BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007375
         (1735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aesti...   516   e-144
gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel...   499   e-139
gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aesti...   493   e-137
ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synt...   487   e-135
gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humul...   484   e-134

>gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
            palaestina]
          Length = 364

 Score =  516 bits (1329), Expect = e-144
 Identities = 269/375 (71%), Positives = 312/375 (83%), Gaps = 1/375 (0%)
 Frame = +2

Query: 275  MSSATAS-LHLSTWVQSCSKFNNHAAGGSVYSSTSLILKNIPNTPKKKRPMVSYTSPVSA 451
            M++ T+S LH  +W      +N+         ST  I  N P +PK  +P+ S+ +P+S+
Sbjct: 1    MATITSSPLHFFSW-----SYNHGTLTPRSIPSTCFIFHNKPVSPKSTKPL-SFKTPISS 54

Query: 452  VHLTKGGEKVKEGSNTQGEMTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMRYSLL 631
            V+LT    K K+      EMTFDF +Y+L KG SVNQALD+A+ I+EPEKIHEAMRYSLL
Sbjct: 55   VYLTNTENKGKDK-----EMTFDFKAYLLEKGKSVNQALDNAILIREPEKIHEAMRYSLL 109

Query: 632  AGGKRVRPILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGMPTN 811
            AGGKRVRPILCIAA ELVGGNES+AMP+ACAVEMIHTMSLIHDDLPCMDNDDLRRG PTN
Sbjct: 110  AGGKRVRPILCIAASELVGGNESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 169

Query: 812  HKVFGENVAVLAGDALLAFAFEHMANATVGAAPSRIIQAIGELAKDIGSEGLVAGQVVDI 991
            HKV+GENVAVLAGDALLAFAFE++ANATVG +PSR+++AIGELAKDIGSEGLVAGQVVDI
Sbjct: 170  HKVYGENVAVLAGDALLAFAFEYVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDI 229

Query: 992  QSAGVSDVGLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLLFQVV 1171
             SAG+S++GL+HLE+IH+HKTAALLE SVVIGAILGGG+++QV +LRKFARCIGLLFQVV
Sbjct: 230  LSAGMSNIGLDHLEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVV 289

Query: 1172 DDILDVTKSSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFDPEKX 1351
            DDILDVT SS+ELGKTAGKDLVADKATYPKLLGLEKAREFAEKL  +A +QL EFDPE+ 
Sbjct: 290  DDILDVTMSSEELGKTAGKDLVADKATYPKLLGLEKAREFAEKLKNEAIEQLDEFDPEEA 349

Query: 1352 XXXXXXXEYIAHRQN 1396
                   EYIAHRQN
Sbjct: 350  APLLALAEYIAHRQN 364


>gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
          Length = 373

 Score =  499 bits (1285), Expect = e-139
 Identities = 266/372 (71%), Positives = 304/372 (81%), Gaps = 5/372 (1%)
 Frame = +2

Query: 296  LHLSTWVQSCSKFNNHAAGGSVYSSTSLIL---KNIPNT--PKKKRPMVSYTSPVSAVHL 460
            ++LSTWVQ+CS FN      S+ + +  IL   KNIP +  P K+R  +S  S VSAV L
Sbjct: 4    VNLSTWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISSVS-VSAV-L 61

Query: 461  TKGGEKVKEGSNTQGEMTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMRYSLLAGG 640
            TK     +E  +     TF+F +Y+L K NSVNQALD AVS+K+P KIHEAMRYSLLAGG
Sbjct: 62   TKEDTLREEEESESEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGG 121

Query: 641  KRVRPILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGMPTNHKV 820
            KRVRP+LCIAACELVGG ESIAMPAAC+VEMIHTMSLIHDDLPCMDNDDLRRG PTNHKV
Sbjct: 122  KRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV 181

Query: 821  FGENVAVLAGDALLAFAFEHMANATVGAAPSRIIQAIGELAKDIGSEGLVAGQVVDIQSA 1000
            FGE+VAVLAGDALLAF+FEH+A +T G  P+RI++AIGELA+ IG+EGLVAGQVVDI S 
Sbjct: 182  FGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSE 241

Query: 1001 GVSDVGLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLLFQVVDDI 1180
            G+SDVGLEHLE+IH+HKTAALLEG+VV+GAILGGGS ++V KLR FAR IGLLFQVVDDI
Sbjct: 242  GLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDI 301

Query: 1181 LDVTKSSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFDPEKXXXX 1360
            LDVTKSS+ELGKTAGKDLVADK TYPKL+G+EK+REFAEKL KDA DQLA FD EK    
Sbjct: 302  LDVTKSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPL 361

Query: 1361 XXXXEYIAHRQN 1396
                 YIAHRQN
Sbjct: 362  IALANYIAHRQN 373


>gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
            palaestina]
          Length = 310

 Score =  493 bits (1269), Expect = e-137
 Identities = 246/296 (83%), Positives = 273/296 (92%)
 Frame = +2

Query: 509  MTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMRYSLLAGGKRVRPILCIAACELVG 688
            M FDF +Y+L KG SVNQALD+AV I+EPEKIHEAMRYSLLAGGKRVRPILCIAACELVG
Sbjct: 15   MDFDFKAYLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAGGKRVRPILCIAACELVG 74

