BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007264
         (1902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-l...   372   e-100
emb|CBI26906.3| unnamed protein product [Vitis vinifera]              358   2e-96
ref|XP_002526020.1| conserved hypothetical protein [Ricinus comm...   302   2e-79
ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|2...   257   9e-66
ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis th...   253   1e-64

>ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
          Length = 1036

 Score =  372 bits (956), Expect = e-100
 Identities = 211/432 (48%), Positives = 275/432 (63%), Gaps = 5/432 (1%)
 Frame = -2

Query: 1898 NAVGRNMRFSTFLQSKLLKLCSRSNKNCAHKLLEEVNDYGKASVSDRSKLLNKVSVLLGY 1719
            NA+GR MRFS FL SK+ KLCSRS      KLL+EV+ YGKAS+SDRSKLLNKVSVL+GY
Sbjct: 65   NALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDEVDSYGKASISDRSKLLNKVSVLMGY 124

Query: 1718 KSVQDLVENESGQKLSGANFKDILNELEVSLACERFSSIIMGSSSPILLFDELACKSEGR 1539
             S+ DL+ENE  QK S  N KD +N +++SLAC +F SII+G+S P+ L+DE  C S+ R
Sbjct: 125  DSLHDLIENERVQKESDMNLKDEINNVDISLACRKFPSIILGNSPPVELYDENKCHSDVR 184

Query: 1538 NHMIDQNCHICLPSSIGGEMFD-VERMTE--PSLDFPVAVDSSLLKELDSPVVEDL--CL 1374
            + +  Q C   L SS G E +D  +R +E  PSL                P + ++   L
Sbjct: 185  SLLAAQICEEFLSSS-GAEKWDGPDRFSETWPSL---------------CPTLPNINASL 228

Query: 1373 LEEKSSDVLPIALQSVPLQTERKPVSYDIAEKPTFTLPSESEQKIISIKLILDKPLSSIP 1194
            L ++SS  LP++ Q + ++T+ K       E P   +  ES+     ++LILDK +S IP
Sbjct: 229  LRKESSSTLPVSSQPLTMETKEKSDVLVTVEGPPANMVLESQNNAEPVELILDKSISFIP 288

Query: 1193 GISSKQCHQLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGNYMISFXXXXXXXXXXXX 1014
            G+  + C QLE C  HTLR+LL HFPRTYADL+NA   I DG YMIS             
Sbjct: 289  GLQKRHCRQLENCGFHTLRKLLQHFPRTYADLKNALIGIDDGQYMISIGKILSSRGVKAS 348

Query: 1013 XXXXFLEVVVACDIANDLAASECKNDQHATEAKKKIYLHLKKFFRGARFTNTYFLKSIQS 834
                FLEVVV C+IA+  +  E     + +  KK IYLHLKKFFRG RFTN  FL+ +Q 
Sbjct: 349  CSFSFLEVVVGCEIADCESKYEQMIGANDSWGKKTIYLHLKKFFRGTRFTNVPFLRCLQE 408

Query: 833  KHKEGDYVCVSGKVKAMSKEDHYEMREYNVDAIEDEKESSLHGERRPCPLYPSKGGVKPD 654
            KHKEGD VCVSGKV+ M  +DHYEMREYN+D IED+++SS+  + RP  +YPSKGG+  +
Sbjct: 409  KHKEGDIVCVSGKVRTMRTKDHYEMREYNLDLIEDDQDSSVCPKGRPYSIYPSKGGLNSN 468

Query: 653  FFRAMISRSVPS 618
            F R +ISR++ S
Sbjct: 469  FLRDIISRALHS 480


>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
          Length = 988

 Score =  358 bits (920), Expect = 2e-96
 Identities = 210/428 (49%), Positives = 266/428 (62%), Gaps = 1/428 (0%)
 Frame = -2

Query: 1898 NAVGRNMRFSTFLQSKLLKLCSRSNKNCAHKLLEEVNDYGKASVSDRSKLLNKVSVLLGY 1719
            NA+GR MRFS FL SK+ KLCSRS      KLL+EV+ YGKAS+SDRSKLLNKVSVL+GY
Sbjct: 34   NALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDEVDSYGKASISDRSKLLNKVSVLMGY 93

