BLASTX nr result

ID: Coptis21_contig00007220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007220
         (1468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265739.1| PREDICTED: pathogenesis-related genes transc...   186   2e-44
ref|XP_002325634.1| AP2/ERF domain-containing transcription fact...   163   9e-38
ref|NP_001233991.1| pathogenesis-related genes transcriptional a...   158   3e-36
ref|XP_002319978.1| AP2/ERF domain-containing transcription fact...   155   3e-35
gb|AAC14323.1| TSI1 [Nicotiana tabacum]                               155   3e-35

>ref|XP_002265739.1| PREDICTED: pathogenesis-related genes transcriptional activator PTI6
            [Vitis vinifera]
          Length = 285

 Score =  186 bits (471), Expect = 2e-44
 Identities = 119/262 (45%), Positives = 152/262 (58%), Gaps = 17/262 (6%)
 Frame = +3

Query: 414  MTISTPVKFSEHVLTTTKLVHHQKS----------SKIRQKVVRIIXXXXXXXXXXXXXX 563
            M I   VKFSEHV+TT+K +   +S           ++R +VVRII              
Sbjct: 15   MPIRPAVKFSEHVVTTSKHMQELESVSASECLSGRRRVRHRVVRIIHTDGDATDSSSD-- 72

Query: 564  EEGKFVRRVRRHVREIDIKLEQQXXXXXXXXXXXXXXXMIKLPVPTSKIEKQEQRKKYRG 743
            +E + V+RV+RHV EI ++   +               +++LP   S      +RKK+RG
Sbjct: 73   DEVELVQRVKRHVTEISLQPSVESPQKEPTKKR-----VLRLPESEST-----RRKKFRG 122

Query: 744  VRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFPT---TP 914
            VRQRPWGRWAAEIRDPT RKRLWLGT++T EEAA+ YD AA+ LKG NA+TNFP+   T 
Sbjct: 123  VRQRPWGRWAAEIRDPTRRKRLWLGTYDTPEEAARVYDKAAVSLKGPNAVTNFPSVVKTE 182

Query: 915  DHLHFYHSKSGS---DQVSVKSPTSVLN-GDSFPFSPFSYGDADMFGFDFDLPLTLPDIE 1082
                   S+S +     V+  SPTSVL   +  PF+ F Y D D FGFDFD+PLTLPDI 
Sbjct: 183  SVATAGQSQSETCSLPSVTASSPTSVLRYNEEAPFNGFGYCDVDAFGFDFDVPLTLPDIF 242

Query: 1083 LPKRYAVGEEEFGEFDVDYFSV 1148
              K   + E+EFGEFD D F V
Sbjct: 243  SNKH--LEEDEFGEFDPDDFLV 262


>ref|XP_002325634.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222862509|gb|EEF00016.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 313

 Score =  163 bits (413), Expect = 9e-38
 Identities = 116/307 (37%), Positives = 149/307 (48%), Gaps = 68/307 (22%)
 Frame = +3

Query: 414  MTISTPVKFSEHVLTTTKLVHHQK----SSKIR-QKVVRIIXXXXXXXXXXXXXXEEG-- 572
            M++ + VKF+EHV  T KL+ +Q+    SS+IR Q++VRII              EE   
Sbjct: 1    MSVQSKVKFTEHVFATKKLIKNQQQQHPSSRIRGQRLVRIIHTDPDATDSSSDEGEEQEQ 60

Query: 573  --KFVRRVRRHVREIDIKLEQQXXXXXXXXXXXXXXX----MIKLPVPTSKIEKQEQRKK 734
              +FVRRV+R V EI + LEQ+                     K P     +    +RK 
Sbjct: 61   ERRFVRRVKRQVSEIRL-LEQETTAPAAPSSRTSNDDHRDPTRKRPSSRLPVSDVTRRKN 119

