BLASTX nr result

ID: Coptis21_contig00007273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007273
         (1823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBS...   503   e-140
ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132
ref|XP_002512622.1| conserved hypothetical protein [Ricinus comm...   474   e-131
ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBS...   473   e-131
ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBS...   468   e-129

>ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera]
            gi|297735292|emb|CBI17654.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  503 bits (1294), Expect = e-140
 Identities = 267/420 (63%), Positives = 307/420 (73%), Gaps = 9/420 (2%)
 Frame = +1

Query: 274  MATVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 453
            MA+VFLYHVVGDLTVGKPELVEF E E++ESAIR IGE  EG IP+WKR+ H GV+    
Sbjct: 1    MASVFLYHVVGDLTVGKPELVEFPETETVESAIRVIGESAEGSIPIWKRRSHVGVM---- 56

Query: 454  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSVLKEVDPGTR 633
             E SE R QRF+GI+NSLD+V +L+++ CL DQEKAMKTPVSEVVVPN S+L+EVDP TR
Sbjct: 57   -EKSEMRQQRFVGILNSLDIVAFLARDACLVDQEKAMKTPVSEVVVPNNSLLREVDPATR 115

Query: 634  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINTXXXXXXXXXXXTRP-- 807
            LIDALE+MK G++RLLVPKSV W+GMSKRFSI+YNGKWLKN++             RP  
Sbjct: 116  LIDALEMMKHGLKRLLVPKSVVWKGMSKRFSILYNGKWLKNLDASSSSTNLAPNANRPSS 175

Query: 808  ---PSFRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 978
               PS R NKFCCLSREDVIRF                     ++P+Y+ IEAS PA++V
Sbjct: 176  SSTPSSR-NKFCCLSREDVIRFVIGCLGALAPLPLSSISSLGAISPNYYSIEASFPAIQV 234

Query: 979  NHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVMGVEEH 1158
                P DP AVAV+EST DG  KIIGEISA KLWKCDY            GQFVMGVE++
Sbjct: 235  TQKLPQDPSAVAVVESTPDGQYKIIGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDN 294

Query: 1159 TSPGSLPDFSINSL--EDNAGVGGA--RLRKFSSRSIGFFSSLTSPTIGMGRSMYRGSSA 1326
             +  SLP FS+N    E+N   GGA  R RKFSSRSIGFFS+  SP+ G  RSMYRG SA
Sbjct: 295  VTSRSLPHFSVNLTGGENNMANGGASTRQRKFSSRSIGFFSNPASPSFGASRSMYRGRSA 354

Query: 1327 PLTCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYADILAAVTRHPATLIPAT 1506
            PLTCKVTSSLAAVMAQMLSHRATHVWVTEAE E+ LVGVVGYADILAAV + PA +IP+T
Sbjct: 355  PLTCKVTSSLAAVMAQMLSHRATHVWVTEAESEDILVGVVGYADILAAVIKQPAPVIPST 414


>ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|222862340|gb|EEE99846.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  478 bits (1230), Expect = e-132
 Identities = 251/417 (60%), Positives = 301/417 (72%), Gaps = 10/417 (2%)
 Frame = +1

Query: 274  MATVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 453
            M +VFLYHVVGDLTVGKPE+VEFYE E++ESAIRAIGE TE GIPVWKRK H G++    
Sbjct: 1    MPSVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWKRKSHVGMI---- 56

Query: 454  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSVLKEVDPGTR 633
             ENSE R+QRF+GI+NSLD+V +L+  ECL+D++KA+KTPVS+VVVPN S+LK+VDP TR
Sbjct: 57   -ENSETRLQRFVGILNSLDIVAFLASTECLEDRDKAIKTPVSQVVVPNTSLLKQVDPATR 115

Query: 634  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT--XXXXXXXXXXXTRP 807
            LIDALE+MKQGVRRL+VPKS+ W+GMSKRFSI+YNGKWLKN +T              RP
Sbjct: 116  LIDALEMMKQGVRRLIVPKSMGWKGMSKRFSILYNGKWLKNADTSNSSSNNNLTINPNRP 175

Query: 808  PS----FRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 975
             S       +KFCCLSREDVIRF                     +N +Y+ +EAS PA+E
Sbjct: 176  SSSSGTSNRDKFCCLSREDVIRFLIGCLGALAPLPLSSISSLGAINTNYNSLEASLPAIE 235

Query: 976  VNHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVMGVEE 1155
                 P DP A+AV+E   +G  KIIGEISAS+LWKCDY            GQFVMGVE+
Sbjct: 236  ATRKLPEDPSAIAVVEPIPNGQCKIIGEISASRLWKCDYLAAAWALANLSAGQFVMGVED 295

