BLASTX nr result

ID: Coptis21_contig00007256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007256
         (1541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302707.1| predicted protein [Populus trichocarpa] gi|2...   562   e-157
ref|XP_002264804.1| PREDICTED: WD repeat-containing protein 89 h...   559   e-157
emb|CAN75889.1| hypothetical protein VITISV_023641 [Vitis vinifera]   559   e-157
ref|XP_002523062.1| WD-repeat protein, putative [Ricinus communi...   553   e-155
ref|XP_002320348.1| predicted protein [Populus trichocarpa] gi|2...   545   e-152

>ref|XP_002302707.1| predicted protein [Populus trichocarpa] gi|222844433|gb|EEE81980.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  562 bits (1448), Expect = e-157
 Identities = 266/371 (71%), Positives = 306/371 (82%), Gaps = 1/371 (0%)
 Frame = +3

Query: 69   KRFGLKNSIQTNFGEDYVFQIVSNQESSTLAVSLSTNAIKFYSPVTGQYIGQCKDAHAAP 248
            K+ GLKNSIQTNFG DYVFQIV   + S++AVSLST A+K YSP TGQ+ G+CK  H+  
Sbjct: 9    KKLGLKNSIQTNFGNDYVFQIVPKDDWSSMAVSLSTKAVKLYSPETGQFQGECK-GHSDT 67

Query: 249  INHIXXXXXXXXX-PFVLHSCSSDGTVKTWDTRTFNQVSLFNAGSMQEVFSFSFGGASDN 425
            IN I          P VLHSCSSDGT++ WDTRTF QVS  +AGS QE+FSFSFGG++DN
Sbjct: 68   INQISFSVSSSSSSPHVLHSCSSDGTIRAWDTRTFQQVSCISAGSYQEIFSFSFGGSNDN 127

Query: 426  LLAAGCKTEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTE 605
            LLAAG K+++LFWDWRNGKQVACLEESH +DVTQV F PD+RNKL SASVDGL+C F+T+
Sbjct: 128  LLAAGAKSQILFWDWRNGKQVACLEESHTEDVTQVHFVPDNRNKLLSASVDGLMCIFNTD 187

Query: 606  GNINDDDHLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWNDGRNQADFQDART 785
            G+INDDDHLESV+NVGTSIG++GF GE   KLWCLTHIESLSIWDW D RN+A+  +AR+
Sbjct: 188  GDINDDDHLESVINVGTSIGKVGFFGETYKKLWCLTHIESLSIWDWKDARNEANLLEARS 247

Query: 786  LASDSWTLDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGG 965
            LASDSWTLDHVDYFVDCHY G    LWVIGGTNAG LGYFPV+YRG GAIGSPEAIL GG
Sbjct: 248  LASDSWTLDHVDYFVDCHYPGEGESLWVIGGTNAGALGYFPVNYRGVGAIGSPEAILGGG 307

Query: 966  HLGVVRSVLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKFQ 1145
            H GVVRSVLP+S   GG A +Q IFGWTGGEDGRLCCWLSD+++E+N+SWIS+ALVMK  
Sbjct: 308  HTGVVRSVLPVSSKKGGLAQSQSIFGWTGGEDGRLCCWLSDDSTEINRSWISSALVMKPS 367

Query: 1146 KTLKKNRHHPY 1178
            K  KK RH+PY
Sbjct: 368  KARKKKRHNPY 378


>ref|XP_002264804.1| PREDICTED: WD repeat-containing protein 89 homolog [Vitis vinifera]
          Length = 388

 Score =  559 bits (1441), Expect = e-157
 Identities = 264/371 (71%), Positives = 303/371 (81%)
 Frame = +3

Query: 66   LKRFGLKNSIQTNFGEDYVFQIVSNQESSTLAVSLSTNAIKFYSPVTGQYIGQCKDAHAA 245
            LKRF LKNSIQTNFG+DYVFQIV+  + + +AVSLSTNA+K YSPVTGQY+G+C+  H+ 
Sbjct: 21   LKRFALKNSIQTNFGDDYVFQIVARDDWTAMAVSLSTNAVKLYSPVTGQYLGECR-GHST 79

Query: 246  PINHIXXXXXXXXXPFVLHSCSSDGTVKTWDTRTFNQVSLFNAGSMQEVFSFSFGGASDN 425
             INHI           +LHSCSSDGT++ WDTRTFNQV   +AGS QEVFSFS GG  D 
Sbjct: 80   TINHISFSGPGNSH--ILHSCSSDGTIRAWDTRTFNQVLCISAGSSQEVFSFSIGGLGDY 137

Query: 426  LLAAGCKTEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTE 605
            LLAAGCK+++LFWDWRN KQVACLE+SHVDDVTQV F P  +NKL SASVDGLICTFDT 
Sbjct: 138  LLAAGCKSQILFWDWRNKKQVACLEDSHVDDVTQVHFVPSDKNKLVSASVDGLICTFDTV 197

