BLASTX nr result

ID: Coptis21_contig00007260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007260
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]   171   3e-40
ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256...   169   1e-39
ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|2...   155   1e-35
emb|CBI30464.3| unnamed protein product [Vitis vinifera]              154   3e-35
ref|XP_002275792.1| PREDICTED: uncharacterized protein LOC100254...   154   3e-35

>emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]
          Length = 425

 Score =  171 bits (433), Expect = 3e-40
 Identities = 112/266 (42%), Positives = 141/266 (53%), Gaps = 24/266 (9%)
 Frame = -2

Query: 1183 DAWDLLYAAAGEVVRMRLNEEGSKF--GRGLLAVPQNPTPKNSP----ANVVFYPNHSXX 1022
            DAWDL+YAAAG+V R++++ +G K+  GRGLL  P++P P  +     AN  FY   S  
Sbjct: 170  DAWDLIYAAAGQVARLKMSGDGPKYQQGRGLLGPPRSPMPVPTQPAKNANTGFYSYQSLS 229

Query: 1021 XXXXXXXXXXXXXXXXXXXXQREQISNVWGRXXXXXXXXXXXXXXXH-----GGRALAFG 857
                                  +Q  +VWGR                       R++   
Sbjct: 230  NNISQTSQSQXIRQEQVL----KQQCSVWGREAKEAWFSQQQQQLQQQQQIHSRRSVGLE 285

Query: 856  NGRSTRPLGLPQSAWPPLQNQ---SQNGSGMRAVFLXXXXXXXXXXXXGVFLPRRNGVTS 686
            +GR  RPLGLP SAWPPLQ+Q    Q+ SGMRAVFL            GVFLPRR G  S
Sbjct: 286  SGRCGRPLGLPPSAWPPLQHQHQHQQSSSGMRAVFLGGSGLKRESAGTGVFLPRRFGNXS 345

Query: 685  ESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQTRFVAGFHGGFG----------NSH 536
            +SRKKPGCSTVL+PARVVQALNLNF+D+G   Q        F+GG            N+ 
Sbjct: 346  DSRKKPGCSTVLLPARVVQALNLNFEDMGSHSQPH------FNGGVAPDYEALMARRNAL 399

Query: 535  FQQPKRSYRPQPAINTEVQLPQEWTY 458
              Q KR+ RP+  +N E++LPQEWTY
Sbjct: 400  ISQQKRNLRPEXTMNHEIRLPQEWTY 425


>ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256408 [Vitis vinifera]
          Length = 417

 Score =  169 bits (429), Expect = 1e-39
 Identities = 112/268 (41%), Positives = 141/268 (52%), Gaps = 26/268 (9%)
 Frame = -2

Query: 1183 DAWDLLYAAAGEVVRMRLNEEGSKF--GRGLLAVPQNPTPKNSP----ANVVFYPNHSXX 1022
            DAWDL+YAAAG+V R++++ +G K+  GRGLL  P++P P  +     AN  FY   S  
Sbjct: 160  DAWDLIYAAAGQVARLKMSGDGPKYQQGRGLLGPPRSPMPVPAQPAKNANTGFY---SYQ 216

Query: 1021 XXXXXXXXXXXXXXXXXXXXQREQISNVWGRXXXXXXXXXXXXXXXH-----GGRALAFG 857
                                 ++Q S VWGR                       R++   
Sbjct: 217  GLSNNISQTSQSQHIRQEQVLKQQCS-VWGREAKEAWFSQQQQQLQQQQQIHSRRSVGLE 275

Query: 856  NGRSTRPLGLPQSAWPPLQNQ-----SQNGSGMRAVFLXXXXXXXXXXXXGVFLPRRNGV 692
            +GR  RPLGLP SAWPPLQ+Q      Q+ SGMRAVFL            GVFLPRR G 
Sbjct: 276  SGRCGRPLGLPPSAWPPLQHQHQHQHQQSSSGMRAVFLGGSGLKRESAGTGVFLPRRFGN 335

Query: 691  TSESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQTRFVAGFHGGFG----------N 542
             S+SRKKPGCSTVL+PARVVQALNLNF+D+G   Q        F+GG            N
Sbjct: 336  ASDSRKKPGCSTVLLPARVVQALNLNFEDMGSHSQPH------FNGGVAPDYEALMARRN 389

Query: 541  SHFQQPKRSYRPQPAINTEVQLPQEWTY 458
            +   Q KR+ RP+  +N E++LPQEWTY
Sbjct: 390  ALISQQKRNLRPEGTMNHEIRLPQEWTY 417


>ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|222865288|gb|EEF02419.1|
            predicted protein [Populus trichocarpa]
          Length = 416

 Score =  155 bits (393), Expect = 1e-35
 Identities = 108/274 (39%), Positives = 137/274 (50%), Gaps = 32/274 (11%)
 Frame = -2

Query: 1183 DAWDLLYAAAGEVVRMRL-NEEGSKF-------GRGLLAVPQNPTPKNSPA---NVVFYP 1037
            D WDL+YAAAG+V R+++ N EG +        GRGLL   +   P  +     N  FYP
Sbjct: 143  DTWDLIYAAAGQVARLKMTNNEGHRCNSSNNFQGRGLLGPARTQNPDLTSVKHQNTGFYP 202

Query: 1036 NHSXXXXXXXXXXXXXXXXXXXXXXQ--REQISNVWGRXXXXXXXXXXXXXXXHG----- 878
            + S                      Q  R+Q S++W R               H      
Sbjct: 203  SQSSSTFGNNIPQVNQYQQLVRQEQQALRQQCSSIWERQQVKTSWQAQPQFHQHQHQQVQ 262