Query: 735  YRGVRQRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFPT-- 908
            +RGVRQRPWG+WAAEIRDPT RKR+WLGTFNTAEEAA  YD AA+ LKG +A+TNFPT  
Sbjct: 120  FRGVRQRPWGKWAAEIRDPTRRKRVWLGTFNTAEEAATVYDRAAVKLKGPDAVTNFPTKS 179

Query: 909  -------------------------------TPDHLHFYHSKSGSDQV------------ 959
                                           +P  +  Y   +  D V            
Sbjct: 180  VLTVRANVDGPSDFQCESCDSPSSSGVNVMPSPTSVLRYEELTPFDPVLTEKAKVIDDHR 239

Query: 960  ---------SVKSPTSVLNGDSF-PFSPFSYGDADMFGFDFDLPLTLPDIELPKRYAVGE 1109
                     S+ SPTSVL  +   PF   +YGD D FGF  D+P  LPD+  P ++ V E
Sbjct: 240  ESCESPLRLSMTSPTSVLRYEELTPFDSLAYGDVDAFGFKIDVPFGLPDLMFPGKF-VDE 298

Query: 1110 EEFGEFD 1130
            EEF + D
Sbjct: 299  EEFVDLD 305


>ref|NP_001233991.1| pathogenesis-related genes transcriptional activator PTI6 [Solanum
            lycopersicum] gi|7531181|sp|O04682.1|PTI6_SOLLC RecName:
            Full=Pathogenesis-related genes transcriptional activator
            PTI6; AltName: Full=PTO-interacting protein 6
            gi|2213785|gb|AAC49741.1| Pti6 [Solanum lycopersicum]
          Length = 248

 Score =  158 bits (400), Expect = 3e-36
 Identities = 103/255 (40%), Positives = 144/255 (56%), Gaps = 16/255 (6%)
 Frame = +3

Query: 432  VKFSEHVLTTTKLV---HHQKSSKIRQKVVRIIXXXXXXXXXXXXXXEEGK-FVRRVRRH 599
            +KF++H++TT K V   H++KS+   Q+VVRII              +EG+  VRRV+RH
Sbjct: 9    IKFTQHIVTTNKHVFSEHNEKSNSELQRVVRIILTDADATDSSD---DEGRNTVRRVKRH 65

Query: 600  VREIDIKLEQQXXXXXXXXXXXXXXXMIKLPVPTSKIEKQEQRKKYRGVRQRPWGRWAAE 779
            V EI++    +                     P S + +   RKK+RGVRQRPWGRWAAE
Sbjct: 66   VTEINLMPSTKSIGDRKRRSVS----------PDSDVTR---RKKFRGVRQRPWGRWAAE 112

Query: 780  IRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFP-TTPDHLHFYHSKSGSDQ 956
            IRDPT  KR+WLGT++T EEAA  YD AA+ LKG +A+TNFP +T   +    +++ ++ 
Sbjct: 113  IRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEVTVTVTETETES 172

Query: 957  VS----------VKSPTSVL-NGDSFPFSPFSYGDADMFGFDFDLPLTLPDIELPKRYAV 1103
            V+            SPTSVL + D  PF    + + D FGFD D    LPD  + ++Y  
Sbjct: 173  VADGGDKSENDVALSPTSVLCDNDFAPFDNLGFCEVDAFGFDVDSLFRLPDFAMTEKYY- 231

Query: 1104 GEEEFGEFDVDYFSV 1148
              +EFGEFD D F++
Sbjct: 232  -GDEFGEFDFDDFAL 245


>ref|XP_002319978.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222858354|gb|EEE95901.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 313

 Score =  155 bits (392), Expect = 3e-35
 Identities = 108/306 (35%), Positives = 149/306 (48%), Gaps = 67/306 (21%)
 Frame = +3

Query: 414  MTISTPVKFSEHVLTTTKLVHHQK---SSKIRQKVVRIIXXXXXXXXXXXXXXEEG---K 575
            M++   VKF+EHV  T+KL+ +Q+   SS+ RQ++VRII              EE    K
Sbjct: 1    MSVQPKVKFTEHVFITSKLIENQQLHPSSRTRQRLVRIIHTDPDATDSSSDEEEEEQERK 60

