BLASTX nr result

ID: Coptis21_contig00007304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007304
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325938.1| predicted protein [Populus trichocarpa] gi|2...   124   4e-26
ref|XP_002525504.1| conserved hypothetical protein [Ricinus comm...   121   4e-25
ref|XP_002327305.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-25
emb|CBI31246.3| unnamed protein product [Vitis vinifera]              117   4e-24
ref|XP_002274203.1| PREDICTED: uncharacterized protein LOC100241...   117   4e-24

>ref|XP_002325938.1| predicted protein [Populus trichocarpa] gi|222862813|gb|EEF00320.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  124 bits (312), Expect = 4e-26
 Identities = 56/96 (58%), Positives = 76/96 (79%)
 Frame = +1

Query: 661 PFEILKFCLFKVSPGWTISIAAAVMGIVIXXXXXXXXXXXXQSIALKLTVDDKKVSQLMN 840
           PFE+L++C+F+++P W++S+AAAVMG VI            +S+ LK+TVDDKKVSQ M 
Sbjct: 207 PFEVLRYCVFRLNPVWSVSMAAAVMGFVILGRRLYKMRRKTKSLQLKVTVDDKKVSQFMT 266

Query: 841 RSTRLNEAFSVVRNVPMIRPLLPAPGLTPWPILNLR 948
           R+TRLNEAFSVVR VP++RPLLPA G+ PWP+++LR
Sbjct: 267 RATRLNEAFSVVRRVPIVRPLLPAAGVNPWPVMSLR 302


>ref|XP_002525504.1| conserved hypothetical protein [Ricinus communis]
           gi|223535183|gb|EEF36862.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score =  121 bits (303), Expect = 4e-25
 Identities = 56/96 (58%), Positives = 73/96 (76%)
 Frame = +1

Query: 661 PFEILKFCLFKVSPGWTISIAAAVMGIVIXXXXXXXXXXXXQSIALKLTVDDKKVSQLMN 840
           PFE+L++C+F++SP WT S+AAAVMG VI            +S+ LK+TVDDKKVSQ M+
Sbjct: 230 PFELLRYCVFRISPVWTFSMAAAVMGFVILGRRLYKMKRKTRSLPLKVTVDDKKVSQFMS 289

Query: 841 RSTRLNEAFSVVRNVPMIRPLLPAPGLTPWPILNLR 948
           R+ RLNEAFSVVR VP++RPLLPA G+  WP++ LR
Sbjct: 290 RAARLNEAFSVVRRVPIVRPLLPAGGVNSWPVMTLR 325



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
 Frame = +3

Query: 81  MEEEAPRDFQDWELLHNKETGLLLPPDS------LVDIEGVSEGVIRSDYFAFDSENRYG 242
           ME E   +FQDWELL N +T ++  P+S      L +IE  SEGV+R DYF+ ++++RY 
Sbjct: 1   MEGEVSGEFQDWELLVNSDTDMVHSPNSVNNSRNLEEIEADSEGVLRLDYFSLENDSRYA 60

Query: 243 KTIXXXXXXXXXXXXXXXNPSWIEPCSESTMFIDGDDQRVELRRKNSTEFW 395
           KT                NPSWI+P         G + R   +  NS EFW
Sbjct: 61  KT-AAVVDASDEGSVESDNPSWIDP---------GPETRYN-QITNSGEFW 100


>ref|XP_002327305.1| predicted protein [Populus trichocarpa] gi|222835675|gb|EEE74110.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  120 bits (300), Expect = 9e-25
 Identities = 54/96 (56%), Positives = 73/96 (76%)
 Frame = +1

Query: 661 PFEILKFCLFKVSPGWTISIAAAVMGIVIXXXXXXXXXXXXQSIALKLTVDDKKVSQLMN 840
           PFE+L++C+F+ SP W++S+AAAVMG VI            +S+ LK+TVDDKKVS  M+
Sbjct: 195 PFEMLRYCVFRFSPVWSVSVAAAVMGFVILGRRLYKMKRKTKSLQLKVTVDDKKVSHFMS 254

