BLASTX nr result

ID: Coptis21_contig00007285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007285
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237024.1| uncharacterized protein LOC100306067 precurs...    61   8e-08
ref|NP_563872.1| uncharacterized protein [Arabidopsis thaliana] ...    61   1e-07
ref|XP_002268027.1| PREDICTED: uncharacterized protein LOC100260...    60   1e-07
ref|XP_004135224.1| PREDICTED: uncharacterized protein LOC101210...    60   2e-07
ref|XP_002889815.1| hypothetical protein ARALYDRAFT_471166 [Arab...    59   4e-07

>ref|NP_001237024.1| uncharacterized protein LOC100306067 precursor [Glycine max]
           gi|255627431|gb|ACU14060.1| unknown [Glycine max]
          Length = 173

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +3

Query: 243 FSTSLRKSKHQLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEKLPKKEI 389
           FST    S  +L    AEY+FPDPIP+FA+AET KFK+HLL+KL KK++
Sbjct: 45  FSTLPFSSTKRLVTRAAEYKFPDPIPEFADAETQKFKSHLLKKLSKKDM 93


>ref|NP_563872.1| uncharacterized protein [Arabidopsis thaliana]
           gi|145323826|ref|NP_001077502.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|5091545|gb|AAD39574.1|AC007067_14 T10O24.14
           [Arabidopsis thaliana] gi|21554792|gb|AAM63692.1|
           unknown [Arabidopsis thaliana]
           gi|149944329|gb|ABR46207.1| At1g10522 [Arabidopsis
           thaliana] gi|332190468|gb|AEE28589.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332190469|gb|AEE28590.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 179

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = +3

Query: 243 FSTSLRKSKHQLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEKLPKKEI 389
           FS S    +  +CRA AEY+FPDPIP+FAEAET+KF++H+L KL K+++
Sbjct: 56  FSLSSLSRRGFVCRA-AEYKFPDPIPEFAEAETEKFRDHMLNKLSKRDL 103


>ref|XP_002268027.1| PREDICTED: uncharacterized protein LOC100260319 [Vitis vinifera]
           gi|296086507|emb|CBI32096.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/66 (51%), Positives = 45/66 (68%)
 Frame = +3

Query: 192 SCFLRRKQPLLLSPCLLFSTSLRKSKHQLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEK 371
           S    + QP L S  L+FS+S     + +CRA AEY+FPDPIP+FA+ ET+KF+ HLL K
Sbjct: 55  SSLTTKLQPQLHS--LVFSSS--SFANHICRA-AEYKFPDPIPEFAQVETEKFRTHLLNK 109

Query: 372 LPKKEI 389
             KK+I
Sbjct: 110 FSKKDI 115


>ref|XP_004135224.1| PREDICTED: uncharacterized protein LOC101210245 [Cucumis sativus]
           gi|449527396|ref|XP_004170697.1| PREDICTED:
           uncharacterized LOC101210245 [Cucumis sativus]
          Length = 169

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/58 (55%), Positives = 42/58 (72%)
 Frame = +3

Query: 216 PLLLSPCLLFSTSLRKSKHQLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEKLPKKEI 389
           PL LSP L   +S   +   +C A AEY+FPDPIP+FA AET+KF+ HLL+KL K++I
Sbjct: 37  PLRLSPTLTLPSSSFPT--HICTA-AEYKFPDPIPEFAVAETEKFRAHLLQKLSKRDI 91


>ref|XP_002889815.1| hypothetical protein ARALYDRAFT_471166 [Arabidopsis lyrata subsp.
           lyrata] gi|297335657|gb|EFH66074.1| hypothetical protein
           ARALYDRAFT_471166 [Arabidopsis lyrata subsp. lyrata]
          Length = 180

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/49 (55%), Positives = 39/49 (79%)
 Frame = +3

Query: 243 FSTSLRKSKHQLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEKLPKKEI 389
           FS S    +  +CRA AEY+FPDPIP+FAEAET+KF++H+ +KL K+++
Sbjct: 58  FSLSSLSRRGFVCRA-AEYKFPDPIPEFAEAETEKFRDHMSKKLSKRDL 105


Top