Query: 606  GNINDDDHLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWNDGRNQADFQDART 785
            G+INDDDHLESV+NV TSIG++GF G+   KLWCLTHIE+LS+WDW + R +A+FQDAR+
Sbjct: 198  GDINDDDHLESVINVDTSIGKVGFLGDTYQKLWCLTHIETLSVWDWKEARIEANFQDARS 257

Query: 786  LASDSWTLDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGG 965
            LASDSWTLD V+YFVDCHYSG D RLWVIGGTNAG LGYFPV+Y+G GAIG PEA+LEGG
Sbjct: 258  LASDSWTLDRVNYFVDCHYSGDDQRLWVIGGTNAGTLGYFPVNYQGMGAIGPPEAVLEGG 317

Query: 966  HLGVVRSVLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKFQ 1145
            H GVVRSVLPMS    G A +QGIFGWTGGEDGRLCCW SD + E N+SWIS+  VMK  
Sbjct: 318  HTGVVRSVLPMSSKQIGTAQSQGIFGWTGGEDGRLCCWFSDGSPETNRSWISSEFVMKSP 377

Query: 1146 KTLKKNRHHPY 1178
            +T KKNRH PY
Sbjct: 378  RTCKKNRHLPY 388


>emb|CAN75889.1| hypothetical protein VITISV_023641 [Vitis vinifera]
          Length = 383

 Score =  559 bits (1441), Expect = e-157
 Identities = 264/371 (71%), Positives = 303/371 (81%)
 Frame = +3

Query: 66   LKRFGLKNSIQTNFGEDYVFQIVSNQESSTLAVSLSTNAIKFYSPVTGQYIGQCKDAHAA 245
            LKRF LKNSIQTNFG+DYVFQIV+  + + +AVSLSTNA+K YSPVTGQY+G+C+  H+ 
Sbjct: 16   LKRFALKNSIQTNFGDDYVFQIVARDDWTAMAVSLSTNAVKLYSPVTGQYLGECR-GHST 74

Query: 246  PINHIXXXXXXXXXPFVLHSCSSDGTVKTWDTRTFNQVSLFNAGSMQEVFSFSFGGASDN 425
             INHI           +LHSCSSDGT++ WDTRTFNQV   +AGS QEVFSFS GG  D 
Sbjct: 75   TINHISFSGPGNSH--ILHSCSSDGTIRAWDTRTFNQVLCISAGSSQEVFSFSIGGLGDY 132

Query: 426  LLAAGCKTEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTE 605
            LLAAGCK+++LFWDWRN KQVACLE+SHVDDVTQV F P  +NKL SASVDGLICTFDT 
Sbjct: 133  LLAAGCKSQILFWDWRNKKQVACLEDSHVDDVTQVHFVPSDKNKLVSASVDGLICTFDTV 192

Query: 606  GNINDDDHLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWNDGRNQADFQDART 785
            G+INDDDHLESV+NV TSIG++GF G+   KLWCLTHIE+LS+WDW + R +A+FQDAR+
Sbjct: 193  GDINDDDHLESVINVDTSIGKVGFLGDTYQKLWCLTHIETLSVWDWKEARIEANFQDARS 252

Query: 786  LASDSWTLDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGG 965
            LASDSWTLD V+YFVDCHYSG D RLWVIGGTNAG LGYFPV+Y+G GAIG PEA+LEGG
Sbjct: 253  LASDSWTLDRVNYFVDCHYSGDDQRLWVIGGTNAGTLGYFPVNYQGMGAIGPPEAVLEGG 312

Query: 966  HLGVVRSVLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKFQ 1145
            H GVVRSVLPMS    G A +QGIFGWTGGEDGRLCCW SD + E N+SWIS+  VMK  
Sbjct: 313  HTGVVRSVLPMSSKQIGTAQSQGIFGWTGGEDGRLCCWFSDGSPETNRSWISSEFVMKSP 372

Query: 1146 KTLKKNRHHPY 1178
            +T KKNRH PY
Sbjct: 373  RTCKKNRHLPY 383


>ref|XP_002523062.1| WD-repeat protein, putative [Ricinus communis]
            gi|223537624|gb|EEF39247.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 389

 Score =  553 bits (1424), Expect = e-155
 Identities = 262/392 (66%), Positives = 308/392 (78%), Gaps = 1/392 (0%)
 Frame = +3

Query: 6    MDAAMDMEVEXXXXXXXXXXLKRFGLKNSIQTNFGEDYVFQIVSNQESSTLAVSLSTNAI 185
            M+ AM++EVE           KRFGLK+  QTNFG+DYVFQIV   + ST+AVSLST A+
Sbjct: 1    MEEAMEVEVEHPNPNPNPNCAKRFGLKSCFQTNFGDDYVFQIVPKADCSTMAVSLSTYAV 60

Query: 186  KFYSPVTGQYIGQCKDAHAAPINHIXXXXXXXXXPFVLHSCSSDGTVKTWDTRTFNQVSL 365
            K YSP+TGQY G+CK  H+  IN I         P VLHSCSSDGT++ WDTRTF QVS 
Sbjct: 61   KLYSPLTGQYQGECK-GHSDTINQIAFSASSS--PHVLHSCSSDGTMRAWDTRTFRQVSC 117

