTGSLSLP-----TTADSVTRDSRQSKRSKWDKVDGDRKNPLHIGGQD 158
           +A+   +++P     T AD+VTRD RQ+K+SKWDKVDGDR+NPL  GGQD
Sbjct: 351 IAAAPKINIPLPGVSTAADAVTRDGRQNKKSKWDKVDGDRRNPLPSGGQD 400


>gb|AFK43949.1| unknown [Lotus japonicus]
          Length = 136

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +3

Query: 30  STGSLSLPTTADSVTRDSRQSKRSKWDKVDGDRKNPLHIGGQD 158
           ++G   +P  ADS+ RD RQ+K+SKWDKVDGDRKNPL  GGQD
Sbjct: 48  ASGLHLVPPGADSINRDGRQNKKSKWDKVDGDRKNPLPSGGQD 90


>ref|XP_003522471.1| PREDICTED: uncharacterized protein LOC100527074 [Glycine max]
          Length = 434

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +3

Query: 15  VPPVASTGSLSLPTTADSVTRDSRQSKRSKWDKVDGDRKNPLHIGGQD 158
           V  V + G   +P T+DS+ RD RQ+K+SKWD+VDGDRKNPL   GQD
Sbjct: 341 VSAVTAGGLPLVPATSDSINRDGRQNKKSKWDRVDGDRKNPLPSAGQD 388


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