BLASTX nr result

ID: Coptis21_contig00007366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007366
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP21425.1| putative translation elongation factor P [Oryza s...   300   4e-79
gb|ACG41065.1| elongation factor P [Zea mays]                         298   9e-79
ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|...   298   9e-79
ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [S...   295   1e-77
ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachyp...   293   3e-77

>gb|AAP21425.1| putative translation elongation factor P [Oryza sativa Japonica
           Group]
          Length = 247

 Score =  300 bits (767), Expect = 4e-79
 Identities = 141/218 (64%), Positives = 180/218 (82%)
 Frame = +3

Query: 21  HRKRVKLRMHALRRRLPHLFTTTPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQH 200
           H   V      LR +        PW AIQ RGAK+LG++V++G VI+R+GRI+QVIK QH
Sbjct: 30  HAHAVATLAAVLRDQTAGSLAAAPWAAIQRRGAKMLGSEVKLGNVIQRRGRIYQVIKAQH 89

Query: 201 TKQGRGGATIQVELRDVDSGNKVTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNT 380
           + QGRGGATIQVELRDVD+GNK+TERFRTDEALE+VFVE K+FT+LY EGD V +M+P T
Sbjct: 90  SHQGRGGATIQVELRDVDTGNKITERFRTDEALERVFVEEKSFTYLYQEGDNVTLMEPET 149

Query: 381 FDQLEISKDLFGKAAAYLHEDMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAP 560
           F+QLE+SK+LFGK AAYL ++MKV++Q++DG+PMSASVP RVTCTV EA+ H KG+TA P
Sbjct: 150 FEQLEVSKELFGKTAAYLKDEMKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQP 209

Query: 561 QYKKVLLENGLTVMAPPFIEAGDQIVINTLEDTYMERA 674
           QYK+VLL+NGLTV+ PPF+EAG++IV++T +D+YM RA
Sbjct: 210 QYKRVLLDNGLTVLVPPFVEAGEKIVVSTADDSYMTRA 247


>gb|ACG41065.1| elongation factor P [Zea mays]
          Length = 246

 Score =  298 bits (764), Expect = 9e-79
 Identities = 140/197 (71%), Positives = 175/197 (88%)
 Frame = +3

Query: 84  TTPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDSGN 263
           T PW A Q RGAK+LG+DV++G VI+R+G I+QVIK QH+ QGRGGATIQVELRDVD+GN
Sbjct: 50  TAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDVDTGN 109

Query: 264 KVTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGKAAAYLHED 443
           K+TERFRTDEALE+VFVE K+FT+LY EGDTV +M+P TF+QLE+SK+LFGKAAAYL ++
Sbjct: 110 KITERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLKDE 169

Query: 444 MKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFIEA 623
           MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFIEA
Sbjct: 170 MKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFIEA 229

Query: 624 GDQIVINTLEDTYMERA 674
           G+ IVI+T +D+YM RA
Sbjct: 230 GENIVISTADDSYMTRA 246


>ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|gb|ACG34106.1|
           elongation factor P [Zea mays]
          Length = 246

 Score =  298 bits (764), Expect = 9e-79
 Identities = 140/197 (71%), Positives = 175/197 (88%)
 Frame = +3

Query: 84  TTPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDSGN 263
           T PW A Q RGAK+LG+DV++G VI+R+G I+QVIK QH+ QGRGGATIQVELRDVD+GN
Sbjct: 50  TAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDVDTGN 109

Query: 264 KVTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGKAAAYLHED 443
           K+TERFRTDEALE+VFVE K+FT+LY EGDTV +M+P TF+QLE+SK+LFGKAAAYL ++
Sbjct: 110 KITERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLKDE 169

Query: 444 MKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFIEA 623
           MKV++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFIEA
Sbjct: 170 MKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFIEA 229

Query: 624 GDQIVINTLEDTYMERA 674
           G+ IVI+T +D+YM RA
Sbjct: 230 GENIVISTADDSYMTRA 246


>ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [Sorghum bicolor]
           gi|241917550|gb|EER90694.1| hypothetical protein
           SORBIDRAFT_01g004430 [Sorghum bicolor]
          Length = 246

 Score =  295 bits (754), Expect = 1e-77
 Identities = 137/195 (70%), Positives = 175/195 (89%)
 Frame = +3

Query: 90  PWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDSGNKV 269
           PW A Q RG K+LG+DV++G +I+R+GRI+QVIK QH+ QGRGGATIQVELRDVD+GNK+
Sbjct: 52  PWAATQRRGVKMLGSDVKLGNIIQRRGRIYQVIKAQHSHQGRGGATIQVELRDVDTGNKL 111

Query: 270 TERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGKAAAYLHEDMK 449
           TERFRTDEALE+VFVE K+FT+LY EGDTV +M+P TF+QLE+SK+LFGKAAAYL ++MK
Sbjct: 112 TERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLKDEMK 171

Query: 450 VSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFIEAGD 629
           V++Q++DG+PMS +VP RVTCTV EA+ + KGLTA PQYK+VLL+NGL+V+APPFIEAG+
Sbjct: 172 VNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLSVLAPPFIEAGE 231

Query: 630 QIVINTLEDTYMERA 674
           +IVI+T +D+YM RA
Sbjct: 232 KIVISTADDSYMTRA 246


>ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachypodium distachyon]
          Length = 248

 Score =  293 bits (751), Expect = 3e-77
 Identities = 137/197 (69%), Positives = 173/197 (87%)
 Frame = +3

Query: 81  TTTPWFAIQNRGAKVLGTDVRVGTVIERKGRIFQVIKWQHTKQGRGGATIQVELRDVDSG 260
           + TPW A Q RGAK+LG+DV++G VI+RKG I+QVIK QH+ QGRGGATIQVELRDVD+G
Sbjct: 52  SATPWAATQRRGAKMLGSDVKLGNVIQRKGHIYQVIKAQHSHQGRGGATIQVELRDVDTG 111

Query: 261 NKVTERFRTDEALEKVFVEGKAFTFLYSEGDTVVIMDPNTFDQLEISKDLFGKAAAYLHE 440
           NK+ ERFRTDEALE+VFVE K+FT+LY EGD V +M+PNTF+Q+E+SKDLFGKAAAYL +
Sbjct: 112 NKIVERFRTDEALERVFVEEKSFTYLYQEGDNVALMEPNTFEQIEVSKDLFGKAAAYLKD 171

Query: 441 DMKVSVQFYDGKPMSASVPTRVTCTVAEAKSHMKGLTAAPQYKKVLLENGLTVMAPPFIE 620
           +M+V++Q+YDG+ +S SVP RVTCTV EA+ + KGLTA PQYK+VLL+NGLTV+APPFIE
Sbjct: 172 EMRVTLQYYDGRAVSGSVPPRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFIE 231

Query: 621 AGDQIVINTLEDTYMER 671
           AG+ IVI T++D+Y+ R
Sbjct: 232 AGESIVITTVDDSYVTR 248


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