Query: 689  GNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGMPTNHKVFGENVAVLAGDALLAF 868
            GNES+AMP+ACAVEMIHTMSL+HDDLPCMDNDDLRRG PTNHKV+GENVAVLAGDALLAF
Sbjct: 75   GNESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAF 134

Query: 869  AFEHMANATVGAAPSRIIQAIGELAKDIGSEGLVAGQVVDIQSAGVSDVGLEHLEYIHIH 1048
            AFE++ANATVG +PSR+I+AIGELAKDIGSEGLVAGQVVDI SAG+S++GL+HLE+IH+H
Sbjct: 135  AFEYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLH 194

Query: 1049 KTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGK 1228
            KTAALLE SVVIGAILGGG+++QV +LRKFARCIGLLFQVVDDILDVT SS+ELGKTAGK
Sbjct: 195  KTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGK 254

Query: 1229 DLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFDPEKXXXXXXXXEYIAHRQN 1396
            DLVADKATYPKLLGLEKAREFAEKL  +A +QL EFDPEK        E+IAHRQN
Sbjct: 255  DLVADKATYPKLLGLEKAREFAEKLKNEATEQLDEFDPEKAAPLLALAEFIAHRQN 310


>ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
            [Vitis vinifera]
          Length = 368

 Score =  487 bits (1253), Expect = e-135
 Identities = 257/372 (69%), Positives = 298/372 (80%), Gaps = 4/372 (1%)
 Frame = +2

Query: 293  SLHLSTWVQSCSKFNNHAAGGSVYSST-SLILKNIPNTPKKKRPMVSYTS--PVSAVHLT 463
            +++L TWV +   FN+   GG + S   S +L  + N      PM+S  S  P+S V + 
Sbjct: 3    TVNLGTWVHTSYVFNH---GGRLKSPVLSRMLHPLKNP---SFPMLSQRSGRPMSLVAVL 56

Query: 464  KGGEKVKEGSNTQGEM-TFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMRYSLLAGG 640
               E V+ G   + E   F+F +YIL K NSVN+ALDDAV I+EP K+HE+MRYSLLAGG
Sbjct: 57   TKEEMVRGGDTPEEEKPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGG 116

Query: 641  KRVRPILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGMPTNHKV 820
            KRVRP+LCIAACELVGG+E+ AMPAACAVEMIHTMSL+HDDLPCMDNDDLRRG PTNHKV
Sbjct: 117  KRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKV 176

Query: 821  FGENVAVLAGDALLAFAFEHMANATVGAAPSRIIQAIGELAKDIGSEGLVAGQVVDIQSA 1000
            FGENVA+LAGDALLAFAFEHMA ATVG  P  I++A+GELAK IGSEGLVAGQVVDI S 
Sbjct: 177  FGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSE 236

Query: 1001 GVSDVGLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLLFQVVDDI 1180
            G+ DVGLEHLEYIH+HKTAALLEG+VV+GAILGGGS +++ KLRKFARCIGLLFQVVDDI
Sbjct: 237  GLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDI 296

Query: 1181 LDVTKSSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFDPEKXXXX 1360
            LDVTKSS+ELGKTAGKDLVADK TYPKLLG+EK+RE AE+L KDA DQL+ FDP+K    
Sbjct: 297  LDVTKSSQELGKTAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPL 356

Query: 1361 XXXXEYIAHRQN 1396
                 YIA+RQN
Sbjct: 357  IALSNYIAYRQN 368


>gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
          Length = 369

 Score =  484 bits (1245), Expect = e-134
 Identities = 256/370 (69%), Positives = 307/370 (82%), Gaps = 7/370 (1%)
 Frame = +2

Query: 308  TWVQSCSKFNNHAAGGSVYSSTSLI----LKNIP---NTPKKKRPMVSYTSPVSAVHLTK 466
            TWVQ+CS FN   AG S  S+ +L+    LK +P    TPK++RP  S++S +SAV LT+
Sbjct: 7    TWVQTCSMFNQ--AGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPTSSFSS-ISAV-LTE 62

Query: 467  GGEKVKEGSNTQGEMTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMRYSLLAGGKR 646
              E V E  + + + TF+F SY++ K NSVNQALD AV ++EP+ IHEAMRYSLLAGGKR
Sbjct: 63   Q-EAVTE--DEEQKSTFNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKR 119

Query: 647  VRPILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGMPTNHKVFG 826
            VRP+LC++ACELVGG+ES+AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRG PTNHKVFG
Sbjct: 120  VRPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFG 179

Query: 827  ENVAVLAGDALLAFAFEHMANATVGAAPSRIIQAIGELAKDIGSEGLVAGQVVDIQSAGV 1006
            E+VAVLAGDALLA+AFEH+A +TVG   +RII+AIGELAK IGSEGLVAGQVVDI S G+
Sbjct: 180  EDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGL 239

Query: 1007 SDVGLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLLFQVVDDILD 1186
            ++VGLE LE+IH+HKTAALLE SVV+GAILGGG+++QV +LR FARCIGLLFQ VDDILD
Sbjct: 240  ANVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILD 299

Query: 1187 VTKSSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFDPEKXXXXXX 1366
            VTKSS+ELGKTAGKDLVADKATYP+L+G+EK+REFAEKL ++A + L  FDP+K      
Sbjct: 300  VTKSSQELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIA 359

Query: 1367 XXEYIAHRQN 1396
               YIA+RQN
Sbjct: 360  LANYIAYRQN 369