Query: 1718 KSVQDLVENESGQKLSGANFKDILNELEVSLACERFSSIIMGSSSPILLFDELACKSEGR 1539
             S+ DL+ENE  QK S  N KD +N +++SLAC +F SII+G+S P+ L+DE  C S+ R
Sbjct: 94   DSLHDLIENERVQKESDMNLKDEINNVDISLACRKFPSIILGNSPPVELYDENKCHSDVR 153

Query: 1538 NHMIDQNCHICLPSSIGGEMFD-VERMTEPSLDFPVAVDSSLLKELDSPVVEDLCLLEEK 1362
            + +  Q C   L SS G E +D  +R +E    +P     SL   L  P +    L +EK
Sbjct: 154  SLLAAQICEEFLSSS-GAEKWDGPDRFSE---TWP-----SLCPTL--PNINASLLRKEK 202

Query: 1361 SSDVLPIALQSVPLQTERKPVSYDIAEKPTFTLPSESEQKIISIKLILDKPLSSIPGISS 1182
             SDVL                     E P   +  ES+     ++LILDK +S IPG+  
Sbjct: 203  KSDVLV------------------TVEGPPANMVLESQNNAEPVELILDKSISFIPGLQK 244

Query: 1181 KQCHQLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGNYMISFXXXXXXXXXXXXXXXX 1002
            + C QLE C  HTLR+LL HFPRTYADL+NA   I DG YMIS                 
Sbjct: 245  RHCRQLENCGFHTLRKLLQHFPRTYADLKNALIGIDDGQYMISIGKILSSRGVKASCSFS 304

Query: 1001 FLEVVVACDIANDLAASECKNDQHATEAKKKIYLHLKKFFRGARFTNTYFLKSIQSKHKE 822
            FLEVVV C+IA+  +  E     + +  KK IYLHLKKFFRG RFTN  FL+ +Q KHKE
Sbjct: 305  FLEVVVGCEIADCESKYEQMIGANDSWGKKTIYLHLKKFFRGTRFTNVPFLRCLQEKHKE 364

Query: 821  GDYVCVSGKVKAMSKEDHYEMREYNVDAIEDEKESSLHGERRPCPLYPSKGGVKPDFFRA 642
            GD VCVSGKV+ M  +DHYEMREYN+D IED+++SS+  + RP  +YPSKGG+  +F R 
Sbjct: 365  GDIVCVSGKVRTMRTKDHYEMREYNLDLIEDDQDSSVCPKGRPYSIYPSKGGLNSNFLRD 424

Query: 641  MISRSVPS 618
            +ISR++ S
Sbjct: 425  IISRALHS 432


>ref|XP_002526020.1| conserved hypothetical protein [Ricinus communis]
            gi|223534667|gb|EEF36360.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 983

 Score =  302 bits (773), Expect = 2e-79
 Identities = 184/435 (42%), Positives = 252/435 (57%), Gaps = 16/435 (3%)
 Frame = -2

Query: 1880 MRFSTFLQSKLLKLCSRSNKNCAHKLLEEVNDYGKASVSDRSKLLNKVSVLLGYKSVQDL 1701
            MRF   L + + +L  R   N A KLL++   Y   SVSDRSKLLNKV+ L+ Y    DL
Sbjct: 1    MRFCHSLLN-ISRLHIRFKHNFAEKLLDQAYKYDMPSVSDRSKLLNKVTALVDYDGFHDL 59

Query: 1700 VENESGQKLSGANFKDILNELEVSLACERFSSIIMGSSSPILLFDELACKSEGRNHMIDQ 1521
            +EN    + SG + KD  ++ +VSLAC+RF SI +GSS P+ L+DE     E +  +  +
Sbjct: 60   IENGKAGEQSGQDLKDATDDFDVSLACKRFPSITLGSSPPVELYDETTKPLEMKTLLAAE 119

Query: 1520 NCHICLPSSIGGEMFDVERMTE--------PSLDFPVAV---DSSLLKELDSPVVEDLCL 1374
            +    +  ++G +  D +   E        PS ++ +     D S     +S   +   L
Sbjct: 120  SYKEFVSDALGMKWVDSDGFYEQWTSADAVPSENYSIPKAEKDESACMTTESREEKTYLL 179