Query: 366  FNAGSMQEVFSFSFGGASDNLLAAGCKTEVLFWDWRNGKQVACLEESHVDDVTQVQFCPD 545
              A + QE+FSFSFGG++DNLLAAG K+++LFWDWRN KQVACLEESH DDVTQV F P 
Sbjct: 118  ITAAASQEIFSFSFGGSTDNLLAAGSKSQILFWDWRNKKQVACLEESHTDDVTQVHFVPG 177

Query: 546  HRNKLFSASVDGLICTFDTEGNINDDDHLESVMNVGTSIGRIGFCGEMSNKLWCLTHIES 725
            H NKL SASVDGL+C FDT G+INDDDHLESV+NVGTS+G++GF GE   KLWCLTHIES
Sbjct: 178  HGNKLLSASVDGLMCIFDTNGDINDDDHLESVINVGTSVGKVGFFGENYQKLWCLTHIES 237

Query: 726  LSIWDWNDGRNQADFQDARTLASDSWTLDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYF 905
            LSIWDW D RN+A+ Q+AR++AS +W LD +DYFVDCHY G    LWVIGGTNAG LGYF
Sbjct: 238  LSIWDWEDARNEANLQEARSMASKNWALDQIDYFVDCHYPGEGESLWVIGGTNAGALGYF 297

Query: 906  PVDYR-GTGAIGSPEAILEGGHLGVVRSVLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWL 1082
            PV+YR G  AIGSPEAILEGGH GVVRS+LP+S L GG A +QGIFGWTGGEDGRLCCWL
Sbjct: 298  PVNYRGGAAAIGSPEAILEGGHSGVVRSILPLSSLKGGPAQSQGIFGWTGGEDGRLCCWL 357

Query: 1083 SDETSEVNQSWISNALVMKFQKTLKKNRHHPY 1178
            SD ++ +++SW+S+AL M+   + KKNRHHPY
Sbjct: 358  SDNSARIDRSWMSSALAMRSSTSRKKNRHHPY 389


>ref|XP_002320348.1| predicted protein [Populus trichocarpa] gi|222861121|gb|EEE98663.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  545 bits (1404), Expect = e-152
 Identities = 259/370 (70%), Positives = 304/370 (82%)
 Frame = +3

Query: 69   KRFGLKNSIQTNFGEDYVFQIVSNQESSTLAVSLSTNAIKFYSPVTGQYIGQCKDAHAAP 248
            K+FGLKNSIQTNFG DYVFQIV   + S++AVSLST A+K YSPVTGQ+ G+CK  H+  
Sbjct: 9    KKFGLKNSIQTNFGNDYVFQIVPKDDWSSVAVSLSTKAVKLYSPVTGQFQGECK-GHSDT 67

Query: 249  INHIXXXXXXXXXPFVLHSCSSDGTVKTWDTRTFNQVSLFNAGSMQEVFSFSFGGASDNL 428
            IN I         P +LHSCSSDGT++ WDTR F QVS  ++GS QE+FSFSFGG++DNL
Sbjct: 68   INQIAFSVSSS--PHLLHSCSSDGTIRAWDTRNFQQVSCIDSGSSQEIFSFSFGGSNDNL 125

Query: 429  LAAGCKTEVLFWDWRNGKQVACLEESHVDDVTQVQFCPDHRNKLFSASVDGLICTFDTEG 608
            LAAG K++VLFWDWRNGKQVACLEESH++DVTQV F PD+RNKL SASVDGL+C F+T+G
Sbjct: 126  LAAGAKSQVLFWDWRNGKQVACLEESHIEDVTQVHFVPDNRNKLLSASVDGLMCIFNTDG 185

Query: 609  NINDDDHLESVMNVGTSIGRIGFCGEMSNKLWCLTHIESLSIWDWNDGRNQADFQDARTL 788
            +INDDD LESV+NVGTSIG++GF GE   KLWCLTHIESLSIWDW D RN+A+F +AR+L
Sbjct: 186  DINDDDDLESVINVGTSIGKVGFFGETYQKLWCLTHIESLSIWDWKDSRNEANFLEARSL 245

Query: 789  ASDSWTLDHVDYFVDCHYSGADGRLWVIGGTNAGNLGYFPVDYRGTGAIGSPEAILEGGH 968
            ASDSWTLDHVDYFVDCHY G    LW+IGGTNAG LGYFPV+++G   IGSPEAIL GGH
Sbjct: 246  ASDSWTLDHVDYFVDCHYPGEGDSLWLIGGTNAGALGYFPVNHKG---IGSPEAILGGGH 302

Query: 969  LGVVRSVLPMSCLNGGHAPNQGIFGWTGGEDGRLCCWLSDETSEVNQSWISNALVMKFQK 1148
             GVVRSVLPMS + GG A ++GIFGWTGGEDGRLCCWLSD+++ +N+SWIS+ALV K  K
Sbjct: 303  TGVVRSVLPMSSMKGGPAQSRGIFGWTGGEDGRLCCWLSDDSTGINRSWISSALVKKSPK 362

Query: 1149 TLKKNRHHPY 1178
              KK R  PY
Sbjct: 363  ARKKKRRTPY 372


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