BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007171
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   421   e-115
ref|XP_002300622.1| chromatin remodeling complex subunit [Populu...   406   e-111
ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   388   e-105
ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   387   e-105
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   377   e-102

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
            gi|297745602|emb|CBI40767.3| unnamed protein product
            [Vitis vinifera]
          Length = 492

 Score =  421 bits (1081), Expect = e-115
 Identities = 231/478 (48%), Positives = 292/478 (61%), Gaps = 13/478 (2%)
 Frame = +3

Query: 69   MATMSPIKEQVTPNQSKSLEI--SPTPVLPTKNKETSTSSDSKL------QESSNDVITI 224
            MA  SPIK+ +  +     +   S + ++PT   E   ++ +        + S  + I I
Sbjct: 1    MAAQSPIKDPIGASTETLTQQPDSSSSIIPTVKSEIPVAASASPSVGIVPRASEPETINI 60

Query: 225  PSHSRWFSWDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQV 404
            PS+SRWFSW+ VHECE R LPEFF+ R P KNP+VY Y RNSII  FR++PSRK+TFT V
Sbjct: 61   PSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSRKLTFTDV 120

Query: 405  RKVLVGDVGSTRRVFDFLEGWGLINYTGALQKSHSKLDDKEXXXXXXXXXXXXXXXKETS 584
            RK+LVGDVGS RRVFDFLE WGLINY+G+  K   K ++K+                   
Sbjct: 121  RKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKSGGASSHTGDAGGGAVE 180

Query: 585  ----KRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNTSE 752
                +R+CS CK++CSIACF  DK D TLCARC+VRG YR+G +++DFRRVEISE   + 
Sbjct: 181  SIPKRRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVNSSDFRRVEISEDTKAG 240

Query: 753  WTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFIKLPFAEQLINRPDSLAVD-E 929
            WTDKETL+LLEAV HYGDDWKKVAEHVGGR EKECV  FIKL F EQ +    S  VD +
Sbjct: 241  WTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKLSFGEQYLGHTSSGDVDNK 300

Query: 930  YQQTRTPSEAETGEDNSIPSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXXX 1109
            + Q +  S+A  G++N   SS +KK RLTP SD SNPIMAQ AFLSA+            
Sbjct: 301  FSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQAAFLSALVGVEVAEAAARA 360

Query: 1110 XXXXLSDTNLPTDQRRIERRSNSLPEKRDHYESASGANGSDDMNRLVEAVAXXXXXXXXX 1289
                LSD     D R+++    S        +    +NG+   N L  A           
Sbjct: 361  AVASLSD----VDPRKMKEGLGSFANGARIQDPNVESNGNTTSNVLEGAYVDAKSLLERE 416

Query: 1290 XXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQLHLMKNLLFADQLSLLFKR 1463
                 R+I+ I  VQMK+++DKI  FEE EL +EKEW+QL  MKNLLF DQL+LLF++
Sbjct: 417  ELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKNLLFVDQLTLLFQK 474


>ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222842348|gb|EEE79895.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 500

 Score =  406 bits (1044), Expect = e-111
 Identities = 223/479 (46%), Positives = 285/479 (59%), Gaps = 14/479 (2%)
 Frame = +3

Query: 69   MATMSPIKEQVTPNQSKSLEISPTPVLPTKNKETSTSSDSKLQESSNDVITIPSHSRWFS 248
            MA++SP    + P    S  + P    PT    +          S  DV+ IPS+SRWFS
Sbjct: 1    MASVSPAPPSLHPKIPLSSTVKPEIQPPTTAAPSPRPPQPPPPSSEPDVVHIPSYSRWFS 60

Query: 249  WDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHPSRKITFTQVRKVLVGDV 428
            WD +HECE R LPEFF+ R P KNP VY Y RNSII  FRK+PS K+TFT++RK LVGDV
Sbjct: 61   WDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIRKTLVGDV 120

Query: 429  GSTRRVFDFLEGWGLINYTGALQKSHSKLDDKE-------------XXXXXXXXXXXXXX 569
            GS RRVFDFL+ WGLINY+  L K     D K+                           
Sbjct: 121  GSIRRVFDFLDAWGLINYS-PLNKQLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASN 179

Query: 570  XKETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNNDFRRVEISEQNTS 749
             K+  KR CS CK++CSIACF  DK D TLCARC+VRG YR+G S++DFRRVEISE+  +
Sbjct: 180  TKDNCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEART 239

Query: 750  EWTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFIKLPFAEQLINRPDSLAVD- 926
            +WT+KETL LLEAV HY DDWKKVA+HVGGR+EK+C+  FIKLPF E   +  D   VD 
Sbjct: 240  DWTEKETLQLLEAVMHYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGDVDS 299

Query: 927  EYQQTRTPSEAETGEDNSIPSSPAKKTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXX 1106
            +Y Q +   + E+G + +   S +KK RL+P  D SNPIMAQ AFLSA+           
Sbjct: 300  KYNQIKDCDDDESGRNGNGSPSTSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAAR 359

