BLASTX nr result

ID: Coptis21_contig00007254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007254
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37381.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   163   2e-38
ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   155   2e-36
ref|NP_001057158.1| Os06g0218500 [Oryza sativa Japonica Group] g...   152   2e-35
gb|EEE65340.1| hypothetical protein OsJ_20610 [Oryza sativa Japo...   152   2e-35

>emb|CBI37381.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/104 (77%), Positives = 90/104 (86%)
 Frame = -2

Query: 396 PILALSVNTTLSGPLLSRFDIVLVLLDTKNPEWDKIVSSHILAEQEEPEKGKRSEDLKSV 217
           P  +LSVNTTLSGPLLSRFDIVLVLLDTKNPEWD +VSSHILAE EE E GKR E+L ++
Sbjct: 465 PGQSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEPEESENGKRDENLANI 524

Query: 216 WSLTDLRRYIHYVKQRFKPILTKEAERIISSYYQLQRRSATDNA 85
           W L  LRRYIH+VK  FKP+LTKEAE++ISSYYQLQRRSAT NA
Sbjct: 525 WPLPLLRRYIHFVKGYFKPVLTKEAEKVISSYYQLQRRSATHNA 568


>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
           vinifera]
          Length = 644

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/104 (77%), Positives = 90/104 (86%)
 Frame = -2

Query: 396 PILALSVNTTLSGPLLSRFDIVLVLLDTKNPEWDKIVSSHILAEQEEPEKGKRSEDLKSV 217
           P  +LSVNTTLSGPLLSRFDIVLVLLDTKNPEWD +VSSHILAE EE E GKR E+L ++
Sbjct: 465 PGQSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEPEESENGKRDENLANI 524

Query: 216 WSLTDLRRYIHYVKQRFKPILTKEAERIISSYYQLQRRSATDNA 85
           W L  LRRYIH+VK  FKP+LTKEAE++ISSYYQLQRRSAT NA
Sbjct: 525 WPLPLLRRYIHFVKGYFKPVLTKEAEKVISSYYQLQRRSATHNA 568


>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
           gi|223534830|gb|EEF36519.1| Minichromosome maintenance
           protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/104 (75%), Positives = 88/104 (84%)
 Frame = -2

Query: 396 PILALSVNTTLSGPLLSRFDIVLVLLDTKNPEWDKIVSSHILAEQEEPEKGKRSEDLKSV 217
           P   LSVNT LSGPLLSRFDIVLVLLDTKNPEWD +VSSHILAE+E   KG  ++DL ++
Sbjct: 471 PYQTLSVNTALSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEKESG-KGNENDDLANI 529

Query: 216 WSLTDLRRYIHYVKQRFKPILTKEAERIISSYYQLQRRSATDNA 85
           W+L  LRRYIH+VK  FKPILT EAE+IISSYYQLQRRSATDNA
Sbjct: 530 WTLAMLRRYIHFVKGYFKPILTTEAEKIISSYYQLQRRSATDNA 573


>ref|NP_001057158.1| Os06g0218500 [Oryza sativa Japonica Group]
           gi|51091369|dbj|BAD36103.1| putative DNA replication
           licensing factor MCM2 [Oryza sativa Japonica Group]
           gi|51535360|dbj|BAD37231.1| putative DNA replication
           licensing factor MCM2 [Oryza sativa Japonica Group]
           gi|113595198|dbj|BAF19072.1| Os06g0218500 [Oryza sativa
           Japonica Group] gi|215713570|dbj|BAG94707.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 674

 Score =  152 bits (385), Expect = 2e-35
 Identities = 79/104 (75%), Positives = 89/104 (85%)
 Frame = -2

Query: 396 PILALSVNTTLSGPLLSRFDIVLVLLDTKNPEWDKIVSSHILAEQEEPEKGKRSEDLKSV 217
           P  +LSVNTTLSGPLLSRFDIVLVLLDTKN +WDKIVSSHILAE  E +KGK S D + +
Sbjct: 481 PNESLSVNTTLSGPLLSRFDIVLVLLDTKNKKWDKIVSSHILAENTEEKKGKTS-DPEVM 539

Query: 216 WSLTDLRRYIHYVKQRFKPILTKEAERIISSYYQLQRRSATDNA 85
           W+L+ LRRYIHYVKQ FKP+LTKEAER+ISSYYQ QR+S T NA
Sbjct: 540 WTLSMLRRYIHYVKQHFKPVLTKEAERVISSYYQRQRQSGTRNA 583


>gb|EEE65340.1| hypothetical protein OsJ_20610 [Oryza sativa Japonica Group]
          Length = 711

 Score =  152 bits (385), Expect = 2e-35
 Identities = 79/104 (75%), Positives = 89/104 (85%)
 Frame = -2

Query: 396 PILALSVNTTLSGPLLSRFDIVLVLLDTKNPEWDKIVSSHILAEQEEPEKGKRSEDLKSV 217
           P  +LSVNTTLSGPLLSRFDIVLVLLDTKN +WDKIVSSHILAE  E +KGK S D + +
Sbjct: 518 PNESLSVNTTLSGPLLSRFDIVLVLLDTKNKKWDKIVSSHILAENTEEKKGKTS-DPEVM 576

Query: 216 WSLTDLRRYIHYVKQRFKPILTKEAERIISSYYQLQRRSATDNA 85
           W+L+ LRRYIHYVKQ FKP+LTKEAER+ISSYYQ QR+S T NA
Sbjct: 577 WTLSMLRRYIHYVKQHFKPVLTKEAERVISSYYQRQRQSGTRNA 620


Top