Query: 1156 HTSPGSLPDFSINSLEDN----AGVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGSS 1323
            + +  SLPDF++NS  D+     G G  RLRKFSSRSIGF       +IG+GRS+YRG S
Sbjct: 296  NVTSRSLPDFAVNSAADDDNTAHGAGSTRLRKFSSRSIGF---NPGNSIGIGRSVYRGRS 352

Query: 1324 APLTCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYADILAAVTRHPATL 1494
            APLTCK+TSSLAAVMAQMLSHRATHVWV E   ++ LVGVVGYADILAAVT+ PA++
Sbjct: 353  APLTCKITSSLAAVMAQMLSHRATHVWVIEDHSDDILVGVVGYADILAAVTKQPASV 409


>ref|XP_002512622.1| conserved hypothetical protein [Ricinus communis]
            gi|223548583|gb|EEF50074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 432

 Score =  474 bits (1221), Expect = e-131
 Identities = 258/436 (59%), Positives = 307/436 (70%), Gaps = 16/436 (3%)
 Frame = +1

Query: 274  MATVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 453
            MA+VFLYHVVGDLTVGKPE+VEF E E++ESAIRAIGE TE GIPVWKR+ H     VN 
Sbjct: 1    MASVFLYHVVGDLTVGKPEMVEFCETETVESAIRAIGESTECGIPVWKRRSH-----VNM 55

Query: 454  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSVLKEVDPGTR 633
             EN+E R QRF+GI+NSLD+V +L+K +CL+DQEKAMKTPVSEVVVP+ S+LK+VDP TR
Sbjct: 56   IENNEMRQQRFVGILNSLDIVAFLAKAQCLEDQEKAMKTPVSEVVVPDNSLLKQVDPATR 115

Query: 634  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT--------XXXXXXXX 789
            LIDALE+MKQGV+RLLV K   W+GMSKRFSI+YNGKWLKN+++                
Sbjct: 116  LIDALEMMKQGVKRLLVSKGTVWKGMSKRFSILYNGKWLKNVDSSNSSNNLMGNSSNNLM 175

Query: 790  XXXTRPPS----FRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEA 957
               +RP S       +KFCCLSREDVIRF                     +N +Y+ +EA
Sbjct: 176  SNISRPSSSSTTISRDKFCCLSREDVIRFIIGCLGALAPLPLSSISSLGAINFNYYSVEA 235

Query: 958  SSPALEVNHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQF 1137
            S  A+E     P DP AVAV+E   DG SKIIGEISAS+LWKCDY            GQF
Sbjct: 236  SLSAIEATQKLPKDPCAVAVVEPMPDGHSKIIGEISASRLWKCDYLAAAWALANLSSGQF 295

Query: 1138 VMGVEEHTSPGSLPDFSINS-LEDN---AGVGGARLRKFSSRSIGFFSSLTSPTIGMGRS 1305
            VMGVE++ +  SLPDF++NS + DN    G G  R +KFSS+SIGF  +  S + G+GRS
Sbjct: 296  VMGVEDNLTARSLPDFTVNSTVSDNNTANGGGSTRPKKFSSKSIGF--NPGSSSFGIGRS 353

Query: 1306 MYRGSSAPLTCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYADILAAVTRHP 1485
            MYRG SAPLTCK+TSSLAAVMAQMLSHRATHVWVTEA+++E LVGVVGYADIL AVT+ P
Sbjct: 354  MYRGRSAPLTCKITSSLAAVMAQMLSHRATHVWVTEADNDEVLVGVVGYADILFAVTKPP 413

Query: 1486 ATLIPATP*CERLETE 1533
            A+ IP     E   TE
Sbjct: 414  ASFIPINRSTEGFPTE 429


>ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score =  473 bits (1217), Expect = e-131
 Identities = 250/419 (59%), Positives = 303/419 (72%), Gaps = 9/419 (2%)
 Frame = +1

Query: 274  MATVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 453
            MA+VF+YHVVGDLTVGKPEL EF+E+E++ESAIRAIGEC EG IP+WK++   G+     
Sbjct: 1    MASVFVYHVVGDLTVGKPELAEFHESETVESAIRAIGECHEGTIPIWKKRSQLGI----- 55

Query: 454  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSVLKEVDPGTR 633
             ENS+ R QRF+GI++S D+V +L+K +CL+DQ+KA+KTPVSEVVV N S+L+ VDP TR
Sbjct: 56   -ENSDMRQQRFVGILSSFDIVAFLAKSQCLEDQDKALKTPVSEVVVHNNSLLRVVDPATR 114

