BLASTX nr result
ID: Coptis21_contig00007239
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00007239
(3254 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera] 139 4e-30
ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243... 87 3e-14
gb|AAM62582.1| unknown [Arabidopsis thaliana] 82 7e-13
ref|NP_564042.1| Aminotransferase-like, plant mobile domain fami... 81 2e-12
ref|XP_002438028.1| hypothetical protein SORBIDRAFT_10g006880 [S... 79 8e-12
>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
Length = 689
Score = 139 bits (351), Expect = 4e-30
Identities = 113/393 (28%), Positives = 181/393 (46%), Gaps = 10/393 (2%)
Frame = -1
Query: 2003 PQRLNIVDHATLAPDPDKHVSCLYNTDGKMSSTRWRCAMPSIKDFWSHLVERGDEMEHV- 1827
PQ L TL DP KH+S + G++ + SI L + D+++ V
Sbjct: 22 PQNLVACQSPTLLKDPHKHIS-RHGLRGEILPKGLKTCGSSIA-----LTQWYDKLDPVV 75
Query: 1826 RARILGTPFGPLIS--CTSIRTDRPLIFALAERWWHTTHTFHFPCGEIGITPLDFTMLTG 1653
+ ++ FG IS C S R ++ + +LAERWW TT T HFP GE+G+TP DF+++TG
Sbjct: 76 KQKVDNAGFGRFISSLCPSSRAEKVRVISLAERWWDTTGTLHFPFGEVGMTPYDFSVITG 135
Query: 1652 LSVGEKKPVLFDASI---EDDFERLKTLLPSLFDSEGRLVPGNMDGRYILNSYIRDRFMH 1482
L +G KP+ ++A + EDD LK L S ++ G++ ++ ++ H
Sbjct: 136 LRIG-GKPIPYNAGVHRSEDDL--LKAL-----GSRPPVIRGSVSCSWLFENF------H 181
Query: 1481 RLDYEYCLEYEVHVLDLEPDSAEEDEFIRIFLLYFLGQVGFTSGKSGIRAGWLASLVDLA 1302
+ + E H R F+LY G F + + L +L D+
Sbjct: 182 NVVCNTDRDRECHT--------------RAFILYLFGCTMFGTLDCKVNLNSLPALEDVD 227
Query: 1301 NLEDFDWGGAFMAYLYIGLDVFVQTNEMGK--QCNGITWILQYWWYEYLVCLNPILKEDW 1128
+ ++DWGGA Y L + + GK + G+ + + W YEY L P LK D
Sbjct: 228 RIGEYDWGGA----AYAALCTHMNSVSRGKAHRLGGLWKVWEIWSYEYFSLLAPSLKVD- 282
Query: 1127 DKDLWPRPQGWAADGHARLRDEVHN--DLQAARFQIETKSVRSIFWSPWQGSHFENMHIC 954
D +PR W + + H DL+ R I ++ + W+PW
Sbjct: 283 DSMAFPRSLRWWGGSEFEMCPK-HRMVDLKNFREAINNLTIEMVNWNPWGEIEPTLPPEI 341
Query: 953 QHSSLMSLRRFILQAPDIRAWFLGDGVTMQTVG 855
+H+ +S RR + + P + WFLG+ ++MQT+G
Sbjct: 342 RHAKELSRRRILFEGPSGQFWFLGERLSMQTLG 374
>ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243242 [Vitis vinifera]
Length = 532
Score = 87.0 bits (214), Expect = 3e-14
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 6/283 (2%)
Frame = -1
Query: 1685 ITPLDFTMLTGLSVGEKKPVLFDASI---EDDFERLKTLLPSLFDSEGRLVPGNMDGRYI 1515
+TP DF+++TGL +G K P+ ++A + EDD LK L S ++ G++ ++
Sbjct: 1 MTPYDFSVITGLRIGGK-PIPYNAGVHRSEDDL--LKAL-----GSRPPVIRGSVSCSWL 52
Query: 1514 LNSYIRDRFMHRLDYEYCLEYEVHVLDLEPDSAEEDEFIRIFLLYFLGQVGFTSGKSGIR 1335
