BLASTX nr result

ID: Coptis21_contig00007172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007172
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34539.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_003631380.1| PREDICTED: LOW QUALITY PROTEIN: protein NLP7...   111   7e-23
ref|XP_002299449.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_003592270.1| hypothetical protein MTR_1g100970 [Medicago ...   103   1e-20
ref|XP_003536463.1| PREDICTED: protein NLP6-like [Glycine max]        102   3e-20

>emb|CBI34539.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/144 (43%), Positives = 78/144 (54%), Gaps = 16/144 (11%)
 Frame = +2

Query: 68  LEQYSFMDLDIDLDSSWPFDQNMFXXXXXXXXXXXXXXXGHPCSPIWVFSDDEDDKSEP- 244
           +++ SFMD D+DLD SWP DQ  F                 PCSP+W FSDD DDK    
Sbjct: 21  VDRDSFMDFDLDLDGSWPLDQISFVSNPMSPFLFSSSD--QPCSPLWAFSDDADDKPSAI 78

Query: 245 ---------------PCNSESINANPVGEKKKKKLLPTSVALVPVETQDGSSLIKEKMLQ 379
                           CN + I  +     +K++L P+   L P+E  DG  +IKE+M Q
Sbjct: 79  GVGGGLRLSECSRFLTCNPDLIPESRTENDEKRRLPPSVFTLTPIENPDGCCIIKERMTQ 138

Query: 380 ALQYFKESMEQQILAQVWAPVKNG 451
           AL+YFKES EQ +LAQVWAPVKNG
Sbjct: 139 ALRYFKESTEQHVLAQVWAPVKNG 162


>ref|XP_003631380.1| PREDICTED: LOW QUALITY PROTEIN: protein NLP7-like [Vitis vinifera]
          Length = 982

 Score =  111 bits (277), Expect = 7e-23
 Identities = 62/147 (42%), Positives = 78/147 (53%), Gaps = 19/147 (12%)
 Frame = +2

Query: 68  LEQYSFMDLDIDLDSSWPFDQNMFXXXXXXXXXXXXXXXGHPCSPIWVFSDDEDDK---- 235
           +++ SFMD D+DLD SWP DQ  F                 PCSP+W FSDD DDK    
Sbjct: 21  VDRDSFMDFDLDLDGSWPLDQISFVSNPMSPFLFSSSD--QPCSPLWAFSDDADDKPSAI 78

Query: 236 ---------------SEPPCNSESINANPVGEKKKKKLLPTSVALVPVETQDGSSLIKEK 370
                          S    N + I  +     +K++L P+   L P+E  DG  +IKE+
Sbjct: 79  GVGGEVYSFMLTXKFSLDIGNPDLIPESRTENDEKRRLPPSVFTLTPIENPDGCCIIKER 138

Query: 371 MLQALQYFKESMEQQILAQVWAPVKNG 451
           M QAL+YFKES EQ +LAQVWAPVKNG
Sbjct: 139 MTQALRYFKESTEQHVLAQVWAPVKNG 165


>ref|XP_002299449.1| predicted protein [Populus trichocarpa] gi|222846707|gb|EEE84254.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  105 bits (262), Expect = 4e-21
 Identities = 58/127 (45%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
 Frame = +2

Query: 86  MDLDIDLDSSWPFDQNMFXXXXXXXXXXXXXXXGHPCSPIWVFSDDEDDKSEPPCNSESI 265
           M+LD+DLDSSWP DQ  F                 PCSP+W FSD  DD+          
Sbjct: 1   MELDLDLDSSWPLDQISFISSNPMSTFLISSSNEQPCSPLWAFSDAADDRLLAAAAGGG- 59

Query: 266 NANPVGEKK-----KKKLLPTSVALVPVETQDGSSLIKEKMLQALQYFKESMEQQILAQV 430
           N N V E K       KL    + L+P++  DG  +IKE+M +AL++FKES EQ ILAQV
Sbjct: 60  NPNSVTESKGENDDNSKLPSPFLGLMPIDNPDGYCIIKERMTRALRHFKESTEQHILAQV 119

Query: 431 WAPVKNG 451
           WAPVKNG
Sbjct: 120 WAPVKNG 126


>ref|XP_003592270.1| hypothetical protein MTR_1g100970 [Medicago truncatula]
           gi|355481318|gb|AES62521.1| hypothetical protein
           MTR_1g100970 [Medicago truncatula]
          Length = 979

 Score =  103 bits (258), Expect = 1e-20
 Identities = 65/153 (42%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
 Frame = +2

Query: 38  EEENQSFP----VTLEQYSF-MDLDIDLDSSWPFDQNMFXXXXXXXXXXXXXXXGHPCSP 202
           EEENQ FP     +LE++   MD D+DL++SWP D   F                 P SP
Sbjct: 5   EEENQDFPPKTKTSLEEHGCSMDFDLDLETSWPLDHMSFITNPMSPFLFSNISD-QPSSP 63

Query: 203 IWVFSDDEDDKSEPP----------CNSESINANPVGEKKKKKLLPTSVALVPVETQDGS 352
           +W F+D ED K              C+S SI    V +   K LLP    L P+E  DG 
Sbjct: 64  LWTFTDGEDGKLAASALSDCHKIFSCDSNSITEKLVEKDDNKTLLPP--LLPPIENLDGY 121

Query: 353 SLIKEKMLQALQYFKESMEQQILAQVWAPVKNG 451
            +IKEKM QAL+YFKE  E  +LAQVWAPV+NG
Sbjct: 122 CVIKEKMTQALRYFKEWTELNVLAQVWAPVRNG 154


>ref|XP_003536463.1| PREDICTED: protein NLP6-like [Glycine max]
          Length = 963

 Score =  102 bits (254), Expect = 3e-20
 Identities = 58/132 (43%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
 Frame = +2

Query: 86  MDLDIDLDSSWPFDQNMFXXXXXXXXXXXXXXXGHPCSPIWVFSDDEDDKSEPP------ 247
           MD D+DL++SWP D   F                 P SP+W FSD ED K          
Sbjct: 1   MDFDLDLETSWPLDHMAFGSNPMSPFLFSTSSD-QPYSPLWAFSDGEDPKLPASAFSDCH 59

Query: 248 ----CNSESINANPVGEKKKKKLLPTSVALVPVETQDGSSLIKEKMLQALQYFKESMEQQ 415
               C+S SI   PV     KK LP  V + PVE  DG  +IKE+M QAL+YFKE  E  
Sbjct: 60  KIFSCDSNSIAEKPVENDDNKKNLPPLVPMPPVENLDGYCVIKERMTQALRYFKELTELN 119

Query: 416 ILAQVWAPVKNG 451
           +LAQVWAPV+NG
Sbjct: 120 VLAQVWAPVRNG 131


Top