Query: 877  --GRALAFGNGRSTRPLGLPQSAWPPLQ----NQSQNGSGMRAVFLXXXXXXXXXXXXGV 716
              GR + + +GR  RPLGLPQSAWPPLQ    NQ  N +GMRAVFL            GV
Sbjct: 263  SRGRDVRYEDGRCGRPLGLPQSAWPPLQVHPQNQHSNSAGMRAVFLGGSGVKRECAGTGV 322

Query: 715  FLPRRNGVTSESRKKPGCSTVLVPARVVQALNLNFD--DLGGGVQQQTRFVAGFHGGFG- 545
            FLPRR G   + +KK GCSTVL+PA+VVQALNLNFD  D+ G  Q +    A FH  +  
Sbjct: 323  FLPRRYGNPPDPKKKSGCSTVLLPAKVVQALNLNFDDMDISGLAQPRLNNNASFHSEYDA 382

Query: 544  -----NSHFQQPKRSYRPQPAINTEVQLPQEWTY 458
                 N+   Q KR+ R +  +N E++LPQEWTY
Sbjct: 383  LMARRNALLAQQKRNLRQENVLNREIRLPQEWTY 416


>emb|CBI30464.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  154 bits (390), Expect = 3e-35
 Identities = 106/264 (40%), Positives = 132/264 (50%), Gaps = 24/264 (9%)
 Frame = -2

Query: 1177 WDLLYAAAGEVVRMRLNEE--GSKFGRGLLAVPQNPT-----PKNSPANVVFYPNHSXXX 1019
            WDLLYAAAGEV ++R+N+E  G +  RGLLA P+ P+      KN+  +  FY N S   
Sbjct: 128  WDLLYAAAGEVAKIRMNDEEYGYQQSRGLLAPPRKPSLISVPVKNANTDAGFYSNRSVSH 187

Query: 1018 XXXXXXXXXXXXXXXXXXXQREQISNVWG-RXXXXXXXXXXXXXXXHGGRALAFGNGRST 842
                                +++   VWG +               + G++   G  RS 
Sbjct: 188  QQFQATQFQQLKQQQMM---KQRPQAVWGGQQQKGTGLYQPQQVIQNRGKSNEVGINRSN 244

Query: 841  RPLGLPQSAWPPLQNQSQN------GSGMRAVFLXXXXXXXXXXXXGVFLPRRNGVTSES 680
            RPLGL  SAWPPLQ Q Q       GSGMR VFL            GVFLPRR G   E 
Sbjct: 245  RPLGLSLSAWPPLQAQQQQQQPQQGGSGMRVVFLGTHGSRKECAGTGVFLPRRVGNPPEM 304

Query: 679  RKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQTRFVAGF----------HGGFGNSHFQ 530
            RKK GCST L+PARVVQALNL  DD+G   Q   RF   F             +G +  Q
Sbjct: 305  RKKSGCSTALLPARVVQALNLKLDDVGSQTQLHPRFNGSFAPDVDAAVKLRSSYGFACEQ 364

Query: 529  QPKRSYRPQPAINTEVQLPQEWTY 458
              +R++R QP +N E++LPQEWTY
Sbjct: 365  --RRAFRAQPVMNHEIRLPQEWTY 386


>ref|XP_002275792.1| PREDICTED: uncharacterized protein LOC100254537 [Vitis vinifera]
          Length = 409

 Score =  154 bits (390), Expect = 3e-35
 Identities = 106/264 (40%), Positives = 132/264 (50%), Gaps = 24/264 (9%)
 Frame = -2

Query: 1177 WDLLYAAAGEVVRMRLNEE--GSKFGRGLLAVPQNPT-----PKNSPANVVFYPNHSXXX 1019
            WDLLYAAAGEV ++R+N+E  G +  RGLLA P+ P+      KN+  +  FY N S   
Sbjct: 151  WDLLYAAAGEVAKIRMNDEEYGYQQSRGLLAPPRKPSLISVPVKNANTDAGFYSNRSVSH 210

Query: 1018 XXXXXXXXXXXXXXXXXXXQREQISNVWG-RXXXXXXXXXXXXXXXHGGRALAFGNGRST 842
                                +++   VWG +               + G++   G  RS 
Sbjct: 211  QQFQATQFQQLKQQQMM---KQRPQAVWGGQQQKGTGLYQPQQVIQNRGKSNEVGINRSN 267

Query: 841  RPLGLPQSAWPPLQNQSQN------GSGMRAVFLXXXXXXXXXXXXGVFLPRRNGVTSES 680
            RPLGL  SAWPPLQ Q Q       GSGMR VFL            GVFLPRR G   E 
Sbjct: 268  RPLGLSLSAWPPLQAQQQQQQPQQGGSGMRVVFLGTHGSRKECAGTGVFLPRRVGNPPEM 327

Query: 679  RKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQTRFVAGF----------HGGFGNSHFQ 530
            RKK GCST L+PARVVQALNL  DD+G   Q   RF   F             +G +  Q
Sbjct: 328  RKKSGCSTALLPARVVQALNLKLDDVGSQTQLHPRFNGSFAPDVDAAVKLRSSYGFACEQ 387

Query: 529  QPKRSYRPQPAINTEVQLPQEWTY 458
              +R++R QP +N E++LPQEWTY
Sbjct: 388  --RRAFRAQPVMNHEIRLPQEWTY 409


Top