BLASTX nr result

ID: Coptis21_contig00007356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007356
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|1...   132   4e-29
ref|XP_002268329.1| PREDICTED: cystinosin homolog [Vitis vinifer...   131   7e-29
ref|XP_004142770.1| PREDICTED: cystinosin homolog [Cucumis sativ...   129   2e-28
gb|AAM63025.1| unknown [Arabidopsis thaliana]                         129   2e-28
ref|NP_198883.1| cystinosin [Arabidopsis thaliana] gi|13124057|s...   129   2e-28

>ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|118485298|gb|ABK94508.1|
           unknown [Populus trichocarpa]
           gi|222867000|gb|EEF04131.1| predicted protein [Populus
           trichocarpa]
          Length = 274

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/94 (71%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3   GWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHYL 182
           G+SIGNILLD LGGVTNY QMA+QSIDQ SWVNFYGNIGKTLLSLVSIFFDL+F+ QHY+
Sbjct: 182 GFSIGNILLDCLGGVTNYAQMAVQSIDQNSWVNFYGNIGKTLLSLVSIFFDLVFMCQHYI 241

Query: 183 LYPSKKEKVSPEADEESTAPLIK-SSQPLQSENV 281
           LYP  K  V P+ ++E T PLI+ S +P   ENV
Sbjct: 242 LYPENK-AVPPKLNKEGTEPLIRFSEEPAAPENV 274


>ref|XP_002268329.1| PREDICTED: cystinosin homolog [Vitis vinifera]
           gi|296081321|emb|CBI17703.3| unnamed protein product
           [Vitis vinifera]
          Length = 274

 Score =  131 bits (329), Expect = 7e-29
 Identities = 65/93 (69%), Positives = 73/93 (78%)
 Frame = +3

Query: 3   GWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHYL 182
           G+SIGNIL DL GGV NY QM +QSI+QGSWVNFYGNIGK L+SLVS+FFDL+FI QHYL
Sbjct: 182 GFSIGNILFDLSGGVANYAQMTVQSINQGSWVNFYGNIGKLLISLVSVFFDLVFISQHYL 241

Query: 183 LYPSKKEKVSPEADEESTAPLIKSSQPLQSENV 281
           LYP KK    P+  +ES  PLIKS    QSENV
Sbjct: 242 LYPGKKVGKCPKLGDESREPLIKSVDHPQSENV 274


>ref|XP_004142770.1| PREDICTED: cystinosin homolog [Cucumis sativus]
           gi|449483821|ref|XP_004156702.1| PREDICTED: cystinosin
           homolog [Cucumis sativus]
          Length = 274

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/93 (67%), Positives = 76/93 (81%)
 Frame = +3

Query: 3   GWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHYL 182
           G+SIGNILLD LGG+ NY QMA+QSIDQ SWVNFYGNIGKTLLSL+SIFFDLLF++QHY+
Sbjct: 182 GFSIGNILLDFLGGLANYAQMAVQSIDQNSWVNFYGNIGKTLLSLISIFFDLLFMLQHYV 241

Query: 183 LYPSKKEKVSPEADEESTAPLIKSSQPLQSENV 281
           LYP K+  VS +AD+++   LI      QSE+V
Sbjct: 242 LYPGKRPIVSQKADDKTREALIAPPDRPQSEDV 274


>gb|AAM63025.1| unknown [Arabidopsis thaliana]
          Length = 270

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/85 (71%), Positives = 68/85 (80%)
 Frame = +3

Query: 3   GWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHYL 182
           GWSIGNILLD  GG+ NY QM +QSIDQ SW NFYGN+GKTLLSL+SIFFD+LF+ QHY+
Sbjct: 182 GWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMCQHYV 241

Query: 183 LYPSKKEKVSPEADEESTAPLIKSS 257
           LYP KK   SPE  EES  PLI SS
Sbjct: 242 LYPEKKVSKSPETSEESNEPLIDSS 266


>ref|NP_198883.1| cystinosin [Arabidopsis thaliana]
           gi|13124057|sp|P57758.1|CTNS_ARATH RecName:
           Full=Cystinosin homolog gi|9758095|dbj|BAB08539.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|15529266|gb|AAK97727.1| AT5g40670/MNF13_190
           [Arabidopsis thaliana] gi|16974419|gb|AAL31135.1|
           AT5g40670/MNF13_190 [Arabidopsis thaliana]
           gi|332007197|gb|AED94580.1| cystinosin [Arabidopsis
           thaliana]
          Length = 270

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/85 (71%), Positives = 68/85 (80%)
 Frame = +3

Query: 3   GWSIGNILLDLLGGVTNYGQMAMQSIDQGSWVNFYGNIGKTLLSLVSIFFDLLFIVQHYL 182
           GWSIGNILLD  GG+ NY QM +QSIDQ SW NFYGN+GKTLLSL+SIFFD+LF+ QHY+
Sbjct: 182 GWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYV 241

Query: 183 LYPSKKEKVSPEADEESTAPLIKSS 257
           LYP KK   SPE  EES  PLI SS
Sbjct: 242 LYPEKKVSKSPETGEESNEPLIDSS 266


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