BLASTX nr result

ID: Coptis21_contig00007259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007259
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521730.1| 50S robosomal protein L11, putative [Ricinus...   253   4e-65
ref|XP_002277084.1| PREDICTED: 60S ribosomal protein L19, mitoch...   249   6e-64
ref|XP_002304331.1| predicted protein [Populus trichocarpa] gi|1...   247   2e-63
ref|XP_004142176.1| PREDICTED: 54S ribosomal protein L19, mitoch...   246   5e-63
gb|AEO33263.1| hypothetical protein [Amblyomma maculatum]             231   2e-58

>ref|XP_002521730.1| 50S robosomal protein L11, putative [Ricinus communis]
           gi|223539121|gb|EEF40717.1| 50S robosomal protein L11,
           putative [Ricinus communis]
          Length = 155

 Score =  253 bits (645), Expect = 4e-65
 Identities = 127/155 (81%), Positives = 136/155 (87%)
 Frame = +2

Query: 80  MASLKEILTRRPVSATIKLTXXXXXXXXXXXXXXXLGQYRLNLMAFCKDFNARTQKYKPD 259
           MA+LKEILTRRPV+ATI+LT               LGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 260 TPMAVKITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKV 439
           TPMAV ITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGS RPGHVVAST++LKHVYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTVTLKHVYEIAKV 120

Query: 440 KQSDPYCQSMSLESISKSIIGTANSMGIKVQKELD 544
           KQSDPYCQ MSLESISKS+IGTAN+MGIKV K+LD
Sbjct: 121 KQSDPYCQYMSLESISKSVIGTANAMGIKVVKDLD 155


>ref|XP_002277084.1| PREDICTED: 60S ribosomal protein L19, mitochondrial [Vitis
           vinifera] gi|147806139|emb|CAN70008.1| hypothetical
           protein VITISV_038751 [Vitis vinifera]
          Length = 155

 Score =  249 bits (635), Expect = 6e-64
 Identities = 125/155 (80%), Positives = 135/155 (87%)
 Frame = +2

Query: 80  MASLKEILTRRPVSATIKLTXXXXXXXXXXXXXXXLGQYRLNLMAFCKDFNARTQKYKPD 259
           M+SLKEILTRRPVSATI+LT               LGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MSSLKEILTRRPVSATIRLTVPAGAARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 260 TPMAVKITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKV 439
           TPMAV ITA+KDNTFEFTVKSPSVTWYLKKAAGI+ GSGRPGHVVAS+++LKH+YEIAKV
Sbjct: 61  TPMAVTITAYKDNTFEFTVKSPSVTWYLKKAAGIELGSGRPGHVVASSVTLKHIYEIAKV 120

Query: 440 KQSDPYCQSMSLESISKSIIGTANSMGIKVQKELD 544
           KQSDPYCQ MSLESI KSIIGTAN+MGI+V KELD
Sbjct: 121 KQSDPYCQYMSLESICKSIIGTANTMGIQVVKELD 155


>ref|XP_002304331.1| predicted protein [Populus trichocarpa] gi|118482503|gb|ABK93174.1|
           unknown [Populus trichocarpa]
           gi|222841763|gb|EEE79310.1| predicted protein [Populus
           trichocarpa]
          Length = 155

 Score =  247 bits (631), Expect = 2e-63
 Identities = 123/155 (79%), Positives = 135/155 (87%)
 Frame = +2

Query: 80  MASLKEILTRRPVSATIKLTXXXXXXXXXXXXXXXLGQYRLNLMAFCKDFNARTQKYKPD 259
           MA+LKEILTRRPV+ATI+LT               LGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 260 TPMAVKITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKV 439
           TPM+V ITAFKDNTFEFTVKSPSVTWYLKKAAG++SGSGRPGH+ AST++LKHVYEIAKV
Sbjct: 61  TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGVESGSGRPGHLEASTVTLKHVYEIAKV 120

Query: 440 KQSDPYCQSMSLESISKSIIGTANSMGIKVQKELD 544
           KQSDPYCQ MSLESI KSI+GTAN+MGIKV K+LD
Sbjct: 121 KQSDPYCQYMSLESICKSIMGTANTMGIKVVKDLD 155


>ref|XP_004142176.1| PREDICTED: 54S ribosomal protein L19, mitochondrial-like [Cucumis
           sativus] gi|449503431|ref|XP_004161999.1| PREDICTED: 54S
           ribosomal protein L19, mitochondrial-like [Cucumis
           sativus]
          Length = 155

 Score =  246 bits (627), Expect = 5e-63
 Identities = 124/155 (80%), Positives = 133/155 (85%)
 Frame = +2

Query: 80  MASLKEILTRRPVSATIKLTXXXXXXXXXXXXXXXLGQYRLNLMAFCKDFNARTQKYKPD 259
           MA+LKEILTRRPV+ATI+LT               LGQYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 260 TPMAVKITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKV 439
           TPMAV ITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGS RPGHVVAST+S+KH+YEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 440 KQSDPYCQSMSLESISKSIIGTANSMGIKVQKELD 544
           KQSDPYCQ M LESI KSIIGTANSMGIKV  EL+
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155


>gb|AEO33263.1| hypothetical protein [Amblyomma maculatum]
          Length = 184

 Score =  231 bits (588), Expect = 2e-58
 Identities = 116/154 (75%), Positives = 128/154 (83%)
 Frame = +2

Query: 80  MASLKEILTRRPVSATIKLTXXXXXXXXXXXXXXXLGQYRLNLMAFCKDFNARTQKYKPD 259
           M+ LKE + RRP+SATIKLT               LGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 31  MSILKETVIRRPISATIKLTVPAGAARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 90

Query: 260 TPMAVKITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSGRPGHVVASTISLKHVYEIAKV 439
           TPMAV ITAFKDNTFEF VKSPS+TWYLK+AAGI+SGSGRPGHVV S+I+L HVYEIAKV
Sbjct: 91  TPMAVTITAFKDNTFEFVVKSPSITWYLKRAAGIESGSGRPGHVVVSSITLTHVYEIAKV 150

Query: 440 KQSDPYCQSMSLESISKSIIGTANSMGIKVQKEL 541
           KQSDP CQ MSLE+I KSIIGTAN+MGI+V K+L
Sbjct: 151 KQSDPNCQYMSLEAICKSIIGTANTMGIQVVKDL 184


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