BLASTX nr result

ID: Coptis21_contig00007436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007436
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525441.1| short-chain type dehydrogenase, putative [Ri...   375   e-102
ref|XP_002319165.1| predicted protein [Populus trichocarpa] gi|2...   354   2e-95
ref|XP_002282164.1| PREDICTED: short-chain type dehydrogenase/re...   353   3e-95
ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|2...   345   8e-93
ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ri...   345   1e-92

>ref|XP_002525441.1| short-chain type dehydrogenase, putative [Ricinus communis]
           gi|223535254|gb|EEF36931.1| short-chain type
           dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  375 bits (962), Expect = e-102
 Identities = 179/241 (74%), Positives = 215/241 (89%)
 Frame = +1

Query: 1   RGIGRAIALHLASIGAKLVINYASSPTEADRVASEINSSSSNPDPQAIAVQANVSNPDQV 180
           RGIGRAI++HL S+GAK+V+NYASS T+AD +ASE+N+S+S   P A+A++A+VS+PDQV
Sbjct: 28  RGIGRAISIHLHSLGAKVVLNYASSSTQADHLASELNASASASHPHAVAIKADVSDPDQV 87

Query: 181 KSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDRTFSVNTRGAFLCCREAAN 360
           K LFD+ E+ FG++ +ILVNCAGV+D KYP+LANTTVEDWD TF+VN +GAFLCCREAAN
Sbjct: 88  KQLFDRTEQEFGSKIHILVNCAGVMDPKYPSLANTTVEDWDMTFNVNAKGAFLCCREAAN 147

Query: 361 RLTRGSGGRIITITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANCIAPGP 540
           RL  G GGRII I++S+VGS +PGY+AYAASKAAVETM KILAKELKGTGITANC+APGP
Sbjct: 148 RLASGGGGRIIMISTSVVGSNFPGYAAYAASKAAVETMTKILAKELKGTGITANCVAPGP 207

Query: 541 VATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASDAGEWINGQIIRVNGGSV 720
           VATELF+AGKTEE IKR+AD CPLGR+GE  DI+ +VGFLASDAGEWINGQ+IRVNGG V
Sbjct: 208 VATELFFAGKTEETIKRIADSCPLGRLGEPKDISEIVGFLASDAGEWINGQVIRVNGGFV 267

Query: 721 I 723
           I
Sbjct: 268 I 268


>ref|XP_002319165.1| predicted protein [Populus trichocarpa] gi|222857541|gb|EEE95088.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  354 bits (908), Expect = 2e-95
 Identities = 168/240 (70%), Positives = 208/240 (86%)
 Frame = +1

Query: 4   GIGRAIALHLASIGAKLVINYASSPTEADRVASEINSSSSNPDPQAIAVQANVSNPDQVK 183
           GIGRAI++HL S+GA++VINYAS+  +AD +ASE+N+S+ +  PQAIA++A+VS+PDQVK
Sbjct: 29  GIGRAISIHLHSLGARVVINYASNSNQADLLASELNASAPSSHPQAIAIKADVSDPDQVK 88

Query: 184 SLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDRTFSVNTRGAFLCCREAANR 363
            LF + E+ FG++ +IL +CAGVLD KYP LANTTVEDWD TF+VNT+GAFLCCREA NR
Sbjct: 89  QLFSRTEEEFGSKIHILAHCAGVLDPKYPILANTTVEDWDMTFNVNTKGAFLCCREATNR 148

Query: 364 LTRGSGGRIITITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANCIAPGPV 543
           L  G GGRII I++SLVG+  PGY+AY ASKAAVETM +I+AKELKGTGITANC+APGPV
Sbjct: 149 LAYGGGGRIIMISTSLVGAPTPGYAAYTASKAAVETMTRIVAKELKGTGITANCVAPGPV 208

Query: 544 ATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASDAGEWINGQIIRVNGGSVI 723
           ATELF+AGKTEE +KR+AD CPL R+GE  DI+ +VGF+ASDAGEWINGQ+IRVNGG V+
Sbjct: 209 ATELFFAGKTEETLKRIADACPLNRLGEPEDISKVVGFIASDAGEWINGQVIRVNGGFVV 268


>ref|XP_002282164.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Vitis
           vinifera]
          Length = 265

 Score =  353 bits (906), Expect = 3e-95
 Identities = 173/242 (71%), Positives = 208/242 (85%), Gaps = 1/242 (0%)
 Frame = +1

Query: 1   RGIGRAIALHLASIGAKLVINYASSPTEADRVASEINS-SSSNPDPQAIAVQANVSNPDQ 177
           RGIGRAIA+HL S+GA+LV+NYAS+   AD +AS++NS  SS+  P AIAVQANVS+PDQ
Sbjct: 25  RGIGRAIAIHLRSLGARLVLNYASNSALADALASQLNSPDSSSSHPVAIAVQANVSDPDQ 84

