BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007224
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510553.1| zinc finger protein, putative [Ricinus commu...   236   3e-60
ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   216   4e-54
ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   215   8e-54
ref|XP_002273623.1| PREDICTED: E3 ubiquitin-protein ligase CIP8 ...   207   2e-51
ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis t...   194   2e-47

>ref|XP_002510553.1| zinc finger protein, putative [Ricinus communis]
           gi|223551254|gb|EEF52740.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 358

 Score =  236 bits (603), Expect = 3e-60
 Identities = 110/151 (72%), Positives = 127/151 (84%)
 Frame = -3

Query: 713 FATRATSGRNRILDWSEILMGLEDHTMQFRVEIPEWDGYVGNPEDYVDAAGYEQLLQNLA 534
           FATRA SGRNRILDW+EILMGLED++++F +E+PE D Y+GNPEDYVDAAGYE LLQNLA
Sbjct: 184 FATRARSGRNRILDWAEILMGLEDNSIEFLLEVPETDRYIGNPEDYVDAAGYEALLQNLA 243

Query: 533 ELDGARKGAPPASKSAVLALKNVVIAVEEEGLMCAICKEGVPVGEKAKKMPCGHGYHGDC 354
           E D  R+GAPPASKS+V AL   VI +EE+  +CAICK+ V VGE   K+PC HGYHGDC
Sbjct: 244 ESDDGRRGAPPASKSSVSALPTAVITLEEQTRVCAICKDMVNVGETETKLPCDHGYHGDC 303

Query: 353 IDTWLGSRNTCPVCRFELPTDDPEYEEQRKK 261
           I  WLGSRN+CPVCRFELPTDD EYEE+RKK
Sbjct: 304 IVPWLGSRNSCPVCRFELPTDDTEYEEERKK 334


>ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform 1 [Glycine
           max] gi|356536437|ref|XP_003536744.1| PREDICTED: E3
           ubiquitin-protein ligase CIP8-like isoform 2 [Glycine
           max]
          Length = 333

 Score =  216 bits (550), Expect = 4e-54
 Identities = 103/149 (69%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
 Frame = -3

Query: 710 ATRATSGRNRILDWSEILMGLEDHTMQFRVEIPEWDGYVGNPEDYVDAAGYEQLLQNLAE 531
           ATR  S RNRILDW+EILMGLED++++FR+++PE D YVGNPEDYVDAA YE LL  LAE
Sbjct: 169 ATRTRSMRNRILDWAEILMGLEDNSIEFRLQLPESDRYVGNPEDYVDAAEYEALLHTLAE 228

Query: 530 LDGA-RKGAPPASKSAVLALKNVVIAVEEEGLMCAICKEGVPVGEKAKKMPCGHGYHGDC 354
            DG  R+GAPPASK+AV AL  V IA E E + CAICK+ + VG+ AK++PCGHGYHGDC
Sbjct: 229 SDGGGRRGAPPASKAAVEALPTVKIASESEAVACAICKDLLGVGDLAKRLPCGHGYHGDC 288

Query: 353 IDTWLGSRNTCPVCRFELPTDDPEYEEQR 267
           I  WL SRN+CPVCR+ELPTDD EYEE+R
Sbjct: 289 IVPWLSSRNSCPVCRYELPTDDKEYEEER 317


>ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Glycine max]
          Length = 337

 Score =  215 bits (548), Expect = 8e-54
 Identities = 103/149 (69%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
 Frame = -3

Query: 710 ATRATSGRNRILDWSEILMGLEDHTMQFRVEIPEWDGYVGNPEDYVDAAGYEQLLQNLAE 531
           ATR  S RNRILDW+EILMGLED++++FR+++PE D YVGNPEDYVDAA YE LLQ LAE
Sbjct: 166 ATRTRSMRNRILDWAEILMGLEDNSIEFRLQLPESDRYVGNPEDYVDAAEYEALLQTLAE 225

Query: 530 LDGA-RKGAPPASKSAVLALKNVVIAVEEEGLMCAICKEGVPVGEKAKKMPCGHGYHGDC 354
            DG  R+GAPPASK+A+ AL  V IA E E + CAICK+ + VG+ AK++PCGH YHGDC
Sbjct: 226 SDGGGRRGAPPASKAALEALPTVKIASESEAVACAICKDLLGVGDAAKRLPCGHRYHGDC 285

