BLASTX nr result

ID: Coptis21_contig00007240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007240
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24673.3| unnamed protein product [Vitis vinifera]              248   2e-63
ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis ...   248   2e-63
ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|2...   248   2e-63
ref|XP_002330653.1| predicted protein [Populus trichocarpa] gi|2...   243   5e-62
gb|ABK93787.1| unknown [Populus trichocarpa]                          243   5e-62

>emb|CBI24673.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score =  248 bits (632), Expect = 2e-63
 Identities = 118/151 (78%), Positives = 138/151 (91%), Gaps = 3/151 (1%)
 Frame = -3

Query: 725 LCF--TLPLVITAQQ-LNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTEDS 555
           +CF   +PL  ++++ L++KECENLGF+GLALCSDCNT AEYVK++ELVSDC KCCTEDS
Sbjct: 1   MCFLVVVPLASSSREVLSSKECENLGFSGLALCSDCNTLAEYVKDQELVSDCLKCCTEDS 60

Query: 554 DDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVFNSPPKLVMLDNDG 375
           DDSMSKITYSGA+LEVC RKLVFYPEVVGFIEEEKD+FPSV++QY+FNSPPKL+MLD+DG
Sbjct: 61  DDSMSKITYSGAILEVCMRKLVFYPEVVGFIEEEKDKFPSVKVQYLFNSPPKLIMLDDDG 120

Query: 374 QYKETIRIDNWKREHLRQFLTEKVKRISSAI 282
           Q+KETIRIDNWKREH+ QFL EKVK  SSAI
Sbjct: 121 QHKETIRIDNWKREHILQFLREKVKPASSAI 151


>ref|XP_002273955.1| PREDICTED: 15 kDa selenoprotein-like [Vitis vinifera]
          Length = 165

 Score =  248 bits (632), Expect = 2e-63
 Identities = 118/151 (78%), Positives = 138/151 (91%), Gaps = 3/151 (1%)
 Frame = -3

Query: 725 LCF--TLPLVITAQQ-LNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTEDS 555
           +CF   +PL  ++++ L++KECENLGF+GLALCSDCNT AEYVK++ELVSDC KCCTEDS
Sbjct: 15  MCFLVVVPLASSSREVLSSKECENLGFSGLALCSDCNTLAEYVKDQELVSDCLKCCTEDS 74

Query: 554 DDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVFNSPPKLVMLDNDG 375
           DDSMSKITYSGA+LEVC RKLVFYPEVVGFIEEEKD+FPSV++QY+FNSPPKL+MLD+DG
Sbjct: 75  DDSMSKITYSGAILEVCMRKLVFYPEVVGFIEEEKDKFPSVKVQYLFNSPPKLIMLDDDG 134

Query: 374 QYKETIRIDNWKREHLRQFLTEKVKRISSAI 282
           Q+KETIRIDNWKREH+ QFL EKVK  SSAI
Sbjct: 135 QHKETIRIDNWKREHILQFLREKVKPASSAI 165


>ref|XP_002326051.1| predicted protein [Populus trichocarpa] gi|222862926|gb|EEF00433.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  248 bits (632), Expect = 2e-63
 Identities = 112/144 (77%), Positives = 134/144 (93%)
 Frame = -3

Query: 719 FTLPLVITAQQLNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTEDSDDSMS 540
           F LP+V + +QL+++ECE+LGFTGLALCSDCNT AEYVKN+ELVSDC KCCTEDSDDS+S
Sbjct: 6   FVLPIVKSKEQLSSRECEDLGFTGLALCSDCNTLAEYVKNQELVSDCLKCCTEDSDDSIS 65

Query: 539 KITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVFNSPPKLVMLDNDGQYKET 360
           KITYSGA++EVC RKLVFYPE+VGFIEEEKDQFP+V++QY+FNSPPKL+MLD++GQ+KET
Sbjct: 66  KITYSGAIIEVCMRKLVFYPEIVGFIEEEKDQFPTVKVQYLFNSPPKLIMLDDEGQHKET 125

Query: 359 IRIDNWKREHLRQFLTEKVKRISS 288
           IRIDNWKREH+ QFL EKVK  S+
Sbjct: 126 IRIDNWKREHMLQFLQEKVKPASA 149


>ref|XP_002330653.1| predicted protein [Populus trichocarpa] gi|222872257|gb|EEF09388.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  243 bits (619), Expect = 5e-62
 Identities = 110/152 (72%), Positives = 137/152 (90%)
 Frame = -3

Query: 740 VLKFVLCFTLPLVITAQQLNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTE 561
           +L  ++ F LP+V + +QL++ ECE+LGF+GLALCSDC+TF+EYVKN+ELVSDC KCCTE
Sbjct: 8   ILLLLVTFILPIVKSKEQLSSGECEDLGFSGLALCSDCHTFSEYVKNQELVSDCLKCCTE 67

Query: 560 DSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVFNSPPKLVMLDN 381
           DSDDS+SKITYSGA+LEVC RKLVFYPE+VGFIEEEKDQFP+ ++QY+FNSPPKL+MLD+
Sbjct: 68  DSDDSISKITYSGAILEVCMRKLVFYPEIVGFIEEEKDQFPTFKVQYLFNSPPKLIMLDD 127

Query: 380 DGQYKETIRIDNWKREHLRQFLTEKVKRISSA 285
            GQ+KETIRIDNWKREH+ Q+L EKVK  S++
Sbjct: 128 KGQHKETIRIDNWKREHMLQYLREKVKPTSAS 159


>gb|ABK93787.1| unknown [Populus trichocarpa]
          Length = 167

 Score =  243 bits (619), Expect = 5e-62
 Identities = 110/152 (72%), Positives = 137/152 (90%)
 Frame = -3

Query: 740 VLKFVLCFTLPLVITAQQLNTKECENLGFTGLALCSDCNTFAEYVKNEELVSDCRKCCTE 561
           +L  ++ F LP+V + +QL++ ECE+LGF+GLALCSDC+TF+EYVKN+ELVSDC KCCTE
Sbjct: 16  ILLLLVTFILPIVKSKEQLSSGECEDLGFSGLALCSDCHTFSEYVKNQELVSDCLKCCTE 75

Query: 560 DSDDSMSKITYSGAVLEVCSRKLVFYPEVVGFIEEEKDQFPSVRIQYVFNSPPKLVMLDN 381
           DSDDS+SKITYSGA+LEVC RKLVFYPE+VGFIEEEKDQFP+ ++QY+FNSPPKL+MLD+
Sbjct: 76  DSDDSISKITYSGAILEVCMRKLVFYPEIVGFIEEEKDQFPTFKVQYLFNSPPKLIMLDD 135

Query: 380 DGQYKETIRIDNWKREHLRQFLTEKVKRISSA 285
            GQ+KETIRIDNWKREH+ Q+L EKVK  S++
Sbjct: 136 KGQHKETIRIDNWKREHMLQYLREKVKPTSAS 167


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