BLASTX nr result

ID: Coptis21_contig00007183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007183
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328279.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41
ref|XP_004151367.1| PREDICTED: uncharacterized protein LOC101223...   172   1e-40
emb|CAN78386.1| hypothetical protein VITISV_017367 [Vitis vinifera]   169   8e-40
ref|XP_002283053.1| PREDICTED: uncharacterized protein LOC100243...   169   1e-39
emb|CBI37729.3| unnamed protein product [Vitis vinifera]              168   2e-39

>ref|XP_002328279.1| predicted protein [Populus trichocarpa] gi|222837794|gb|EEE76159.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  174 bits (441), Expect = 3e-41
 Identities = 87/155 (56%), Positives = 111/155 (71%), Gaps = 3/155 (1%)
 Frame = +3

Query: 147 MSSLKKSFFPSRPLKDSLPLSQ--NSTTDQXXXXXXXXXXXXVKIQPISSPATSWALRKS 320
           MSS+ +SF        +LP+SQ  +S                +KIQPISSPAT WA ++S
Sbjct: 1   MSSIVQSFQKRNHGAAALPVSQTHDSKDRGAAALRRRISSLSLKIQPISSPATQWAFQRS 60

Query: 321 KSMSSLGESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYK 500
           KS+S++GE AG+SIRKWW WGW+WIL+KKP FAQDLEMNEEE+ +LG H+KGSWRHV YK
Sbjct: 61  KSVSAMGEYAGSSIRKWWGWGWSWILSKKPPFAQDLEMNEEETRVLGCHNKGSWRHVFYK 120

Query: 501 VKSEFRRLVGS-NPVGAPNGFRYDSFSYAQNFDDG 602
           V+ E R+LV S + VG P  +RYDSF+Y++NFD G
Sbjct: 121 VRYEVRKLVRSDDKVGLPQTYRYDSFNYSKNFDSG 155


>ref|XP_004151367.1| PREDICTED: uncharacterized protein LOC101223147 [Cucumis sativus]
           gi|449467872|ref|XP_004151646.1| PREDICTED:
           uncharacterized protein LOC101213314 [Cucumis sativus]
           gi|449524571|ref|XP_004169295.1| PREDICTED:
           uncharacterized LOC101223147 [Cucumis sativus]
          Length = 159

 Score =  172 bits (436), Expect = 1e-40
 Identities = 85/147 (57%), Positives = 110/147 (74%), Gaps = 4/147 (2%)
 Frame = +3

Query: 162 KSFFPSRPLKDSLPLSQ-NSTTDQXXXXXXXXXXXXVKIQPISSPATSWALRKSKSMSSL 338
           +SF PSRPL D+LPLS  +S +DQ            ++IQPISSPAT+WA+RKSKSMSS 
Sbjct: 12  RSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLS--LRIQPISSPATAWAIRKSKSMSSF 69

Query: 339 GESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYKVKSEFR 518
           G+ AG+S+RKWWDWGWAWIL++KP FA+DLEMNEEES +LGS ++GSW+HV +K +SE R
Sbjct: 70  GDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHVFFKFRSEIR 129

Query: 519 RLVGSN---PVGAPNGFRYDSFSYAQN 590
           +L+GS+   P   PN   Y SF++  N
Sbjct: 130 KLIGSDVALPQTTPN---YRSFNFPNN 153


>emb|CAN78386.1| hypothetical protein VITISV_017367 [Vitis vinifera]
          Length = 151

 Score =  169 bits (429), Expect = 8e-40
 Identities = 84/152 (55%), Positives = 106/152 (69%)
 Frame = +3

Query: 147 MSSLKKSFFPSRPLKDSLPLSQNSTTDQXXXXXXXXXXXXVKIQPISSPATSWALRKSKS 326
           MSS+ +SF       + LP+S   + +Q             KIQPI S  +SW   +SKS
Sbjct: 1   MSSIFQSF-----KTNGLPVSHGDSKEQGLRRRLSSFSF--KIQPICSTPSSWRFPRSKS 53

Query: 327 MSSLGESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYKVK 506
           + S+GE  G+S+RKWWD GWAWIL++KPTFA+DLEMNEEE+ +LG H+KGSWRHV YKV+
Sbjct: 54  LPSMGEFGGSSMRKWWDLGWAWILSRKPTFAKDLEMNEEETVILGCHNKGSWRHVFYKVR 113

Query: 507 SEFRRLVGSNPVGAPNGFRYDSFSYAQNFDDG 602
           SE RRLVGS+ VG P   RYDS+SY+QNFD G
Sbjct: 114 SELRRLVGSDRVGLPQTCRYDSYSYSQNFDQG 145


>ref|XP_002283053.1| PREDICTED: uncharacterized protein LOC100243457 [Vitis vinifera]
          Length = 151

 Score =  169 bits (427), Expect = 1e-39
 Identities = 84/152 (55%), Positives = 106/152 (69%)
 Frame = +3

Query: 147 MSSLKKSFFPSRPLKDSLPLSQNSTTDQXXXXXXXXXXXXVKIQPISSPATSWALRKSKS 326
           MSS+ +SF       + LP+S   + +Q             KIQPI S  +SW   +SKS
Sbjct: 1   MSSIFQSF-----KANGLPVSHAESKEQGLRRRLSSFSF--KIQPICSTPSSWRFPRSKS 53

Query: 327 MSSLGESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYKVK 506
           + S+GE  G+S+RKWWD GWAWIL++KPTFA+DLEMNEEE+ +LG H+KGSWRHV YKV+
Sbjct: 54  LPSMGEFGGSSMRKWWDLGWAWILSRKPTFAKDLEMNEEETVILGCHNKGSWRHVFYKVR 113

Query: 507 SEFRRLVGSNPVGAPNGFRYDSFSYAQNFDDG 602
           SE RRLVGS+ VG P   RYDS+SY+QNFD G
Sbjct: 114 SELRRLVGSDRVGLPQTCRYDSYSYSQNFDQG 145


>emb|CBI37729.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score =  168 bits (425), Expect = 2e-39
 Identities = 75/111 (67%), Positives = 91/111 (81%)
 Frame = +3

Query: 270 KIQPISSPATSWALRKSKSMSSLGESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEES 449
           KIQPI S  +SW   +SKS+ S+GE  G+S+RKWWD GWAWIL++KPTFA+DLEMNEEE+
Sbjct: 45  KIQPICSTPSSWRFPRSKSLPSMGEFGGSSMRKWWDLGWAWILSRKPTFAKDLEMNEEET 104

Query: 450 AMLGSHSKGSWRHVLYKVKSEFRRLVGSNPVGAPNGFRYDSFSYAQNFDDG 602
            +LG H+KGSWRHV YKV+SE RRLVGS+ VG P   RYDS+SY+QNFD G
Sbjct: 105 VILGCHNKGSWRHVFYKVRSELRRLVGSDRVGLPQTCRYDSYSYSQNFDQG 155


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