BLASTX nr result

ID: Coptis21_contig00007403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007403
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|2...   154   4e-53
ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|2...   150   4e-52
ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267...   148   9e-51
ref|XP_002886939.1| hypothetical protein ARALYDRAFT_475645 [Arab...   143   4e-49
gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]        142   6e-49

>ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|222840921|gb|EEE78468.1|
           predicted protein [Populus trichocarpa]
          Length = 794

 Score =  154 bits (388), Expect(2) = 4e-53
 Identities = 73/97 (75%), Positives = 81/97 (83%), Gaps = 7/97 (7%)
 Frame = -2

Query: 468 WDPPTD-------NDNGDSGTRKRKSRWADDDTKPVIQLPDFMKEFTGSMDLDPEVQSLN 310
           WDPP D       N++  SGTRKRKSRWADD+ KPVIQLPDFMK+FTG ++ DPE+Q+LN
Sbjct: 126 WDPPADAGADGSNNNDSGSGTRKRKSRWADDEPKPVIQLPDFMKDFTGGIEFDPEIQALN 185

Query: 309 IRLLEISRMLSSGLPLDDLPEGARSPSPEPIYDNMGI 199
            RLLEISRML SGLPLDD PEGARSPSPEPIYDNMGI
Sbjct: 186 ARLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGI 222



 Score = 80.9 bits (198), Expect(2) = 4e-53
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -3

Query: 125 GIRINTREYRARERLNKERAEIITQLIKRNPAFRPPADYRP 3
           GIRINTREYRARERLNKER EII+Q+IKRNPAF+PPADYRP
Sbjct: 221 GIRINTREYRARERLNKERQEIISQIIKRNPAFKPPADYRP 261


>ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|222833932|gb|EEE72409.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  150 bits (380), Expect(2) = 4e-52
 Identities = 73/105 (69%), Positives = 81/105 (77%), Gaps = 15/105 (14%)
 Frame = -2

Query: 468 WDPPTD---------------NDNGDSGTRKRKSRWADDDTKPVIQLPDFMKEFTGSMDL 334
           WDPP D               N++  SGTRKRKSRWADD+ KPVIQLPDFMK+FTG ++ 
Sbjct: 41  WDPPADSGTDGGGGGSSSNTNNNDSGSGTRKRKSRWADDEPKPVIQLPDFMKDFTGGIEF 100

Query: 333 DPEVQSLNIRLLEISRMLSSGLPLDDLPEGARSPSPEPIYDNMGI 199
           DPE+Q+LN RLLEISRML SGLPLDD PEGARSPSPEPIYDNMGI
Sbjct: 101 DPEIQALNARLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGI 145



 Score = 80.9 bits (198), Expect(2) = 4e-52
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -3

Query: 125 GIRINTREYRARERLNKERAEIITQLIKRNPAFRPPADYRP 3
           GIRINTREYRARERLNKER EII+Q+IKRNPAF+PPADYRP
Sbjct: 144 GIRINTREYRARERLNKERQEIISQIIKRNPAFKPPADYRP 184


>ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267539 [Vitis vinifera]
          Length = 794

 Score =  148 bits (373), Expect(2) = 9e-51
 Identities = 70/97 (72%), Positives = 80/97 (82%), Gaps = 7/97 (7%)
 Frame = -2

Query: 468 WDPPTDNDNGDSG-------TRKRKSRWADDDTKPVIQLPDFMKEFTGSMDLDPEVQSLN 310
           WDPP+D+ N  +G        RKRKSRWADD+ KP+IQLPDFMK+FTG ++ DPE+Q+LN
Sbjct: 120 WDPPSDSGNQTAGEAAEGTGARKRKSRWADDEPKPLIQLPDFMKDFTGGIEFDPEIQALN 179

Query: 309 IRLLEISRMLSSGLPLDDLPEGARSPSPEPIYDNMGI 199
            RLLEISRML SGLPLDD PEGARSPSPEPIYDNMGI
Sbjct: 180 SRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGI 216



 Score = 79.0 bits (193), Expect(2) = 9e-51
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = -3

Query: 125 GIRINTREYRARERLNKERAEIITQLIKRNPAFRPPADYRP 3
           GIRINTREYRARERLN+ER EII+Q++KRNPAF+PPADYRP
Sbjct: 215 GIRINTREYRARERLNRERQEIISQILKRNPAFKPPADYRP 255


>ref|XP_002886939.1| hypothetical protein ARALYDRAFT_475645 [Arabidopsis lyrata subsp.
           lyrata] gi|297332780|gb|EFH63198.1| hypothetical protein
           ARALYDRAFT_475645 [Arabidopsis lyrata subsp. lyrata]
          Length = 782

 Score =  143 bits (361), Expect(2) = 4e-49
 Identities = 67/92 (72%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
 Frame = -2

Query: 468 WDPPTDNDNGDS--GTRKRKSRWADDDTKPVIQLPDFMKEFTGSMDLDPEVQSLNIRLLE 295
           WDPP      DS  G RKRKSRWADD+ KP IQLPDFMK+FTG ++ DPE+Q+LN RLLE
Sbjct: 93  WDPPPSEGGTDSEPGIRKRKSRWADDEPKPQIQLPDFMKDFTGGIEFDPEIQALNSRLLE 152

Query: 294 ISRMLSSGLPLDDLPEGARSPSPEPIYDNMGI 199
           ISRML SG+PLDD PEG RSPSPEP+YDNMGI
Sbjct: 153 ISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGI 184



 Score = 78.2 bits (191), Expect(2) = 4e-49
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = -3

Query: 125 GIRINTREYRARERLNKERAEIITQLIKRNPAFRPPADYRP 3
           GIRINTREYRARERLN+ER EII Q+IK+NPAF+PPADYRP
Sbjct: 183 GIRINTREYRARERLNRERQEIIAQIIKKNPAFKPPADYRP 223


>gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]
          Length = 806

 Score =  142 bits (359), Expect(2) = 6e-49
 Identities = 69/101 (68%), Positives = 79/101 (78%), Gaps = 11/101 (10%)
 Frame = -2

Query: 468 WDPPTD-----------NDNGDSGTRKRKSRWADDDTKPVIQLPDFMKEFTGSMDLDPEV 322
           WDPP             ND+G +GTRKRKSRWADD+ KP IQLPDFMK+FTG ++ DPE+
Sbjct: 99  WDPPPSESINNPSAEGGNDSG-TGTRKRKSRWADDEPKPQIQLPDFMKDFTGGIEFDPEI 157

Query: 321 QSLNIRLLEISRMLSSGLPLDDLPEGARSPSPEPIYDNMGI 199
           Q+LN RLLEISRML SG+PLDD PEG RSPSPEP+YDNMGI
Sbjct: 158 QALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGI 198



 Score = 78.2 bits (191), Expect(2) = 6e-49
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = -3

Query: 125 GIRINTREYRARERLNKERAEIITQLIKRNPAFRPPADYRP 3
           GIRINTREYRARERLN+ER EII Q+IK+NPAF+PPADYRP
Sbjct: 197 GIRINTREYRARERLNRERQEIIAQIIKKNPAFKPPADYRP 237


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