BLASTX nr result

ID: Coptis21_contig00007353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007353
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529943.1| conserved hypothetical protein [Ricinus comm...    97   7e-21
ref|XP_004145744.1| PREDICTED: serine/threonine-protein phosphat...    96   1e-20
ref|XP_002285194.1| PREDICTED: serine/threonine-protein phosphat...    92   1e-19
gb|ABK95109.1| unknown [Populus trichocarpa]                           97   3e-18
ref|XP_003597254.1| Serine/threonine protein phosphatase 6 regul...    87   9e-18

>ref|XP_002529943.1| conserved hypothetical protein [Ricinus communis]
            gi|223530573|gb|EEF32451.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 845

 Score = 97.4 bits (241), Expect(2) = 7e-21
 Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3    GSDSGAFGENGKPDVDLSGPADPIGSTSASLSNGNVKEPNDTSSSMDSENGSVGTHTSCR 182
            GS +  F ++   DV+LS  A+       S ++G    PN +S + +S +GS+    S +
Sbjct: 705  GSSANPFEDHDSSDVNLSSQAEVATPDVNSPASGESILPNGSSPTKNSSDGSMSNDASHK 764

Query: 183  AA-VPSLFEEDVEFVGVEPEGTEKAMEQALKEGTVGEAGARKRSFTPK 323
            +A VPSLFEEDVEFVGVE EGTEKAMEQALKEG VGEAG  KR+  PK
Sbjct: 765  SATVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMIPK 812



 Score = 28.5 bits (62), Expect(2) = 7e-21
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 434 GEGMLEFNDTNYWR 475
           G G+ EFND NYWR
Sbjct: 823 GAGIKEFNDANYWR 836


>ref|XP_004145744.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit
            3-like [Cucumis sativus] gi|449524432|ref|XP_004169227.1|
            PREDICTED: serine/threonine-protein phosphatase 6
            regulatory subunit 3-like [Cucumis sativus]
          Length = 851

 Score = 96.3 bits (238), Expect(2) = 1e-20
 Identities = 55/108 (50%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3    GSDSGAFGENGKPDVDLSGPADPIGSTSASLSNGNVKEPNDTSSSMDSENGSVGT-HTSC 179
            GS    F ++ K D++ S   +       S + G    PN + ++  S +GS G+ H+  
Sbjct: 711  GSSMNPFEDSDKSDINDSSQVELAAPNVNSPTRGEAFLPNGSPTTTGSSDGSEGSDHSQK 770

Query: 180  RAAVPSLFEEDVEFVGVEPEGTEKAMEQALKEGTVGEAGARKRSFTPK 323
              AVPSLFEEDVEFVGVE EGTEKAMEQALKEG VGEAG  KRS  PK
Sbjct: 771  TTAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRSVVPK 818



 Score = 28.9 bits (63), Expect(2) = 1e-20
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 431 DGEGMLEFNDTNYWR 475
           +G G+ EFND NYWR
Sbjct: 828 NGAGIKEFNDANYWR 842


>ref|XP_002285194.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit
            3-like [Vitis vinifera]
          Length = 850

 Score = 91.7 bits (226), Expect(2) = 1e-19
 Identities = 57/100 (57%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
 Frame = +3

Query: 27   ENGKPDVDLSGPADPIGSTSASLSNGNVKEPNDTSSSMDSENGSVGTHTSCRAA-VPSLF 203
            ENG  DV    PA+       S S+G +  PN + ++  SE GS G+ +S R A VPSLF
Sbjct: 719  ENGDTDVTHPIPAEEAVLNVNSSSHGELVLPNGSPTATGSE-GSAGSGSSQRGATVPSLF 777

Query: 204  EEDVEFVGVEPEGTEKAMEQALKEGTVGEAGARKRSFTPK 323
            EEDVEFVGVE EGTEKAMEQALKEG VGEAG  KR+   K
Sbjct: 778  EEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNIIAK 817



 Score = 30.0 bits (66), Expect(2) = 1e-19
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 434 GEGMLEFNDTNYWR 475
           G GM EFND NYWR
Sbjct: 828 GAGMKEFNDANYWR 841


>gb|ABK95109.1| unknown [Populus trichocarpa]
          Length = 840

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3    GSDSGAFGENGKPDVDLSGPADPIGSTSASLSNGNVKEPNDTSSSMDSENGSVGTHTSCR 182
            GS    F ++   D  LS  A  +   ++S S+G    PN  S S DS + SV + +S +
Sbjct: 706  GSTVNPFEDHDNSDDSLSSQAKTVTPGASSPSSGESILPNGLSPSKDSSDASVSSDSSKK 765

Query: 183  A-AVPSLFEEDVEFVGVEPEGTEKAMEQALKEGTVGEAGARKRSFTPK 323
            +  +PSLFEEDVEFVGVE EGTEKAMEQALKEG VGEAG  KR+ +PK
Sbjct: 766  SPTMPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNISPK 813


>ref|XP_003597254.1| Serine/threonine protein phosphatase 6 regulatory subunit [Medicago
            truncatula] gi|355486302|gb|AES67505.1| Serine/threonine
            protein phosphatase 6 regulatory subunit [Medicago
            truncatula]
          Length = 874

 Score = 87.4 bits (215), Expect(2) = 9e-18
 Identities = 51/84 (60%), Positives = 58/84 (69%)
 Frame = +3

Query: 72   IGSTSASLSNGNVKEPNDTSSSMDSENGSVGTHTSCRAAVPSLFEEDVEFVGVEPEGTEK 251
            IGS ++S         N + +S D  +G VG  T   AAVPSLFEEDVEFVGVE EGTEK
Sbjct: 759  IGSPNSSSPKAESVLSNGSPTSKDLIDG-VGDSTQRSAAVPSLFEEDVEFVGVELEGTEK 817

Query: 252  AMEQALKEGTVGEAGARKRSFTPK 323
            AMEQALKEG VGEAG  KR+ +PK
Sbjct: 818  AMEQALKEGIVGEAGPLKRNVSPK 841



 Score = 28.1 bits (61), Expect(2) = 9e-18
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +2

Query: 440 GMLEFNDTNYWR 475
           GM EFND NYWR
Sbjct: 854 GMKEFNDANYWR 865


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