BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007400
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305841.1| predicted protein [Populus trichocarpa] gi|2...   136   5e-49
ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g...   132   2e-48
ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-l...   134   5e-48
ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [...   132   5e-48
ref|XP_003556911.1| PREDICTED: WD repeat-containing protein 55-l...   131   7e-48

>ref|XP_002305841.1| predicted protein [Populus trichocarpa] gi|222848805|gb|EEE86352.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  136 bits (343), Expect(2) = 5e-49
 Identities = 64/80 (80%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   SLRKNKVLTQSEFSEDEPLSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSN 181
           +LR NK+ +QSEFSE+E LSVV+MKNGRKVICG+QNG LLLYSWG+FKDCSDRFTG   N
Sbjct: 163 NLRSNKIQSQSEFSEEELLSVVIMKNGRKVICGSQNGTLLLYSWGFFKDCSDRFTGLSPN 222

Query: 182 SIDVLLKLDEDRVITGTENG 241
           SID LLKLDEDRVITG+ENG
Sbjct: 223 SIDALLKLDEDRVITGSENG 242



 Score = 83.2 bits (204), Expect(2) = 5e-49
 Identities = 37/43 (86%), Positives = 42/43 (97%)
 Frame = +3

Query: 312 LIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 440
           L+GILPNRIIQP+AEHSEYP+E LA+SHDRKFLGSISHDQ+LK
Sbjct: 246 LLGILPNRIIQPLAEHSEYPIEHLAFSHDRKFLGSISHDQVLK 288


>ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula]
           gi|355510141|gb|AES91283.1| WD-40 repeat protein
           [Medicago truncatula]
          Length = 420

 Score =  132 bits (331), Expect(2) = 2e-48
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = +2

Query: 2   SLRKNKVLTQSEFSEDEPLSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSN 181
           +LR+NKV  QSEFSEDE LSVVLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF    SN
Sbjct: 227 NLRRNKVQAQSEFSEDELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASN 286

Query: 182 SIDVLLKLDEDRVITGTENG 241
           SID +LKLDEDR+ITG+ENG
Sbjct: 287 SIDTMLKLDEDRIITGSENG 306



 Score = 85.5 bits (210), Expect(2) = 2e-48
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +3

Query: 312 LIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 440
           L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLK
Sbjct: 310 LVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLK 352


>ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max]
          Length = 352

 Score =  134 bits (336), Expect(2) = 5e-48
 Identities = 63/80 (78%), Positives = 71/80 (88%)
 Frame = +2

Query: 2   SLRKNKVLTQSEFSEDEPLSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSN 181
           +LR+NKV  QSEFSEDE LSVVLMKNGRKV+CG+Q GV+LLYSWG FKDCSDRFT   SN
Sbjct: 163 NLRRNKVQAQSEFSEDELLSVVLMKNGRKVVCGSQTGVILLYSWGCFKDCSDRFTDLSSN 222

Query: 182 SIDVLLKLDEDRVITGTENG 241
           SID +LKLDEDR+ITG+ENG
Sbjct: 223 SIDAMLKLDEDRIITGSENG 242



 Score = 82.4 bits (202), Expect(2) = 5e-48
 Identities = 37/43 (86%), Positives = 42/43 (97%)
 Frame = +3

Query: 312 LIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 440
           L+GILPNR+IQPIAEHSEYPVE LA+SHD+KFLGSI+HDQMLK
Sbjct: 246 LVGILPNRVIQPIAEHSEYPVECLAFSHDKKFLGSIAHDQMLK 288


>ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|297743547|emb|CBI36414.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  132 bits (333), Expect(2) = 5e-48
 Identities = 63/80 (78%), Positives = 70/80 (87%)
 Frame = +2

Query: 2   SLRKNKVLTQSEFSEDEPLSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSN 181
           +LR+NKV  QSEFSEDE LSVV+MKNGRKVICGTQ+G LLLYSWG+FKDCSDRF     N
Sbjct: 164 NLRRNKVQVQSEFSEDELLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPN 223

Query: 182 SIDVLLKLDEDRVITGTENG 241
           S+D LLKLDEDRVITG+ENG
Sbjct: 224 SVDALLKLDEDRVITGSENG 243



 Score = 83.6 bits (205), Expect(2) = 5e-48
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +3

Query: 312 LIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 440
           L+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLK
Sbjct: 247 LVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLK 289


>ref|XP_003556911.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max]
          Length = 313

 Score =  131 bits (329), Expect(2) = 7e-48
 Identities = 61/79 (77%), Positives = 70/79 (88%)
 Frame = +2

Query: 2   SLRKNKVLTQSEFSEDEPLSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSN 181
           +LR+NKV  QSEFSEDE LSVVLMKNGRKV+CG+Q G++LLYSWG FKDCSDRFT   SN
Sbjct: 125 NLRRNKVQAQSEFSEDELLSVVLMKNGRKVVCGSQTGIILLYSWGCFKDCSDRFTDLSSN 184

Query: 182 SIDVLLKLDEDRVITGTEN 238
           SID +LKLDEDR+ITG+EN
Sbjct: 185 SIDAMLKLDEDRIITGSEN 203



 Score = 84.7 bits (208), Expect(2) = 7e-48
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +3

Query: 312 LIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 440
           L+GILPNR+IQPIAEHSEYPVE LA+SHDRKFLGSISHDQMLK
Sbjct: 208 LVGILPNRVIQPIAEHSEYPVECLAFSHDRKFLGSISHDQMLK 250