Query: 353 IDTWLGSRNTCPVCRFELPTDDPEYEEQR 267
           I  WL SRN+CPVCRFELPTDD EYEE+R
Sbjct: 286 IVPWLSSRNSCPVCRFELPTDDKEYEEER 314


>ref|XP_002273623.1| PREDICTED: E3 ubiquitin-protein ligase CIP8 isoform 1 [Vitis
           vinifera] gi|359492263|ref|XP_003634390.1| PREDICTED: E3
           ubiquitin-protein ligase CIP8 isoform 2 [Vitis vinifera]
           gi|147826680|emb|CAN66109.1| hypothetical protein
           VITISV_007725 [Vitis vinifera]
          Length = 334

 Score =  207 bits (528), Expect = 2e-51
 Identities = 100/148 (67%), Positives = 119/148 (80%), Gaps = 1/148 (0%)
 Frame = -3

Query: 701 ATSGRNRILDWSEILMGLEDHTMQFRVEIPEWDGYVGNPEDYVDAAGYEQLLQNLAELDG 522
           A+   N +LDW+ ILM  ED T++F  ++PE +GY GNPEDYVDAAGYE+LLQNLAE DG
Sbjct: 168 ASGNPNAVLDWA-ILMASEDSTIEFHFQMPEPEGYTGNPEDYVDAAGYEELLQNLAESDG 226

Query: 521 A-RKGAPPASKSAVLALKNVVIAVEEEGLMCAICKEGVPVGEKAKKMPCGHGYHGDCIDT 345
           A R+GAPPASKSA+ AL +V I  EE+ L CAICK+ V + E A+K+PCGHGYHGDCI  
Sbjct: 227 AARRGAPPASKSAISALPSVEIKSEEQVLACAICKDVVSICEIARKLPCGHGYHGDCIVP 286

Query: 344 WLGSRNTCPVCRFELPTDDPEYEEQRKK 261
           WL SRN+CPVCRFELPTDD EYEE+RKK
Sbjct: 287 WLNSRNSCPVCRFELPTDDSEYEEERKK 314


>ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana]
           gi|61211690|sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3
           ubiquitin-protein ligase CIP8; AltName:
           Full=COP1-interacting protein 8
           gi|5929906|gb|AAD56636.1|AF162150_1 COP1-interacting
           protein CIP8 [Arabidopsis thaliana]
           gi|8843756|dbj|BAA97304.1| COP1-interacting protein CIP8
           [Arabidopsis thaliana] gi|19698865|gb|AAL91168.1|
           COP1-interacting protein CIP8 [Arabidopsis thaliana]
           gi|30984560|gb|AAP42743.1| At5g64920 [Arabidopsis
           thaliana] gi|111146876|gb|ABH07378.1| COP1-interacting
           protein 8 [Arabidopsis thaliana]
           gi|332010587|gb|AED97970.1| E3 ubiquitin-protein ligase
           CIP8 [Arabidopsis thaliana]
          Length = 334

 Score =  194 bits (492), Expect = 2e-47
 Identities = 94/156 (60%), Positives = 122/156 (78%), Gaps = 7/156 (4%)
 Frame = -3

Query: 707 TRATSGRNRILDWSEILMGLEDHTMQFRVEIPEWDGYVGNPEDYVD-AAGYEQLLQNLAE 531
           T++ +GRNRILDW+EILMG+ED++++FR+E    D Y GNP DY+D AAGYE LLQNLAE
Sbjct: 162 TQSRTGRNRILDWAEILMGIEDNSIEFRMES---DRYAGNPADYIDDAAGYEALLQNLAE 218

Query: 530 LDGA----RKGAPPASKSAVLALKNVVIAVEEEGLM--CAICKEGVPVGEKAKKMPCGHG 369
            DG     R+GAPPA+KSA+ AL+   ++  E  ++  CA+CK+G+ +GE  KK+PCGH 
Sbjct: 219 GDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHC 278

Query: 368 YHGDCIDTWLGSRNTCPVCRFELPTDDPEYEEQRKK 261
           YHGDCI  WLG+RN+CPVCRF+L TDD EYEE+RKK
Sbjct: 279 YHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKK 314