BLASTX nr result

ID: Coptis21_contig00007382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007382
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264265.1| PREDICTED: selT-like protein [Vitis vinifera...   251   4e-64
emb|CAN83419.1| hypothetical protein VITISV_024323 [Vitis vinifera]   249   9e-64
ref|XP_003544887.1| PREDICTED: selT-like protein-like [Glycine max]   241   4e-61
gb|ADN33788.1| selenoprotein t precursor [Cucumis melo subsp. me...   236   1e-59
ref|XP_002314095.1| predicted protein [Populus trichocarpa] gi|1...   236   1e-59

>ref|XP_002264265.1| PREDICTED: selT-like protein [Vitis vinifera]
           gi|296083168|emb|CBI22804.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  251 bits (640), Expect = 4e-64
 Identities = 130/227 (57%), Positives = 156/227 (68%), Gaps = 5/227 (2%)
 Frame = +1

Query: 52  MDRVQXXXXXXXXXXFCSDILNLFXXXXXXXXXXXXXXXXXXXXXXXXXTLDFPTQT--- 222
           MDR Q          F SDI+NLF                          LDFPTQ    
Sbjct: 1   MDRAQLLLVGLPLFLFFSDIINLFTPPPPKPPPHHHHQQPQPKPQSAP--LDFPTQKESG 58

Query: 223 --AIRSGSTININFCSSCSYRGTAETIKKGLETAFPGADVVLANYPPALPKRILSKAVPV 396
              I  G+T+NINFCSSCSYRG A T+K  LE+ FPG  VVLANYPP LPKR+LSK VPV
Sbjct: 59  IGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKVVPV 118

Query: 397 FQVGVMGIVLGGEHIFPRLGYMTPPAWYFSMRQNRFGTIATAWLLGNVMQSFLQSSGAFE 576
            Q+GV+GIV+ GE IFPRLG++ PP WY+S+R NRFGTI+T WLLGN +QSFLQSSGAFE
Sbjct: 119 VQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGTISTTWLLGNFLQSFLQSSGAFE 178

Query: 577 VYYNGELIFSKLKEQRFPSEIELRELLNRKLASSRVVDGLRADGLWS 717
           VY NGEL+FSKLK+QRFP EIEL++L+ ++L +SR+VD + A G+WS
Sbjct: 179 VYCNGELVFSKLKQQRFPGEIELKDLVGQRLVASRIVDDVGA-GVWS 224


>emb|CAN83419.1| hypothetical protein VITISV_024323 [Vitis vinifera]
          Length = 232

 Score =  249 bits (637), Expect = 9e-64
 Identities = 130/230 (56%), Positives = 156/230 (67%), Gaps = 8/230 (3%)
 Frame = +1

Query: 52  MDRVQXXXXXXXXXXFCSDILNLFXXXXXXXXXXXXXXXXXXXXXXXXXT---LDFPTQT 222
           MDR Q          F SDI+NLF                             LDFPTQ 
Sbjct: 1   MDRAQLLLVGLPLFLFFSDIINLFTPPPPKPPPHHHHHHHHHQQPQPKPQSAPLDFPTQK 60

Query: 223 -----AIRSGSTININFCSSCSYRGTAETIKKGLETAFPGADVVLANYPPALPKRILSKA 387
                 I  G+T+NINFCSSCSYRG A T+K  LE+ FPG  VVLANYPP LPKR+LSK 
Sbjct: 61  ESGIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKV 120

Query: 388 VPVFQVGVMGIVLGGEHIFPRLGYMTPPAWYFSMRQNRFGTIATAWLLGNVMQSFLQSSG 567
           VPV Q+GV+GIV+ GE IFPRLG++ PP WY+S+R NRFGTI+T WLLGN +QSFLQSSG
Sbjct: 121 VPVVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGTISTTWLLGNFLQSFLQSSG 180

Query: 568 AFEVYYNGELIFSKLKEQRFPSEIELRELLNRKLASSRVVDGLRADGLWS 717
           AFEVY NGEL+FSKLK+QRFP EIEL++L+ ++L +SR+VD + A G+WS
Sbjct: 181 AFEVYCNGELVFSKLKQQRFPGEIELKDLVGQRLVASRIVDDVGA-GVWS 229


>ref|XP_003544887.1| PREDICTED: selT-like protein-like [Glycine max]
          Length = 225

 Score =  241 bits (614), Expect = 4e-61
 Identities = 118/221 (53%), Positives = 152/221 (68%), Gaps = 6/221 (2%)
 Frame = +1

Query: 52  MDRVQXXXXXXXXXXFCSDILNLFXXXXXXXXXXXXXXXXXXXXXXXXXTLDFPTQTAIR 231
           MDR Q          FCSD+ +LF                         T+DFP +    
Sbjct: 1   MDRAQLLLLGVPLFLFCSDLFSLFTHHPPPPPHHHHHHHHPHPPHHHQ-TIDFPPEKPTN 59

