BLASTX nr result

ID: Coptis21_contig00007176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007176
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518967.1| conserved hypothetical protein [Ricinus comm...   107   1e-21
ref|XP_002276903.2| PREDICTED: transmembrane protein 120 homolog...   103   1e-20
emb|CBI34643.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002298988.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002317646.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19

>ref|XP_002518967.1| conserved hypothetical protein [Ricinus communis]
           gi|223541954|gb|EEF43500.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 360

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/111 (54%), Positives = 77/111 (69%)
 Frame = +3

Query: 3   ASSFISKSTAEEQSLRQRALSINSNIQKLRSSVPHGQKVPLSLILHACLPNNNSFSFIIL 182
           A+S IS+ST +EQSLRQRALS+ S+I++ RS             L   L + N     + 
Sbjct: 31  AASLISRSTNDEQSLRQRALSLESSIRRCRS-------------LFDSLLSRNLIHPKLA 77

Query: 183 PKLDEQLFRAKCILNDGDAASFLPNKSHGRFLKMFLGPINVRATRKDVQLK 335
            KLDE L RA+C++ DGDAA+FLP+K+ G FLKMFLGPINVRA+RKDVQLK
Sbjct: 78  DKLDEDLQRARCMMVDGDAAAFLPSKAQGGFLKMFLGPINVRASRKDVQLK 128


>ref|XP_002276903.2| PREDICTED: transmembrane protein 120 homolog isoform 1 [Vitis
           vinifera]
          Length = 371

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/111 (53%), Positives = 73/111 (65%)
 Frame = +3

Query: 3   ASSFISKSTAEEQSLRQRALSINSNIQKLRSSVPHGQKVPLSLILHACLPNNNSFSFIIL 182
           ASS IS+++ EEQ+LR+ ALS++SNI +LRS +               L  N      + 
Sbjct: 32  ASSHISRTSVEEQALRKSALSLDSNIHRLRSLIDS-------------LHRNKILDPKLA 78

Query: 183 PKLDEQLFRAKCILNDGDAASFLPNKSHGRFLKMFLGPINVRATRKDVQLK 335
            KLDE L RA+CIL DGDA+SFLP  + G FL+MFLGPINV ATRKDVQLK
Sbjct: 79  DKLDEDLQRARCILVDGDASSFLPGNAQGGFLRMFLGPINVHATRKDVQLK 129


>emb|CBI34643.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/111 (53%), Positives = 73/111 (65%)
 Frame = +3

Query: 3   ASSFISKSTAEEQSLRQRALSINSNIQKLRSSVPHGQKVPLSLILHACLPNNNSFSFIIL 182
           ASS IS+++ EEQ+LR+ ALS++SNI +LRS +               L  N      + 
Sbjct: 32  ASSHISRTSVEEQALRKSALSLDSNIHRLRSLIDS-------------LHRNKILDPKLA 78

Query: 183 PKLDEQLFRAKCILNDGDAASFLPNKSHGRFLKMFLGPINVRATRKDVQLK 335
            KLDE L RA+CIL DGDA+SFLP  + G FL+MFLGPINV ATRKDVQLK
Sbjct: 79  DKLDEDLQRARCILVDGDASSFLPGNAQGGFLRMFLGPINVHATRKDVQLK 129


>ref|XP_002298988.1| predicted protein [Populus trichocarpa] gi|222846246|gb|EEE83793.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/111 (50%), Positives = 75/111 (67%)
 Frame = +3

Query: 3   ASSFISKSTAEEQSLRQRALSINSNIQKLRSSVPHGQKVPLSLILHACLPNNNSFSFIIL 182
           A+S I+KST +EQS+RQ+ALS+ S+I++  S                 L  +N  +  + 
Sbjct: 21  AASLIAKSTHDEQSVRQKALSLESSIRRCSS----------------LLDRSNHLAPKLA 64

Query: 183 PKLDEQLFRAKCILNDGDAASFLPNKSHGRFLKMFLGPINVRATRKDVQLK 335
            KL+E L +A+CI+ DGDA+SFLP+K  GRFLKMFLGPINVRA+RKDVQ K
Sbjct: 65  AKLEEDLQKARCIIADGDASSFLPSKPQGRFLKMFLGPINVRASRKDVQFK 115


>ref|XP_002317646.1| predicted protein [Populus trichocarpa] gi|222860711|gb|EEE98258.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   ASSFISKSTAEEQSLRQRALSINSNIQKLRSSVPHGQKVPLSLILHACLPNNNSFSFIIL 182
           A+S I+KS+ +EQSLRQ+ALS+ S++++ RS                 L  NN  +    
Sbjct: 41  AASLIAKSSHDEQSLRQKALSLESSVRRCRS----------------LLNRNNGLA---- 80

Query: 183 PKL-DEQLFRAKCILNDGDAASFLPNKSHGRFLKMFLGPINVRATRKDVQLK 335
           PKL +E L +A+CI+ DGDA++FLP+K  GRFLKMFLGPINVRA+RKDVQ K
Sbjct: 81  PKLLEEDLQKARCIITDGDASAFLPSKPQGRFLKMFLGPINVRASRKDVQWK 132


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