BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007440
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46
ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group] g...   185   3e-45
gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japo...   185   3e-45
gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indi...   185   3e-45
ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [S...   182   2e-44

>ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Brachypodium distachyon]
          Length = 555

 Score =  187 bits (476), Expect = 6e-46
 Identities = 88/145 (60%), Positives = 113/145 (77%), Gaps = 2/145 (1%)
 Frame = -3

Query: 429 WNSMISGFAKSGFVSLARKMFDEMPERNIVSWNSMVSAYAQSGEVEEARNLFEEMPERDV 250
           WNSMI+GFA+ G + LARKMFDEMP RN+VSWN+MV  YA +GE+ +AR LF+ MPE+DV
Sbjct: 213 WNSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMNDARELFDRMPEKDV 272

Query: 249 FSWSCMISGYAQSNHGEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHLTALDHGKWVHT 70
            SW+CMISGYAQ+    + ++LF+ M  ES V PNEVT+VSVLS C HLTAL+ G+W H 
Sbjct: 273 VSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEEGRWAHA 332

Query: 69  YIERNGMRLSD--NLGAALVDMYAK 1
           +I+++ M L    NLGAAL+DMY+K
Sbjct: 333 FIDKHKMVLDSEFNLGAALIDMYSK 357



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -3

Query: 426 NSMISGFAKSGFVSLARKMFDEMPE-RNIVSWNSMVSAYAQSGEVEEARNLFEEMPERDV 250
           N++++ +A        R++FD      ++V+WN+M+  Y + GE+ EAR +FE+MP+R+ 
Sbjct: 118 NTLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTMLGGYVKCGEIGEARRVFEQMPQRNG 177

Query: 249 FSWSCMISGYAQSNHGEDAMKLFQNM 172
            SWS M+  YA +   + A ++F  M
Sbjct: 178 VSWSAMVGAYAGAGELDVAREMFDEM 203


>ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
           gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|42407750|dbj|BAD08896.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113624127|dbj|BAF24072.1|
           Os08g0500600 [Oryza sativa Japonica Group]
          Length = 429

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/145 (58%), Positives = 117/145 (80%), Gaps = 2/145 (1%)
 Frame = -3

Query: 429 WNSMISGFAKSGFVSLARKMFDEMPERNIVSWNSMVSAYAQSGEVEEARNLFEEMPERDV 250
           WNSM++GFA+ G + LARKMFDEMP RN+VSWN+M+  Y+ + +++ AR LF+ MPE+DV
Sbjct: 91  WNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDV 150

Query: 249 FSWSCMISGYAQSNHGEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHLTALDHGKWVHT 70
            SW+CMISGYAQ+   +D ++LF+ M  ES V+PNEVT+VSVLS C +LTAL+ G+WVH 
Sbjct: 151 VSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHA 210

Query: 69  YIERNGMRLSD--NLGAALVDMYAK 1
           +I+++ M L++  NLGAAL+DMYAK
Sbjct: 211 FIDKHKMVLNNEYNLGAALIDMYAK 235



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/95 (44%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
 Frame = -3

Query: 429 WNSMISGFAKSGFVSLARKMFDEMPERNIVSWNSMVSAYAQSGEVEEARNLFEEMPE--R 256
           WN++I G+ K G +  A+++FDEMP RN VSW++MV  YA +GE++ AR +F+ MP   R
Sbjct: 27  WNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGR 86

Query: 255 DVFSWSCMISGYAQSNHGEDAMKLFQNMVDESRVR 151
           +V +W+ M++G+A+  HG   + L + M DE  VR
Sbjct: 87  NVVTWNSMVTGFAR--HG--LLPLARKMFDEMPVR 117



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = -3

Query: 348 NIVSWNSMVSAYAQSGEVEEARNLFEEMPERDVFSWSCMISGYAQSNHGEDAMKLFQNM 172
           ++VSWN+++  Y + GE+E A+ +F+EMP R+  SWS M+ GYA +   + A ++F  M
Sbjct: 23  DVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM 81


>gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
          Length = 567

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/145 (58%), Positives = 117/145 (80%), Gaps = 2/145 (1%)
 Frame = -3

Query: 429 WNSMISGFAKSGFVSLARKMFDEMPERNIVSWNSMVSAYAQSGEVEEARNLFEEMPERDV 250
           WNSM++GFA+ G + LARKMFDEMP RN+VSWN+M+  Y+ + +++ AR LF+ MPE+DV
Sbjct: 229 WNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDV 288

Query: 249 FSWSCMISGYAQSNHGEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHLTALDHGKWVHT 70
            SW+CMISGYAQ+   +D ++LF+ M  ES V+PNEVT+VSVLS C +LTAL+ G+WVH 
Sbjct: 289 VSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHA 348

Query: 69  YIERNGMRLSD--NLGAALVDMYAK 1
           +I+++ M L++  NLGAAL+DMYAK
Sbjct: 349 FIDKHKMVLNNEYNLGAALIDMYAK 373



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/95 (44%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
 Frame = -3