Query: 1373 LEEKSSDVLPIALQSVPLQTERKPVSYDIAEKPTFTLPSESEQKIISIKL---ILDKPLS 1203
             E K   V  +++ S  +  E K    +I     F++   S +K+    L    LD P+S
Sbjct: 180  EELKEESVNSLSVHSEDVTAETKEKIDNI-----FSMQETSNKKVGESLLSAAFLDTPVS 234

Query: 1202 SIPGISSKQCHQLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGNYMISFXXXXXXXXX 1023
             IPG+S +Q HQLE C  HTLR+LLHHFPRTYADLQNA   + DG Y+IS          
Sbjct: 235  CIPGLSKRQHHQLENCGFHTLRKLLHHFPRTYADLQNALVGVDDGQYLISVGKILSSRGV 294

Query: 1022 XXXXXXXFLEVVVACDIANDLAASECKNDQHATEA--KKKIYLHLKKFFRGARFTNTYFL 849
                   FLEVVV C++A D    E +++   T++   + IYLHLKKFFRG RFTN  FL
Sbjct: 295  RASYSFSFLEVVVGCEVAID----ESQHNTIDTDSGETRTIYLHLKKFFRGVRFTNQPFL 350

Query: 848  KSIQSKHKEGDYVCVSGKVKAMSKEDHYEMREYNVDAIEDEKESSLHGERRPCPLYPSKG 669
            KS+ +KHK GD VC+SGKVK MS +DHYEMREYN+D ++D+  SSLH E RP P+YPSKG
Sbjct: 351  KSLANKHKLGDVVCISGKVKTMSTKDHYEMREYNIDVLKDDDVSSLHPEGRPYPIYPSKG 410

Query: 668  GVKPDFFRAMISRSV 624
            G+ PDF R +I+R++
Sbjct: 411  GLNPDFLRDIIARAL 425


>ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|222863848|gb|EEF00979.1|
            predicted protein [Populus trichocarpa]
          Length = 888

 Score =  257 bits (656), Expect = 9e-66
 Identities = 157/369 (42%), Positives = 213/369 (57%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1727 LGYKSVQDLVENESGQKLSGANFKDILNELEVSLACERFSSIIMGSSSPILLFDELACKS 1548
            + Y    DL+ENE+  K    N KD  ++ +VSLAC+RF SI++GSS P+ L+DE    S
Sbjct: 1    MDYDGFHDLIENETAAKQFRGNAKDDTDDFDVSLACKRFPSIVLGSSPPVELYDE----S 56

Query: 1547 EGRNHMIDQNCHICLPSSIGGEMFDVERMTEPSLDFPVAVDSSLLKELDSPVVEDLCLLE 1368
            E  + +  +     LP+++G +  D + + E               +L SP  E++    
Sbjct: 57   EINSLLAAKILEGFLPNAMGVKCVDPDTLHE---------------QLTSPHTENVN--- 98

Query: 1367 EKSSDVLPIALQSVPLQTERKPVSYDIAEKPTFTLPSESEQKIISIKLILDKPLSSIPGI 1188
                        S+P +   K VS    E+ T  +  ES+  +      LDKP+S +PG+
Sbjct: 99   -----------SSMPKELREKIVSKIGMEEYTTKVELESQVNLA----YLDKPISCLPGL 143

Query: 1187 SSKQCHQLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGNYMISFXXXXXXXXXXXXXX 1008
            S++Q  QLE C  +TLR+LL HFPRTYADLQNAH  I DG Y+IS               
Sbjct: 144  STRQRRQLENCGFYTLRKLLQHFPRTYADLQNAHFGIDDGQYLISVGKVTSSRAVKASYS 203

Query: 1007 XXFLEVVVACDIANDLAASECKNDQHATEAKKKIYLHLKKFFRGARFTNTYFLKSIQSKH 828
              F EV+VAC+I N+   S+   D + +  KK IYLHLKK+FRG RFT   FLK +++KH
Sbjct: 204  LAFAEVIVACEIINN--ESKHLIDDNNSGGKKTIYLHLKKYFRGTRFTCLPFLKKVEAKH 261