Query: 576  FVRRVRRHVREIDIKLEQQXXXXXXXXXXXXXXXMIKLPVPTSKIEKQE--QRKKYRGVR 749
            +V+RV+R V EI +  ++                  +   P+S++   +  ++KK+RGVR
Sbjct: 61   YVKRVKRQVSEISLLEQETTAPAAPSSTTSNDDQEPRRKRPSSRLPLPDVSRQKKFRGVR 120

Query: 750  QRPWGRWAAEIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFPTTPDHLHF 929
            QRPWG+W+AEIRDPT RKR+WLGTF+TAEEAA  YD AA+ LKG +A+TNFPT       
Sbjct: 121  QRPWGKWSAEIRDPTRRKRVWLGTFDTAEEAATVYDRAALKLKGPDAVTNFPTNSVITEK 180

Query: 930  YHSKSGSDQV------------------------------------------------SV 965
             H  SGS  V                                                S 
Sbjct: 181  AHVNSGSSDVKCESRESPSIRGTANVMASPALVLRYVDLTPSDAVLTEKAKVVDGQRESC 240

Query: 966  KSPTSVLNGDSFP--------FSPF---SYGDADMFGFDFDLPLTLPDIELPKRYAVGEE 1112
            +SP S ++  S P         SPF    YGD D FGF+ D+PL+LP+  L   +   +E
Sbjct: 241  ESPLSGVHDMSSPTSVLPYEELSPFDSLGYGDVDAFGFEIDVPLSLPNSMLSGNF-FDKE 299

Query: 1113 EFGEFD 1130
            EF + D
Sbjct: 300  EFVDLD 305


>gb|AAC14323.1| TSI1 [Nicotiana tabacum]
          Length = 251

 Score =  155 bits (391), Expect = 3e-35
 Identities = 104/252 (41%), Positives = 135/252 (53%), Gaps = 13/252 (5%)
 Frame = +3

Query: 432  VKFSEHVLTTTKLVHHQKS-----SKIRQKVVRIIXXXXXXXXXXXXXXEEGKFVRRVRR 596
            VKFS+H++T  K V  Q       SK  Q+VVRII              ++   VRRV+R
Sbjct: 16   VKFSQHIVTKNKHVPEQNENSNFHSKFLQRVVRIILTDADATDSSDDEGQDT--VRRVKR 73

Query: 597  HVREIDIKLEQQXXXXXXXXXXXXXXXMIKLPVPTSKIEKQEQRKKYRGVRQRPWGRWAA 776
            HV EI++                      +L  P + + +   RKK+RGVRQRPWGRWAA
Sbjct: 74   HVTEINLMPSPNLICEKKR----------RLVSPDTDVTR---RKKFRGVRQRPWGRWAA 120

Query: 777  EIRDPTLRKRLWLGTFNTAEEAAKSYDNAAIMLKGSNAITNFP-------TTPDHLHFYH 935
            EIRDPT  KR+WLGT++T EEAA  YD AA+ LKG +A+TNFP       T  + +    
Sbjct: 121  EIRDPTRGKRVWLGTYDTPEEAAIVYDAAAVKLKGPDAVTNFPKVLTADITEMESVTDRG 180

Query: 936  SKSGSDQVSVKSPTSVLNGDSF-PFSPFSYGDADMFGFDFDLPLTLPDIELPKRYAVGEE 1112
             KS +D     SPTSVL  D F P     + + D FGFD D    LP+  L ++Y    +
Sbjct: 181  EKSEND--FALSPTSVLRNDDFTPSDDLGFCEVDAFGFDVDSLFRLPEFGLSEKYY--GD 236

Query: 1113 EFGEFDVDYFSV 1148
            EFGEFD D F++
Sbjct: 237  EFGEFDFDDFAL 248


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