BLASTX nr result

ID: Coptis21_contig00007406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007406
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272505.1| PREDICTED: CASP-like protein At3g53850 [Viti...   179   9e-43
ref|XP_003520906.1| PREDICTED: CASP-like protein At3g53850-like ...   173   4e-41
gb|AFK48759.1| unknown [Lotus japonicus]                              171   1e-40
ref|NP_001235139.1| uncharacterized protein LOC100306188 [Glycin...   170   3e-40
ref|XP_002309085.1| predicted protein [Populus trichocarpa] gi|2...   170   3e-40

>ref|XP_002272505.1| PREDICTED: CASP-like protein At3g53850 [Vitis vinifera]
           gi|297740318|emb|CBI30500.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score =  179 bits (453), Expect = 9e-43
 Identities = 89/154 (57%), Positives = 115/154 (74%), Gaps = 1/154 (0%)
 Frame = +3

Query: 114 MKSLSGGPGTVSGLLLRVGQILFSSASIGVTLSAFNSLGFSSFCWLLATMVLQLLWSSGL 293
           MK L G PGT SGL+LR+GQ +F++ASIGV +SA     +++FC+L+A+M LQ+LWS GL
Sbjct: 1   MKELIGSPGTASGLVLRIGQCMFAAASIGVMVSAIGFSNYTAFCYLIASMGLQVLWSFGL 60

Query: 294 ACFDVCALRIKRDIRDPGLVSFLVFGDWVIATLSLASACSSGAVTVLYATDWNVC-SQVP 470
           AC DV AL+IKRD+++P LVS  V GDWV ATLSLA+ACSS  V VLYA D + C +++ 
Sbjct: 61  ACLDVYALKIKRDLQNPVLVSLFVVGDWVTATLSLAAACSSAGVMVLYARDLDFCRAEMH 120

Query: 471 ISCIRLQVCVAMAFIAWFLTAISFLVTFWMLGSV 572
           I C R Q+ +A+AFI WF  AIS  V FW+L SV
Sbjct: 121 IPCSRFQISIALAFITWFFIAISSHVMFWILASV 154


>ref|XP_003520906.1| PREDICTED: CASP-like protein At3g53850-like [Glycine max]
          Length = 155

 Score =  173 bits (439), Expect = 4e-41
 Identities = 87/154 (56%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
 Frame = +3

Query: 114 MKSLSGGPGTVSGLLLRVGQILFSSASIGVTLSAFNSLGFSSFCWLLATMVLQLLWSSGL 293
           MK L GGPGT+SG LLR GQ  F +ASI + +++F    +++FC+L+A+M LQ+LWS GL
Sbjct: 2   MKRLLGGPGTISGFLLRFGQCAFGAASIAIMVTSFGFSSYTAFCYLIASMGLQVLWSFGL 61

Query: 294 ACFDVCALRIKRDIRDPGLVSFLVFGDWVIATLSLASACSSGAVTVLYATDWNVC-SQVP 470
           AC D+ ALR KRD+++P LVS  V GDWV ATLSLA+ACSS  + VLYA D  VC +   
Sbjct: 62  ACLDIYALRRKRDLQNPILVSLFVVGDWVTATLSLAAACSSAGIVVLYARDLTVCATSKR 121

Query: 471 ISCIRLQVCVAMAFIAWFLTAISFLVTFWMLGSV 572
           ++C R QV VAMAF+ W LTA+S  V FW+L SV
Sbjct: 122 LTCNRYQVSVAMAFLTWVLTAMSSHVMFWILASV 155


>gb|AFK48759.1| unknown [Lotus japonicus]
          Length = 154

 Score =  171 bits (434), Expect = 1e-40
 Identities = 87/153 (56%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
 Frame = +3