Query: 827  KEGDYVCVSGKVKAMS-KEDHYEMREYNVDAIEDEKESSLHGERRPCPLYPSKGGVKPDF 651
            K GD VCVSGKV+ MS K DHYE+REYN+D +ED ++SS   E RP P+YPSKGG+ PDF
Sbjct: 262  KLGDVVCVSGKVRTMSTKGDHYEIREYNIDVLEDREDSSSIVEGRPYPIYPSKGGLNPDF 321

Query: 650  FRAMISRSV 624
             R  ISR+V
Sbjct: 322  LRDTISRAV 330


>ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis thaliana]
            gi|330250357|gb|AEC05451.1| ATP-dependent DNA helicase
            RecG [Arabidopsis thaliana]
          Length = 973

 Score =  253 bits (646), Expect = 1e-64
 Identities = 154/422 (36%), Positives = 227/422 (53%), Gaps = 3/422 (0%)
 Frame = -2

Query: 1880 MRFSTFLQSKLLKLCSRSNKNCAHKLLEEVNDYGKASVSDRSKLLNKVSVLLGYKSVQDL 1701
            +R S F  SK+  +  RS    +  LLE+V  Y  A + ++SKL+ KV+ L+   +V D 
Sbjct: 34   IRLSNFFFSKVWNISYRSKHKYSDNLLEQVEKYASARLENQSKLITKVAALMECDNVDDF 93

Query: 1700 VENESGQKLSGANFKDILNELEVSLACERFSSIIMGSSSPILLFDELACKSEGRNHMIDQ 1521
            ++ +S +++     KD++      LAC+RF SII+G S P+ L+       E  + +   
Sbjct: 94   IDKKSDEQVK----KDLV------LACKRFPSIILGDSRPVELYSNSKSYGESSSILKTP 143

Query: 1520 NCHICLPSSIGGEMFDVERMTEPSLDFPVAVDSSLLKELDSPVVEDLCLLEEKSSDVLPI 1341
              +  LP+ + G  FD + ++           SS   EL         L  + SSD    
Sbjct: 144  TDNSFLPTPMHGGWFDPDNLSRTL--------SSFCPEL---------LQNDDSSD---- 182

Query: 1340 ALQSVPLQTERKPVSYDIAEKPTFTLPSESE---QKIISIKLILDKPLSSIPGISSKQCH 1170
                      R+ +  D +   + T  SE E     + + +  L   + S+PG+S +  +
Sbjct: 183  ---------PREDILDDGSSFTSKTATSEVEATSDDVFAAQRFLATSIDSMPGLSKRHSN 233

Query: 1169 QLEKCDIHTLRQLLHHFPRTYADLQNAHGEIVDGNYMISFXXXXXXXXXXXXXXXXFLEV 990
            QL+ C  HT+++LLHHFPRTYADLQNA  +I DG Y+I                  FLEV
Sbjct: 234  QLDSCGFHTMKKLLHHFPRTYADLQNAQVDIEDGQYLIFVGKVLSSKGVRASSSFSFLEV 293

Query: 989  VVACDIANDLAASECKNDQHATEAKKKIYLHLKKFFRGARFTNTYFLKSIQSKHKEGDYV 810
            +V+C+++      E  +     +A K I+LHLKKFFRG RFT   FL SIQ KHK GD V
Sbjct: 294  IVSCEVSGRDRTPEDLSHNAEDKAGKSIFLHLKKFFRGTRFTWQPFLNSIQEKHKVGDLV 353

Query: 809  CVSGKVKAMSKEDHYEMREYNVDAIEDEKESSLHGERRPCPLYPSKGGVKPDFFRAMISR 630
            C+SGKVK++  EDH+EMREYN+D ++DE+ESS   + RP P+YPSKGG+ P F   +ISR
Sbjct: 354  CISGKVKSLRAEDHFEMREYNIDVLKDEEESSHRAQGRPYPIYPSKGGLNPKFLSDVISR 413

Query: 629  SV 624
            ++
Sbjct: 414  AL 415