BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007399
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-48
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   153   2e-48
ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-47
ref|XP_003594946.1| Pentatricopeptide repeat-containing protein ...   157   2e-47
ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-46

>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
           protein product [Vitis vinifera]
          Length = 821

 Score =  153 bits (386), Expect(3) = 2e-48
 Identities = 73/110 (66%), Positives = 93/110 (84%), Gaps = 2/110 (1%)
 Frame = +3

Query: 447 NDQVIEVMIWILGRESQHSIVCKLFDAVPVEDYSLDVRSFTSVLHAYAWTGKYETAL--F 620
           ++Q++E+M+ ILGRESQHS+  +L D + VE+YSLDVR++T++LHAY+  GKYE A+  F
Sbjct: 173 DNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMF 232

Query: 621 EAIKAKGLKPTLVTYNVMLDVYGKMGRSWNMILELLDEIRNNGLEFDEFT 770
           E ++  GL PTLVTYNVMLDVYGKMGRSWN IL LLDE+R+NGLEFDEFT
Sbjct: 233 EKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFT 282



 Score = 64.7 bits (156), Expect(3) = 2e-48
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = +1

Query: 223 SLEFLSAKGKSLLNLIINNPISELKCFFNSVESELCEVDVVSLLKGLEISGN 378
           S+EFLS KGK LLN I+ +P+  L  FF+SV+ EL +VD+VSLLKGL++SGN
Sbjct: 99  SVEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGN 150



 Score = 21.9 bits (45), Expect(3) = 2e-48
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 383 KAVLLFQWVHSNLNRENTR 439
           +AVLLF+W   NL   N +
Sbjct: 153 RAVLLFKWAILNLYSRNEK 171


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  153 bits (386), Expect(3) = 2e-48
 Identities = 73/110 (66%), Positives = 93/110 (84%), Gaps = 2/110 (1%)
 Frame = +3

Query: 447 NDQVIEVMIWILGRESQHSIVCKLFDAVPVEDYSLDVRSFTSVLHAYAWTGKYETAL--F 620
           ++Q++E+M+ ILGRESQHS+  +L D + VE+YSLDVR++T++LHAY+  GKYE A+  F
Sbjct: 173 DNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMF 232

Query: 621 EAIKAKGLKPTLVTYNVMLDVYGKMGRSWNMILELLDEIRNNGLEFDEFT 770
           E ++  GL PTLVTYNVMLDVYGKMGRSWN IL LLDE+R+NGLEFDEFT
Sbjct: 233 EKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFT 282



 Score = 64.7 bits (156), Expect(3) = 2e-48
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = +1

Query: 223 SLEFLSAKGKSLLNLIINNPISELKCFFNSVESELCEVDVVSLLKGLEISGN 378
           S+EFLS KGK LLN I+ +P+  L  FF+SV+ EL +VD+VSLLKGL++SGN
Sbjct: 99  SVEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGN 150



 Score = 21.9 bits (45), Expect(3) = 2e-48
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 383 KAVLLFQWVHSNLNRENTR 439
           +AVLLF+W   NL   N +
Sbjct: 153 RAVLLFKWAILNLYSRNEK 171


>ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  157 bits (398), Expect(2) = 1e-47
 Identities = 77/110 (70%), Positives = 94/110 (85%), Gaps = 2/110 (1%)
 Frame = +3

Query: 447 NDQVIEVMIWILGRESQHSIVCKLFDAVPVEDYSLDVRSFTSVLHAYAWTGKYETA--LF 620
           ++QV+E+M+ ILGRESQHSI  KLFD +PVE YSLDVR++T++LHAYA +GKY+ A  LF
Sbjct: 180 DNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLF 239

Query: 621 EAIKAKGLKPTLVTYNVMLDVYGKMGRSWNMILELLDEIRNNGLEFDEFT 770
           + ++  GL PTLVTYNVMLDVYGKMGRSW  ILELLDE+R+ GLEFDEFT
Sbjct: 240 DKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFT 289



 Score = 58.9 bits (141), Expect(2) = 1e-47
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = +1

Query: 232 FLSAKGKSLLNLIINNPISELKCFFNSVESELCEVDVVSLLKGLEISGN 378
           FLS KGK LLN ++ +P+ EL  FFNSV+ EL E D  SLLK L++SGN
Sbjct: 108 FLSDKGKLLLNSVVGSPLHELNDFFNSVKFELLEADFPSLLKALDLSGN 156


>ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359380|gb|ABN05846.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355483994|gb|AES65197.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  157 bits (396), Expect(3) = 2e-47
 Identities = 77/110 (70%), Positives = 94/110 (85%), Gaps = 2/110 (1%)
 Frame = +3

Query: 447 NDQVIEVMIWILGRESQHSIVCKLFDAVPVEDYSLDVRSFTSVLHAYAWTGKYETAL--F 620
           +DQ +E M+ +LGRESQ+SI  KLFD +PVE+YSLDV++ T+VLHAYA TGKY+ A+  F
Sbjct: 201 DDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIF 260

Query: 621 EAIKAKGLKPTLVTYNVMLDVYGKMGRSWNMILELLDEIRNNGLEFDEFT 770
           E +K  GL PTLVTYNVMLDVYGKMGR+W+MILELLDE+R+ GLEFDEFT
Sbjct: 261 EKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFT 310



 Score = 55.5 bits (132), Expect(3) = 2e-47
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = +1

Query: 232 FLSAKGKSLLNLIINNPISELKCFFNSVESELCEVDVVSLLKGLEISGN 378
           FLS K K +LN I+ + +++L  FFNSV+ EL E D+  LLKGL++SGN
Sbjct: 130 FLSGKSKFMLNCIVGSSLNDLIEFFNSVKGELLESDITGLLKGLDLSGN 178



 Score = 24.3 bits (51), Expect(3) = 2e-47
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 380 DKAVLLFQWVHSNLNRENTR 439
           ++A LLF+WV  N   EN +
Sbjct: 180 ERAFLLFEWVWLNFGSENMK 199


>ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  155 bits (393), Expect(2) = 3e-46
 Identities = 77/110 (70%), Positives = 93/110 (84%), Gaps = 2/110 (1%)
 Frame = +3

Query: 447 NDQVIEVMIWILGRESQHSIVCKLFDAVPVEDYSLDVRSFTSVLHAYAWTGKYETA--LF 620
           ++QV+E+M+ ILGRESQHSI  KLFD +PVE YSLDVR++T++LH+YA TGKY+ A  LF
Sbjct: 179 DNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLF 238

Query: 621 EAIKAKGLKPTLVTYNVMLDVYGKMGRSWNMILELLDEIRNNGLEFDEFT 770
             +K  GL PTLVTYNVMLDVYGKMGRSW+ ILELLDE+R+ GLE DEFT
Sbjct: 239 GKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFT 288



 Score = 55.8 bits (133), Expect(2) = 3e-46
 Identities = 28/49 (57%), Positives = 35/49 (71%)
 Frame = +1

Query: 232 FLSAKGKSLLNLIINNPISELKCFFNSVESELCEVDVVSLLKGLEISGN 378
           FLS KGK L + I+ +P+ EL  FFNSV+ EL E D  SLLK L++SGN
Sbjct: 107 FLSDKGKLLFSSIVGSPLHELNDFFNSVKFELLEADFPSLLKALDLSGN 155