Query: 178 VKSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDRTFSVNTRGAFLCCREAA 357
           VK LFD+A++ FG+  +ILVNCAGVLD KYP+LANTTVEDWD TFS+NTRG+FL CREAA
Sbjct: 85  VKMLFDRAQQEFGS-IHILVNCAGVLDPKYPSLANTTVEDWDNTFSINTRGSFLVCREAA 143

Query: 358 NRLTRGSGGRIITITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANCIAPG 537
           NRL RG GGRII IT+S V +L PGY+AYAASKAAVETM KILAKELKGT +TANC+APG
Sbjct: 144 NRLIRGGGGRIILITTSAVAALTPGYAAYAASKAAVETMTKILAKELKGTSVTANCVAPG 203

Query: 538 PVATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASDAGEWINGQIIRVNGGS 717
           P+ATE+F+ GK+EE+IKR+ D CP+GR+GE  D+  LVGFLA+DAGEWINGQIIR+NGG 
Sbjct: 204 PIATEMFFEGKSEELIKRLVDACPMGRLGEPKDVTQLVGFLATDAGEWINGQIIRINGGF 263

Query: 718 VI 723
            +
Sbjct: 264 AV 265


>ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|222857542|gb|EEE95089.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  345 bits (885), Expect = 8e-93
 Identities = 167/240 (69%), Positives = 204/240 (85%)
 Frame = +1

Query: 1   RGIGRAIALHLASIGAKLVINYASSPTEADRVASEINSSSSNPDPQAIAVQANVSNPDQV 180
           RGIG+AIA+HLAS+GAKLVINY S+  +AD VA++INSS  +  P+AI  QANVS+P QV
Sbjct: 24  RGIGKAIAIHLASLGAKLVINYTSNKEQADLVANDINSSCVDNTPRAIVAQANVSDPAQV 83

Query: 181 KSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDRTFSVNTRGAFLCCREAAN 360
           K LFD+AE+ FG+Q +ILVNCAGVLD KYP++ NT++ED+D  FSVNTRGAFLCC+EAA+
Sbjct: 84  KFLFDEAERVFGSQLHILVNCAGVLDPKYPSIPNTSLEDFDHIFSVNTRGAFLCCKEAAS 143

Query: 361 RLTRGSGGRIITITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANCIAPGP 540
           RL  G GGRII ++SS+VG L PG+ AYAASKAAVET+I+ILAKELKGTGITANC+APGP
Sbjct: 144 RLKHGGGGRIIVLSSSMVGGLMPGFGAYAASKAAVETIIRILAKELKGTGITANCVAPGP 203

Query: 541 VATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASDAGEWINGQIIRVNGGSV 720
           VATE+++AGKTEE IK   +  PLGR+GET DIA +VGF+A+DA EWINGQ+IR NGG V
Sbjct: 204 VATEMYFAGKTEEQIKNNIESSPLGRLGETKDIAEVVGFMATDASEWINGQVIRANGGYV 263


>ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ricinus communis]
           gi|223535255|gb|EEF36932.1| short-chain type
           dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  345 bits (884), Expect = 1e-92
 Identities = 162/240 (67%), Positives = 204/240 (85%)
 Frame = +1

Query: 1   RGIGRAIALHLASIGAKLVINYASSPTEADRVASEINSSSSNPDPQAIAVQANVSNPDQV 180
           RGIG+AIALHLAS+GAKLVINY+S+  +AD VA ++NSSS    P+AIAVQANVS+P  V
Sbjct: 29  RGIGKAIALHLASLGAKLVINYSSNKEQADLVARDVNSSSEKDSPRAIAVQANVSDPTHV 88

Query: 181 KSLFDQAEKAFGTQTYILVNCAGVLDSKYPTLANTTVEDWDRTFSVNTRGAFLCCREAAN 360
           K LFD+AE+ FG Q ++ VN AG LDSKYP++A+T++E +D TFS+NTRGAFLCC+EAAN
Sbjct: 89  KFLFDEAERVFGCQVHVFVNSAGTLDSKYPSIADTSLEGFDLTFSINTRGAFLCCKEAAN 148

Query: 361 RLTRGSGGRIITITSSLVGSLYPGYSAYAASKAAVETMIKILAKELKGTGITANCIAPGP 540
           RL RG GGRI+ ++SS VG+L PG+ AYAASKAAVE M+KILAKELKGTGITANC+APGP
Sbjct: 149 RLKRGGGGRIVVLSSSQVGALRPGFGAYAASKAAVEAMVKILAKELKGTGITANCVAPGP 208

Query: 541 VATELFYAGKTEEMIKRVADGCPLGRIGETNDIAPLVGFLASDAGEWINGQIIRVNGGSV 720
           +AT+++++GKTEE I+R    CPLGR+GE  D+AP+VGFLA+DA EW+NGQ++R NGG V
Sbjct: 209 IATDMYFSGKTEEQIQRNIAECPLGRLGEPKDVAPIVGFLATDASEWVNGQVVRANGGYV 268


Top