Query: 429 WNSMISGFAKSGFVSLARKMFDEMPERNIVSWNSMVSAYAQSGEVEEARNLFEEMPE--R 256
           WN++I G+ K G +  A+++FDEMP RN VSW++MV  YA +GE++ AR +F+ MP   R
Sbjct: 165 WNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGR 224

Query: 255 DVFSWSCMISGYAQSNHGEDAMKLFQNMVDESRVR 151
           +V +W+ M++G+A+  HG   + L + M DE  VR
Sbjct: 225 NVVTWNSMVTGFAR--HG--LLPLARKMFDEMPVR 255



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = -3

Query: 348 NIVSWNSMVSAYAQSGEVEEARNLFEEMPERDVFSWSCMISGYAQSNHGEDAMKLFQNM 172
           ++VSWN+++  Y + GE+E A+ +F+EMP R+  SWS M+ GYA +   + A ++F  M
Sbjct: 161 DVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM 219


>gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
          Length = 567

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/145 (58%), Positives = 117/145 (80%), Gaps = 2/145 (1%)
 Frame = -3

Query: 429 WNSMISGFAKSGFVSLARKMFDEMPERNIVSWNSMVSAYAQSGEVEEARNLFEEMPERDV 250
           WNSM++GFA+ G + LARKMFDEMP RN+VSWN+M+  Y+ + +++ AR LF+ MPE+DV
Sbjct: 229 WNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDV 288

Query: 249 FSWSCMISGYAQSNHGEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHLTALDHGKWVHT 70
            SW+CMISGYAQ+   +D ++LF+ M  ES V+PNEVT+VSVLS C +LTAL+ G+WVH 
Sbjct: 289 VSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHA 348

Query: 69  YIERNGMRLSD--NLGAALVDMYAK 1
           +I+++ M L++  NLGAAL+DMYAK
Sbjct: 349 FIDKHKMVLNNEYNLGAALIDMYAK 373



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/95 (44%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
 Frame = -3

Query: 429 WNSMISGFAKSGFVSLARKMFDEMPERNIVSWNSMVSAYAQSGEVEEARNLFEEMPE--R 256
           WN++I G+ K G +  A+++FDEMP RN VSW++MV  YA +GE++ AR +F+ MP   R
Sbjct: 165 WNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGR 224

Query: 255 DVFSWSCMISGYAQSNHGEDAMKLFQNMVDESRVR 151
           +V +W+ M++G+A+  HG   + L + M DE  VR
Sbjct: 225 NVVTWNSMVTGFAR--HG--LLPLARKMFDEMPVR 255



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = -3

Query: 348 NIVSWNSMVSAYAQSGEVEEARNLFEEMPERDVFSWSCMISGYAQSNHGEDAMKLFQNM 172
           ++VSWN+++  Y + GE+E A+ +F+EMP R+  SWS M+ GYA +   + A ++F  M
Sbjct: 161 DVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM 219


>ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
           gi|241942283|gb|EES15428.1| hypothetical protein
           SORBIDRAFT_07g028280 [Sorghum bicolor]
          Length = 498

 Score =  182 bits (463), Expect = 2e-44
 Identities = 84/145 (57%), Positives = 110/145 (75%), Gaps = 2/145 (1%)
 Frame = -3

Query: 429 WNSMISGFAKSGFVSLARKMFDEMPERNIVSWNSMVSAYAQSGEVEEARNLFEEMPERDV 250
           WN M++GF + G + LARKMFDEMP RNIVSWN+M+  YA +GE++ AR LF+ MPE+DV
Sbjct: 227 WNLMVTGFGRHGLLPLARKMFDEMPIRNIVSWNAMLRGYAMNGEMDVARELFDVMPEKDV 286

Query: 249 FSWSCMISGYAQSNHGEDAMKLFQNMVDESRVRPNEVTLVSVLSVCGHLTALDHGKWVHT 70
            SW+CMISGYAQ+      ++LF+ M     +RPNEVT+VSVLS C HLTAL+ G+W H 
Sbjct: 287 VSWTCMISGYAQAGRYAQTLELFRTMQSHGDIRPNEVTMVSVLSACAHLTALEEGRWAHV 346

Query: 69  YIERNGMRLSD--NLGAALVDMYAK 1
           +I+++ M L +  NLGAAL+DMYAK
Sbjct: 347 FIDKHKMVLDNEFNLGAALIDMYAK 371



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -3

Query: 426 NSMISGFAKSGFVSLARKMFDEMPE-RNIVSWNSMVSAYAQSGEVEEARNLFEEMPERDV 250
           NS+++ +A     +  R +F+   E  ++VSWN++V  YA+ GE+  AR +F+EMP R+ 
Sbjct: 132 NSLLAMYAAFRDTASMRAVFESCAEVADVVSWNTVVFGYAKCGEIGNARRVFDEMPHRNG 191

Query: 249 FSWSCMISGYAQSNHGEDAMKLFQNM 172
            SWS M+  YA +   + A ++F  M
Sbjct: 192 VSWSVMVGAYAAAGELDVAREMFDRM 217