++ H + + E H R F+LY G F + +
Sbjct: 53 FENF------HNVVCNTDRDRECHT--------------RAFILYLFGCTMFGTLDCKVN 92
Query: 1334 AGWLASLVDLANLEDFDWGGAFMAYLYIGLDVFVQTNEMGK--QCNGITWILQYWWYEYL 1161
L +L D+ + ++DWGGA Y L + + GK + G+ + + W YEY
Sbjct: 93 LNSLPALEDVDRIGEYDWGGA----AYAALCTHMNSVSRGKAHRLGGLWKVWEIWSYEYF 148
Query: 1160 VCLNPILKEDWDKDLWPRPQGWAADGHARLRDEVHN-DLQAARFQIETKSVRSIFWSPWQ 984
L P LK D D +PR W + + DL+ R I ++ + W+PW
Sbjct: 149 SLLAPSLKVD-DSMAFPRSLRWWGGSEFEMCPKHRMVDLKNFREAINNLTIEMVNWNPWG 207
Query: 983 GSHFENMHICQHSSLMSLRRFILQAPDIRAWFLGDGVTMQTVG 855
+H+ +S RR + + P + WFLG+ ++MQT+G
Sbjct: 208 EIEPTLPPEIRHAKELSRRRILFEGPSGQFWFLGERLSMQTLG 250
>gb|AAM62582.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 82.4 bits (202), Expect = 7e-13
Identities = 90/362 (24%), Positives = 141/362 (38%), Gaps = 1/362 (0%)
Frame = -1
Query: 1961 DPDKHVSCLYNTDGKMSSTRWRCAMPSIKDFWSHLVERGDEMEHVRARILGTPFGPLISC 1782
+ DKHVS T + R + S+ W E+ + +E FG
Sbjct: 6 EQDKHVSSAILTGQERGVLRCQ-ERTSLLHHWKLTKEQIELVEKAG-------FGWFRLI 57
Query: 1781 TSIRTDRPLIFALAERWWHTTHTFHFPCGEIGITPLDFTMLTGLSVGEKKPVLFDASIED 1602
SI + LI AL ERW T+TFHFPCGE+ IT + +++ GL+V K V ED
Sbjct: 58 GSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVVGVKEKDED 117
Query: 1601 DFERLKTLLPSLFDSEGRLVPGNMDGRYILNSYIRDRFMHRLDYEYCLEYEVHVLDLEPD 1422
+ LL G+L G + G + ++++ F E E H
Sbjct: 118 PSQVCLKLL-------GKLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHT------ 164
Query: 1421 SAEEDEFIRIFLLYFLGQVGF-TSGKSGIRAGWLASLVDLANLEDFDWGGAFMAYLYIGL 1245
R +L+Y +G F T+ S I +L D ++ WG A +A+LY +
Sbjct: 165 --------RAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQI 216
Query: 1244 DVFVQTNEMGKQCNGITWILQYWWYEYLVCLNPILKEDWDKDLWPRPQGWAADGHARLRD 1065
Q ++ G +LQ W Y +L I + +P W +R +
Sbjct: 217 GNASQRSQ--SIIGGCLTLLQCWSYFHL----NIDRPKRTTRQFPLALLWKGRQQSRSK- 269
Query: 1064 EVHNDLQAARFQIETKSVRSIFWSPWQGSHFENMHICQHSSLMSLRRFILQAPDIRAWFL 885
NDL R ++ ++ W P++G + + L+ R L P + W
Sbjct: 270 ---NDLFKYRKALDDLDPSNVSWCPFEGDLDIVPQSFKDNLLLGRSRTKLIGPKVVEWHF 326
Query: 884 GD 879
D
Sbjct: 327 PD 328
>ref|NP_564042.1| Aminotransferase-like, plant mobile domain family protein
[Arabidopsis thaliana]
gi|9665070|gb|AAF97272.1|AC034106_15 Contains similarity
to a hypothetical protein At2g25010 gi|4559351 from
Arabidopsis thaliana chromosome II gb|AC006585
[Arabidopsis thaliana] gi|62320302|dbj|BAD94623.1|
hypothetical protein [Arabidopsis thaliana]
gi|332191532|gb|AEE29653.1| Aminotransferase-like, plant