Query: 634  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT-XXXXXXXXXXXTRPP 810
            LIDAL++MKQGV+RLLVPKSVAW+GMSKRFS+IY GKWLKN  +             R P
Sbjct: 115  LIDALDMMKQGVKRLLVPKSVAWKGMSKRFSVIYYGKWLKNSESPGNSSNNLPLNMNRSP 174

Query: 811  SFR----ENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 978
            S       +++CCLSREDV+RF                     +N +Y+YIE+S+PA+E 
Sbjct: 175  STSITPIRDRYCCLSREDVLRFIIGCLGALAPLPLTSIASLGAINSNYNYIESSTPAIEA 234

Query: 979  NHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVMGVEEH 1158
                P DP AVAVIESTSDG  KIIGEISA KLWKCDY            GQFVMGVE++
Sbjct: 235  TQKLPQDPSAVAVIESTSDGQCKIIGEISACKLWKCDYLSAAWALANLSAGQFVMGVEDN 294

Query: 1159 TSPGSLPDFSI---NSLEDNAGVGGARL-RKFSSRSIGFFSSLTSPTIGMGRSMYRGSSA 1326
             +P SLP FS+   +   D A  GG+R  RKFSSRS+GFFS+  S + G  RSMYRG SA
Sbjct: 295  VTPRSLPQFSLDLASGENDLANGGGSRKPRKFSSRSVGFFSNTASHSFG-SRSMYRGRSA 353

Query: 1327 PLTCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYADILAAVTRHPATLIPA 1503
            PLTCK+TSSLAAV+AQMLSHRATHVWVTE E++E LVGVVGYADILAAVT+ P   IPA
Sbjct: 354  PLTCKITSSLAAVLAQMLSHRATHVWVTEDENDEVLVGVVGYADILAAVTKPPTAFIPA 412


>ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score =  468 bits (1204), Expect = e-129
 Identities = 248/419 (59%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
 Frame = +1

Query: 274  MATVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 453
            MA+VF+YHVVGDLTVGKPEL EF+E+E++ESAIRAIGE  EG IP+WK++   G+     
Sbjct: 1    MASVFVYHVVGDLTVGKPELAEFHESETVESAIRAIGESPEGSIPIWKKRSQLGI----- 55

Query: 454  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSVLKEVDPGTR 633
             ENS+ R QRF+GI++S D+V +L+K  CL+DQ+KA+KTPVSEVVV N S+L+ VDP TR
Sbjct: 56   -ENSDMRQQRFVGILSSFDIVAFLAKSRCLEDQDKALKTPVSEVVVHNNSLLRVVDPATR 114

Query: 634  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT-XXXXXXXXXXXTRPP 810
            LIDAL++MKQGV+RLLVPKS+AW+GMSKRFS+IY GKWLKN  +             R P
Sbjct: 115  LIDALDMMKQGVKRLLVPKSIAWKGMSKRFSVIYYGKWLKNSESPGNSSNNLPLSMNRSP 174

Query: 811  SFR----ENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 978
            S       +K+CCLSREDV+RF                     +N +Y+YIE+S+PA+E 
Sbjct: 175  STSVTPIPDKYCCLSREDVLRFIIGCLGALAPLPLTSIAALEAINSNYNYIESSTPAIEA 234

Query: 979  NHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVMGVEEH 1158
                P DP AVAVIES SDG  KIIGEISA KLWKCDY            GQFVMGVE++
Sbjct: 235  TQKLPQDPSAVAVIESASDGQCKIIGEISACKLWKCDYLSAAWALANLSAGQFVMGVEDN 294

Query: 1159 TSPGSLPDFSINSLE---DNAGVGGARL-RKFSSRSIGFFSSLTSPTIGMGRSMYRGSSA 1326
             +P SLP+FS++S     D    GG+R  RKFSSRS+GFFS+  S      RSMYRG SA
Sbjct: 295  VTPRSLPEFSLDSPSGDIDLVNSGGSRKPRKFSSRSVGFFSNSASHNFS-SRSMYRGRSA 353

Query: 1327 PLTCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYADILAAVTRHPATLIPA 1503
            PLTCK+TSSLAAV+AQMLSHRATHVWVTE E++E LVGVVGYADILAAVT+ P T IPA
Sbjct: 354  PLTCKITSSLAAVLAQMLSHRATHVWVTEDENDEVLVGVVGYADILAAVTKPPTTFIPA 412


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