Query: 114 MKSLSGGPGTVSGLLLRVGQILFSSASIGVTLSAFNSLGFSSFCWLLATMVLQLLWSSGL 293
           MK L GGPGTVSG LLRVGQ  F +ASIG+ ++AF    +++FC+L+A+M LQ+LWS GL
Sbjct: 1   MKHLLGGPGTVSGCLLRVGQCAFGAASIGLMVTAFGFSTYTAFCYLIASMGLQVLWSLGL 60

Query: 294 ACFDVCALRIKRDIRDPGLVSFLVFGDWVIATLSLASACSSGAVTVLYATDWNVC-SQVP 470
           AC D+ ALR KRD+++P LVS  V GDWV +TLSLA+ACSS  + VLY  D ++C ++  
Sbjct: 61  ACLDIYALRKKRDLQNPILVSLFVVGDWVTSTLSLAAACSSAGIVVLYTRDLDLCATRKG 120

Query: 471 ISCIRLQVCVAMAFIAWFLTAISFLVTFWMLGS 569
             C R Q+ VAMAFI WF TA+S  V FW+L S
Sbjct: 121 NPCNRYQISVAMAFITWFFTAMSSHVMFWILAS 153


>ref|NP_001235139.1| uncharacterized protein LOC100306188 [Glycine max]
           gi|255627811|gb|ACU14250.1| unknown [Glycine max]
          Length = 155

 Score =  170 bits (431), Expect = 3e-40
 Identities = 84/154 (54%), Positives = 110/154 (71%), Gaps = 1/154 (0%)
 Frame = +3

Query: 114 MKSLSGGPGTVSGLLLRVGQILFSSASIGVTLSAFNSLGFSSFCWLLATMVLQLLWSSGL 293
           MK L GGPGT+SG LLR GQ  F +ASI + +++F    +++FC+L+A+M LQ+LWS GL
Sbjct: 2   MKRLLGGPGTISGFLLRFGQCAFGAASIAIMVTSFGFSSYTAFCYLIASMGLQVLWSFGL 61

Query: 294 ACFDVCALRIKRDIRDPGLVSFLVFGDWVIATLSLASACSSGAVTVLYATDWNVC-SQVP 470
           AC D+ ALR KRD+++P LVS  V GDWV ATLSLA+ACSS  + VLY  D   C +   
Sbjct: 62  ACLDIYALRRKRDLQNPILVSLFVVGDWVTATLSLAAACSSAGIVVLYTRDLTACATSKH 121

Query: 471 ISCIRLQVCVAMAFIAWFLTAISFLVTFWMLGSV 572
           ++C R Q+ VAMAF+ W LTA+S  V FW+L SV
Sbjct: 122 LTCNRYQISVAMAFVTWVLTAMSSHVMFWILASV 155


>ref|XP_002309085.1| predicted protein [Populus trichocarpa] gi|222855061|gb|EEE92608.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  170 bits (431), Expect = 3e-40
 Identities = 85/154 (55%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
 Frame = +3

Query: 114 MKSLSGGPGTVSGLLLRVGQILFSSASIGVTLSAFNSLGFSSFCWLLATMVLQLLWSSGL 293
           MK + GGPGTVSGLLLR+GQ +F++ASI +  SA     ++SFC+L+A+M LQLLWS GL
Sbjct: 1   MKEIIGGPGTVSGLLLRIGQCVFAAASISIMTSAIGFSSYTSFCYLIASMGLQLLWSFGL 60

Query: 294 ACFDVCALRIKRDIRDPGLVSFLVFGDWVIATLSLASACSSGAVTVLYATDWNVCSQVP- 470
           AC D+ ALR K+D+++P LVS  V GDWV A LSLA+ACSS  V VLYA D N C   P 
Sbjct: 61  ACLDIYALRRKKDLQNPVLVSLFVVGDWVTAMLSLAAACSSAGVVVLYARDMNFCKIHPD 120

Query: 471 ISCIRLQVCVAMAFIAWFLTAISFLVTFWMLGSV 572
           + C R ++ + +AFI W   +IS  V FW+L SV
Sbjct: 121 LPCSRYEISILLAFITWLQVSISSHVMFWILASV 154


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