BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007218
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ...   273   1e-71
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l...   273   2e-71
ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-l...   273   2e-71
gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like pr...   272   2e-71
ref|XP_002322717.1| predicted protein [Populus trichocarpa] gi|2...   269   2e-70

>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
           gi|223528261|gb|EEF30313.1| exosome complex exonuclease
           rrp43, putative [Ricinus communis]
          Length = 303

 Score =  273 bits (699), Expect = 1e-71
 Identities = 136/184 (73%), Positives = 154/184 (83%)
 Frame = -3

Query: 552 DASGDLAGEMEVDAFRRLFPLRFYERHLLESIRPDARPLGKARDTTVALGAVASADGSAL 373
           + SGDL+ EME DAFRRLFPL F+ERHL ESIRPD R LG+ARDTT+ALGAV SADGSA+
Sbjct: 5   NVSGDLSTEMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTTLALGAVVSADGSAI 64

Query: 372 VKIGHTTMLAAIKMEVMTPASESPGEGCIAIDFHMPPICSPLIRPGRPAEAAPVLSKQLT 193
            KIG TTM+AAIKMEVMTP+SESP EGCIAIDFHMPPICSPL+RPGRPAEAAPV+SKQL+
Sbjct: 65  AKIGSTTMMAAIKMEVMTPSSESPDEGCIAIDFHMPPICSPLVRPGRPAEAAPVVSKQLS 124

Query: 192 DIILSSEMVDLKELCLIPGKAAWMAYLDIYCXXXXXXXXXXXXLSAVAAFSHLCIPAVSV 13
           D I+SS M+DLKEL L+ GKAAWMAYLDIYC             SAVAAF++L IP VS+
Sbjct: 125 DTIMSSAMIDLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALFSAVAAFTNLQIPIVSL 184

Query: 12  NDEG 1
           ND+G
Sbjct: 185 NDDG 188


>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
           gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
           complex component RRP43-like [Cucumis sativus]
          Length = 304

 Score =  273 bits (697), Expect = 2e-71
 Identities = 134/183 (73%), Positives = 154/183 (84%)
 Frame = -3

Query: 549 ASGDLAGEMEVDAFRRLFPLRFYERHLLESIRPDARPLGKARDTTVALGAVASADGSALV 370
           ASGDL+ +MEVDAFRRLFP++FYERHL ESIRPD R LGKARDTT+ALG V+SA+GSAL 
Sbjct: 7   ASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALA 66

Query: 369 KIGHTTMLAAIKMEVMTPASESPGEGCIAIDFHMPPICSPLIRPGRPAEAAPVLSKQLTD 190
           KIG TTMLAAIKMEVMTP+ ESP EGCIA+DFHMPP+CSP++RPGRPAEAAPV+SKQL+D
Sbjct: 67  KIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVISKQLSD 126

Query: 189 IILSSEMVDLKELCLIPGKAAWMAYLDIYCXXXXXXXXXXXXLSAVAAFSHLCIPAVSVN 10
            I SS M+DL+EL L+ GKAAWMAYLDIYC            LSA AAFSHL IP V++N
Sbjct: 127 TISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALN 186

Query: 9   DEG 1
           D+G
Sbjct: 187 DDG 189


>ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
          Length = 299

 Score =  273 bits (697), Expect = 2e-71
 Identities = 135/184 (73%), Positives = 156/184 (84%)
 Frame = -3

Query: 552 DASGDLAGEMEVDAFRRLFPLRFYERHLLESIRPDARPLGKARDTTVALGAVASADGSAL 373
           +AS DL+ EMEVDAFRRLFPLR++ERHL ESIRPD RPLGKAR+T++ LGAVASA+GSAL
Sbjct: 5   NASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSAL 64

Query: 372 VKIGHTTMLAAIKMEVMTPASESPGEGCIAIDFHMPPICSPLIRPGRPAEAAPVLSKQLT 193
           VKIG TTML AIKMEVMTP+ ESP EGC+AIDFHMPPICSP++RPGRPAEA+PV+SKQL+
Sbjct: 65  VKIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLS 124

Query: 192 DIILSSEMVDLKELCLIPGKAAWMAYLDIYCXXXXXXXXXXXXLSAVAAFSHLCIPAVSV 13
           D I SS M+DLKEL L+ GKAAWMAYLDIYC            +SAVAA SHL IPAV++
Sbjct: 125 DTISSSRMIDLKELSLVGGKAAWMAYLDIYCLDADGALFDAALISAVAALSHLQIPAVAM 184

Query: 12  NDEG 1
           ND+G
Sbjct: 185 NDDG 188


>gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum
           tuberosum]
          Length = 314

 Score =  272 bits (696), Expect = 2e-71
 Identities = 138/184 (75%), Positives = 153/184 (83%)
 Frame = -3

Query: 552 DASGDLAGEMEVDAFRRLFPLRFYERHLLESIRPDARPLGKARDTTVALGAVASADGSAL 373
           + S DL+ EMEVDAFRRLFPLR++E HLL+S+RPDAR LG ARDTT+ALGAVASADGSAL
Sbjct: 5   NGSSDLSSEMEVDAFRRLFPLRYHEHHLLKSVRPDARKLGSARDTTLALGAVASADGSAL 64

Query: 372 VKIGHTTMLAAIKMEVMTPASESPGEGCIAIDFHMPPICSPLIRPGRPAEAAPVLSKQLT 193
            KIG TTMLAAIKMEVMTP  E P EG IAI+FHMPPICSPL+RPGRPAEAA V+SKQL+
Sbjct: 65  AKIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVISKQLS 124

Query: 192 DIILSSEMVDLKELCLIPGKAAWMAYLDIYCXXXXXXXXXXXXLSAVAAFSHLCIPAVSV 13
           D ILSS M+DLKELCL+ GKAAWMAYLDIYC            LSAVAAFSHL IP VS+
Sbjct: 125 DTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLNIPVVSL 184

Query: 12  NDEG 1
           ND+G
Sbjct: 185 NDDG 188


>ref|XP_002322717.1| predicted protein [Populus trichocarpa] gi|222867347|gb|EEF04478.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  269 bits (688), Expect = 2e-70
 Identities = 142/204 (69%), Positives = 160/204 (78%), Gaps = 20/204 (9%)
 Frame = -3

Query: 552 DASGDLAGEMEVDAFRRLFPLRFYERHLLESIRPDARPLGKARDTTVALGAVASADGSAL 373
           DASGDL+ EMEVDAFR LFPLR++ERHL ESIRPDARPLG+ARDTT+ALGAVASA GSAL
Sbjct: 5   DASGDLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSAL 64

Query: 372 VKIGHTTMLAAIKMEVMTPASESPGEGCIAIDFHMPPICSPLIRPGRPAEAAPVLSKQLT 193
            KIG TTMLAAIKMEVMTP++ESP EGCIAIDFHMPPICSP++RPGRPAEAAPV+SKQL+
Sbjct: 65  AKIGSTTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLS 124

Query: 192 D-----------------IILSSE---MVDLKELCLIPGKAAWMAYLDIYCXXXXXXXXX 73
           D                 +IL +E   M++LKEL L+ GKAAWMAYLDIYC         
Sbjct: 125 DTISRQVKFSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYCLDADGALFD 184

Query: 72  XXXLSAVAAFSHLCIPAVSVNDEG 1
              LSAVAAFSHL IP VS+ND+G
Sbjct: 185 AALLSAVAAFSHLQIPIVSLNDDG 208