mobile domain family protein [Arabidopsis thaliana]
Length = 478
Score = 81.3 bits (199), Expect = 2e-12
Identities = 77/301 (25%), Positives = 121/301 (40%), Gaps = 1/301 (0%)
Frame = -1
Query: 1778 SIRTDRPLIFALAERWWHTTHTFHFPCGEIGITPLDFTMLTGLSVGEKKPVLFDASIEDD 1599
SI + LI AL ERW T+TFHFPCGE+ IT + +++ GL+V K V ED
Sbjct: 59 SISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVVGVKEKDEDP 118
Query: 1598 FERLKTLLPSLFDSEGRLVPGNMDGRYILNSYIRDRFMHRLDYEYCLEYEVHVLDLEPDS 1419
+ LL G+L G + G + ++++ F E E H
Sbjct: 119 SQVCLRLL-------GKLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHT------- 164
Query: 1418 AEEDEFIRIFLLYFLGQVGF-TSGKSGIRAGWLASLVDLANLEDFDWGGAFMAYLYIGLD 1242
R +L+Y +G F T+ S I +L D ++ WG A +A+LY +
Sbjct: 165 -------RAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIG 217
Query: 1241 VFVQTNEMGKQCNGITWILQYWWYEYLVCLNPILKEDWDKDLWPRPQGWAADGHARLRDE 1062
Q ++ G +LQ W Y +L I + +P W +R +
Sbjct: 218 NASQRSQ--SIIGGCLTLLQCWSYFHL----NIDRPKRTTRQFPLALLWKGRQQSRSK-- 269
Query: 1061 VHNDLQAARFQIETKSVRSIFWSPWQGSHFENMHICQHSSLMSLRRFILQAPDIRAWFLG 882
NDL R ++ ++ W P++G + + L+ R L P + W
Sbjct: 270 --NDLFKYRKALDDLDPSNVSWCPFEGDLDIVPQSFKDNLLLGRSRTKLIGPKVVEWHFP 327
Query: 881 D 879
D
Sbjct: 328 D 328
>ref|XP_002438028.1| hypothetical protein SORBIDRAFT_10g006880 [Sorghum bicolor]
gi|241916251|gb|EER89395.1| hypothetical protein
SORBIDRAFT_10g006880 [Sorghum bicolor]
Length = 794
Score = 79.0 bits (193), Expect = 8e-12
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 7/267 (2%)
Frame = -1
Query: 1766 DRPLIFALAERWWHTTHTFHFPCGEIGITPLDFTMLTGLSVGEKKPVLFDASIEDDFERL 1587
D+ LI AL ERW TH+FH GEI +T D ML L + + +PV D +
Sbjct: 125 DKALITALVERWRPETHSFHLASGEITVTLQDVAMLFALPI-DGRPVCSTT----DHDYA 179
Query: 1586 KTLLPSL-FDSEGRLVPGNMDGRYILNSYIRDRFMHRLDYEYCLEYEVHVLDLEPDSAEE 1410
+ +L L D+ G +PG S++ +++ ++ YE L E D
Sbjct: 180 QVVLDCLGQDARGPAMPG--------KSFLHYKWLKKIFYE---------LPEEADDVTV 222
Query: 1409 DEFIRIFLLYFLGQVGFTSGKSGIRAGWLASLVDLANLEDFDWGGAFMAYLYIGLDVFVQ 1230
+ +R ++L L V F G + +L + DL+ + + WG A +A+LY L
Sbjct: 223 ERHVRAYILSLLCGVLFPDGTGRMSLIYLPLIADLSRVSTYSWGSAVLAFLYRSLCSVAS 282
Query: 1229 TNEMGKQCNGITWILQYWWYEYLVCLNPILKEDW------DKDLWPRPQGWAADGHARLR 1068
++ + K G +LQ W +E P+++ ++DL P W G
Sbjct: 283 SHNI-KNIGGSLLLLQLWSWERFHVGRPLVRSPLCTEIGIEQDLPPIGFRWV--GARTQS 339
Query: 1067 DEVHNDLQAARFQIETKSVRSIFWSPW 987
+ L+ R ++ + V + W P+
Sbjct: 340 ENATRCLKQYRDELNLQRVDQVKWEPY 366