Query: 232 S------GSTININFCSSCSYRGTAETIKKGLETAFPGADVVLANYPPALPKRILSKAVP 393
           +      G+T++INFCSSCSY+GTA T+K  LE AFPG +V+LANYPP LPKR+LSK VP
Sbjct: 60  NIATPGLGNTVHINFCSSCSYKGTAVTMKNMLEIAFPGTEVILANYPPTLPKRLLSKLVP 119

Query: 394 VFQVGVMGIVLGGEHIFPRLGYMTPPAWYFSMRQNRFGTIATAWLLGNVMQSFLQSSGAF 573
           V Q+GV+G+V+ GEHIFP LG++ PP WY+++R NRFGTIA+ WLLGN +QSFLQSSGAF
Sbjct: 120 VVQIGVIGVVVAGEHIFPMLGFVAPPPWYYNLRANRFGTIASTWLLGNALQSFLQSSGAF 179

Query: 574 EVYYNGELIFSKLKEQRFPSEIELRELLNRKLASSRVVDGL 696
           EVY+NGEL+FSKLKE RFP EIEL++L+ +K+ +S  V+G+
Sbjct: 180 EVYFNGELVFSKLKEGRFPGEIELKDLITKKMTNSIRVNGV 220


>gb|ADN33788.1| selenoprotein t precursor [Cucumis melo subsp. melo]
           gi|307136469|gb|ADN34273.1| selenoprotein t [Cucumis
           melo subsp. melo]
          Length = 227

 Score =  236 bits (602), Expect = 1e-59
 Identities = 115/177 (64%), Positives = 139/177 (78%), Gaps = 5/177 (2%)
 Frame = +1

Query: 202 LDFPTQT-----AIRSGSTININFCSSCSYRGTAETIKKGLETAFPGADVVLANYPPALP 366
           L+FPT+       I  GS ININFC SCSYRGTA  +K  LE++FPG +V+LANYPP  P
Sbjct: 54  LEFPTEKRSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFP 113

Query: 367 KRILSKAVPVFQVGVMGIVLGGEHIFPRLGYMTPPAWYFSMRQNRFGTIATAWLLGNVMQ 546
           KR+LSK VPV Q G++GI++ GEHIFPRLG M PP WY+S+R NRFG+IA+ WL GN +Q
Sbjct: 114 KRLLSKVVPVVQFGIIGIIVAGEHIFPRLG-MVPPPWYYSLRANRFGSIASTWLFGNFVQ 172

Query: 547 SFLQSSGAFEVYYNGELIFSKLKEQRFPSEIELRELLNRKLASSRVVDGLRADGLWS 717
           SFLQSSGAFEVY NGE++FSKLKEQRFP EIELR+L+ RKL+ SR VD   + G+WS
Sbjct: 173 SFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVD--NSGGVWS 227


>ref|XP_002314095.1| predicted protein [Populus trichocarpa] gi|118482112|gb|ABK92987.1|
           unknown [Populus trichocarpa]
           gi|222850503|gb|EEE88050.1| predicted protein [Populus
           trichocarpa]
          Length = 225

 Score =  236 bits (601), Expect = 1e-59
 Identities = 122/224 (54%), Positives = 149/224 (66%), Gaps = 9/224 (4%)
 Frame = +1

Query: 52  MDRVQXXXXXXXXXXFCSDILNLFXXXXXXXXXXXXXXXXXXXXXXXXX-----TLDFPT 216
           MDR Q           C+D+++LF                              TL  PT
Sbjct: 1   MDRAQILLVGLPLFLLCTDLIHLFTPPPPKPPPHHHHHPHPHHHHKQPPVGAHETLGSPT 60

Query: 217 QT----AIRSGSTININFCSSCSYRGTAETIKKGLETAFPGADVVLANYPPALPKRILSK 384
           Q      I  GST+ I+FC+SCSYRG A T+KK LET FPG DVVL NYPP+LPKR+ +K
Sbjct: 61  QKPVVGGIGLGSTVRIDFCASCSYRGNAVTMKKMLETQFPGIDVVLVNYPPSLPKRVAAK 120

Query: 385 AVPVFQVGVMGIVLGGEHIFPRLGYMTPPAWYFSMRQNRFGTIATAWLLGNVMQSFLQSS 564
            VPVFQ+GVMGIVLGGE IFP LG MTPP WY+S+R N+FGTIA+ WLLGN ++SFLQSS
Sbjct: 121 LVPVFQIGVMGIVLGGEQIFPMLGLMTPPPWYYSLRANKFGTIASTWLLGNALRSFLQSS 180

Query: 565 GAFEVYYNGELIFSKLKEQRFPSEIELRELLNRKLASSRVVDGL 696
           GAFEVY N EL+FSKL+E+RFP EIEL++L+ R+LA+S + D L
Sbjct: 181 GAFEVYCNDELVFSKLREERFPGEIELKDLVGRRLANSGISDML 224


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