BLASTX nr result

ID: Coptis21_contig00007247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007247
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38713.3| unnamed protein product [Vitis vinifera]               74   2e-25
ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi comple...    68   5e-25
emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]            74   1e-24
ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana] ...    74   1e-24
gb|AAC19289.1| contains similarity to Arabidopsis membrane-assoc...    74   1e-24

>emb|CBI38713.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 73.9 bits (180), Expect(2) = 2e-25
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = +3

Query: 216 GGGSEVNFVGCLTNLFRDIVLAVEENDEILRSLCGEDAIAYAI 344
           G  S VNFVGCLTNLF+DIVLAV+EN EILRSLCGED I YAI
Sbjct: 219 GNQSNVNFVGCLTNLFKDIVLAVQENSEILRSLCGEDGIVYAI 261



 Score = 67.0 bits (162), Expect(2) = 2e-25
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = +1

Query: 58  RRDHSSILRFVKLFLPXXXXXXXXRVYVAYLKKGIAMRSRLEYEHLVEVMEQ 213
           +RDH +ILRFV+LF P        ++YV YLKK I MRSRLEYEHLVE+MEQ
Sbjct: 165 QRDHPTILRFVRLFSPLNLEEEGLQMYVNYLKKVIGMRSRLEYEHLVELMEQ 216


>ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
           [Glycine max]
          Length = 1114

 Score = 67.8 bits (164), Expect(3) = 5e-25
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = +3

Query: 231 VNFVGCLTNLFRDIVLAVEENDEILRSLCGEDAIAYAI 344
           VNFVGCLTNLF+DIVLA+EEN EIL  LCGED I YAI
Sbjct: 629 VNFVGCLTNLFKDIVLAIEENSEILSGLCGEDGIVYAI 666



 Score = 63.9 bits (154), Expect(3) = 5e-25
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +1

Query: 58  RRDHSSILRFVKLFLPXXXXXXXXRVYVAYLKKGIAMRSRLEYEHLVEVMEQ 213
           +RDH +ILRF++LF P        +VYV YLKK IAMRSR+E+E LVE+M+Q
Sbjct: 575 QRDHPAILRFIRLFTPLGVEEEGLQVYVGYLKKVIAMRSRMEFEQLVEMMDQ 626



 Score = 27.7 bits (60), Expect(3) = 5e-25
 Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
 Frame = +3

Query: 3   IDSKYKDSGS--VEREELLNSKRPFEYI 80
           ID++YKDSGS  ++R+ LL +K+  E I
Sbjct: 537 IDAQYKDSGSDQLQRDRLLAAKKQLEGI 564


>emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1117

 Score = 74.3 bits (181), Expect(2) = 1e-24
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 219 GGSEVNFVGCLTNLFRDIVLAVEENDEILRSLCGEDAIAYAI 344
           G  +VNFVGCLTNLF+DIV+A+EENDEILR LCGED +AYAI
Sbjct: 628 GLGQVNFVGCLTNLFKDIVMAIEENDEILRGLCGEDGVAYAI 669



 Score = 63.5 bits (153), Expect(2) = 1e-24
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = +1

Query: 58  RRDHSSILRFVKLFLPXXXXXXXXRVYVAYLKKGIAMRSRLEYEHLVEVMEQGV 219
           +RDH +ILRFV+L+ P        ++YV YLKK IA+R R+EYE++VE+MEQG+
Sbjct: 576 QRDHPTILRFVRLYSPLGMETEGLQLYVGYLKKVIALRGRMEYENVVELMEQGL 629


>ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
           gi|332656619|gb|AEE82019.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1110

 Score = 74.3 bits (181), Expect(2) = 1e-24
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 219 GGSEVNFVGCLTNLFRDIVLAVEENDEILRSLCGEDAIAYAI 344
           G  +VNFVGCLTNLF+DIV+A+EENDEILR LCGED +AYAI
Sbjct: 621 GLGQVNFVGCLTNLFKDIVMAIEENDEILRGLCGEDGVAYAI 662



 Score = 63.5 bits (153), Expect(2) = 1e-24
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = +1

Query: 58  RRDHSSILRFVKLFLPXXXXXXXXRVYVAYLKKGIAMRSRLEYEHLVEVMEQGV 219
           +RDH +ILRFV+L+ P        ++YV YLKK IA+R R+EYE++VE+MEQG+
Sbjct: 569 QRDHPTILRFVRLYSPLGMETEGLQLYVGYLKKVIALRGRMEYENVVELMEQGL 622


>gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
           salt-inducible-like protein (GB:AL021637) [Arabidopsis
           thaliana]
          Length = 991

 Score = 74.3 bits (181), Expect(2) = 1e-24
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 219 GGSEVNFVGCLTNLFRDIVLAVEENDEILRSLCGEDAIAYAI 344
           G  +VNFVGCLTNLF+DIV+A+EENDEILR LCGED +AYAI
Sbjct: 702 GLGQVNFVGCLTNLFKDIVMAIEENDEILRGLCGEDGVAYAI 743



 Score = 63.5 bits (153), Expect(2) = 1e-24
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = +1

Query: 58  RRDHSSILRFVKLFLPXXXXXXXXRVYVAYLKKGIAMRSRLEYEHLVEVMEQGV 219
           +RDH +ILRFV+L+ P        ++YV YLKK IA+R R+EYE++VE+MEQG+
Sbjct: 650 QRDHPTILRFVRLYSPLGMETEGLQLYVGYLKKVIALRGRMEYENVVELMEQGL 703


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