Query: 841 RSTRLNEAFSVVRNVPMIRPLLPAPGLTPWPILNLR 948
           R+ RLNE FSVVR VP++RPLLPA G+ PWP+++LR
Sbjct: 255 RAARLNETFSVVRRVPIVRPLLPAAGVNPWPVMSLR 290



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
 Frame = +3

Query: 93  APRDFQDWELLHNKETGLLLPPDSLVD-------IEGVSEGVIRSDYFAFDSENRYGKTI 251
           A  DFQDWELL N ++ L+  P S+ D       I   +EG+ R DYF+ +++NRY KT 
Sbjct: 7   AVTDFQDWELLANSDSDLVNSPISVADSSRSFEEIVADTEGMFRLDYFSLENDNRYVKT- 65

Query: 252 XXXXXXXXXXXXXXXNPSWIEPCSESTMFIDGDDQRVELRRKNSTEFW 395
                          NPSWI+P SE+             +R+NS EFW
Sbjct: 66  --TLDATDEGSVESDNPSWIDPGSET-----------RFQRRNSVEFW 100


>emb|CBI31246.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score =  117 bits (294), Expect = 4e-24
 Identities = 54/96 (56%), Positives = 71/96 (73%)
 Frame = +1

Query: 661 PFEILKFCLFKVSPGWTISIAAAVMGIVIXXXXXXXXXXXXQSIALKLTVDDKKVSQLMN 840
           P E  ++C F+VSP W+ S+AAA++GIVI            +S+ LK+TVDDKKVSQ M+
Sbjct: 37  PLEFFRYCAFRVSPVWSFSVAAAILGIVILGRRLYRMKRKSRSLQLKVTVDDKKVSQFMS 96

Query: 841 RSTRLNEAFSVVRNVPMIRPLLPAPGLTPWPILNLR 948
           R+ RLNEAFSVVR VP+IRP LPA G+ PWP+++LR
Sbjct: 97  RAARLNEAFSVVRRVPIIRPALPAAGVNPWPVMSLR 132


>ref|XP_002274203.1| PREDICTED: uncharacterized protein LOC100241424 [Vitis vinifera]
          Length = 415

 Score =  117 bits (294), Expect = 4e-24
 Identities = 54/96 (56%), Positives = 71/96 (73%)
 Frame = +1

Query: 661 PFEILKFCLFKVSPGWTISIAAAVMGIVIXXXXXXXXXXXXQSIALKLTVDDKKVSQLMN 840
           P E  ++C F+VSP W+ S+AAA++GIVI            +S+ LK+TVDDKKVSQ M+
Sbjct: 320 PLEFFRYCAFRVSPVWSFSVAAAILGIVILGRRLYRMKRKSRSLQLKVTVDDKKVSQFMS 379

Query: 841 RSTRLNEAFSVVRNVPMIRPLLPAPGLTPWPILNLR 948
           R+ RLNEAFSVVR VP+IRP LPA G+ PWP+++LR
Sbjct: 380 RAARLNEAFSVVRRVPIIRPALPAAGVNPWPVMSLR 415



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
 Frame = +3

Query: 81  MEEEAPRDFQDWELLHNKETGLLLPPDS------LVDIEGVSEGVIRSDYFAFDSENRYG 242
           MEE    D QDWELLH  ++ L++ P S      L  IEG SEG+IRSDYF+ DS+ RY 
Sbjct: 1   MEESV--DLQDWELLHGSDSELVISPVSAQKLSELEGIEGDSEGMIRSDYFSLDSQGRYE 58

Query: 243 KTIXXXXXXXXXXXXXXXNPSWIEPCSESTMFIDGDDQRVELRRKNSTEFW 395
           + +               NPSWI+P         G + R E  RK+  EFW
Sbjct: 59  RPV----DVSEEGSIESDNPSWIDP---------GLETRYE--RKDMGEFW 94


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