Query: 1107 XXXXXLSDTNLPTDQRRIERRSNSLPEKRDHYESASGANGSDDMNRLVEAVAXXXXXXXX 1286
                 L++      +  +E     +     H +S   +NG  +++  V+A          
Sbjct: 360  AAVTTLTEVEYGGSKGSLE----FVSRVTKHLDSGVASNGDTNLSASVKACLDANSLLEK 415

Query: 1287 XXXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQLHLMKNLLFADQLSLLFKR 1463
                  R+I+ I  VQMK++QDKI +FEE++LQ+EKEW+QL  MKNLLFADQLS+L KR
Sbjct: 416  EESDVERAISRITEVQMKEIQDKILRFEELDLQMEKEWQQLDQMKNLLFADQLSVLSKR 474


>ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 493

 Score =  388 bits (996), Expect = e-105
 Identities = 220/495 (44%), Positives = 292/495 (58%), Gaps = 30/495 (6%)
 Frame = +3

Query: 69   MATMSPIKEQVTPNQSKSLEISPTPVL--PTKNKETSTSSDSKL---------------Q 197
            MA  SP+++  T   +K    SP+P L  P    ET  S   +                Q
Sbjct: 1    MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQ 60

Query: 198  ESSNDVITIPSHSRWFSWDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHP 377
             +S D I +PS+SRWFSW+ +HECE R LPEFF+ R P KNP+VY Y+RNSI+K FR+ P
Sbjct: 61   STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 120

Query: 378  SRKITFTQVRKVLVGDVGSTRRVFDFLEGWGLINYTGALQKSHSKLDDKEXXXXXXXXXX 557
            S+KITFT +RK LV DVGS RRVFDFLE WGLINY+ +      K DD++          
Sbjct: 121  SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 180

Query: 558  XXXXX--------KETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNND 713
                         K+ SKR CS CK++CSIACF  DK D TLCARC+VRG YR+G S++D
Sbjct: 181  GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 240

Query: 714  FRRVEISEQNTSEWTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFIKLPFAEQ 893
            FRRVEI++   ++WTDKETL+LLEA+THYGDDWKKVA+HVGGRTE+ECVA+F+KLP  EQ
Sbjct: 241  FRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQ 300

Query: 894  LINRPDSLAVDEYQQTRTPSEA-----ETGEDNSIPSSPAKKTRLTPFSDTSNPIMAQVA 1058
                PDS  +D     +  + A      TG+  +  S P K+ RL+P +D SNPIMAQ A
Sbjct: 301  FHGYPDSEHIDNNCTVKDEASANLTLESTGKIGT--SIPNKRIRLSPLADASNPIMAQAA 358

Query: 1059 FLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQRRIERRSNSLPEKRDHYESASGANGSDDM 1238
            FLS++                LS+ +   D       + ++ E+ +   S  G+  S   
Sbjct: 359  FLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQGNDAASHGGSCLSRGS 418

Query: 1239 NRLVEAVAXXXXXXXXXXXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQLHLM 1418
               +E                 ++I+ I+ VQMK++ DK+  FEE ELQ+EK ++QL  M
Sbjct: 419  TMDME-----------------KAISHIVNVQMKEIVDKLNGFEEGELQMEKVFKQLDQM 461

Query: 1419 KNLLFADQLSLLFKR 1463
            K++LF DQL+LLF +
Sbjct: 462  KSMLFVDQLNLLFNK 476


>ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 555

 Score =  387 bits (995), Expect = e-105
 Identities = 220/495 (44%), Positives = 292/495 (58%), Gaps = 30/495 (6%)
 Frame = +3

Query: 69   MATMSPIKEQVTPNQSKSLEISPTPVL--PTKNKETSTSSDSKL---------------Q 197
            MA  SP+++  T   +K    SP+P L  P    ET  S   +                Q
Sbjct: 63   MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQ 122

Query: 198  ESSNDVITIPSHSRWFSWDKVHECERRSLPEFFEGRLPLKNPKVYMYIRNSIIKLFRKHP 377
             +S D I +PS+SRWFSW+ +HECE R LPEFF+ R P KNP+VY Y+RNSI+K FR+ P
Sbjct: 123  STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 182

Query: 378  SRKITFTQVRKVLVGDVGSTRRVFDFLEGWGLINYTGALQKSHSKLDDKEXXXXXXXXXX 557
            S+KITFT +RK LV DVGS RRVFDFLE WGLINY+ +      K DD++          
Sbjct: 183  SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 242

Query: 558  XXXXX--------KETSKRFCSLCKTVCSIACFVSDKLDQTLCARCFVRGQYRIGPSNND 713
                         K+ SKR CS CK++CSIACF  DK D TLCARC+VRG YR+G S++D
Sbjct: 243  GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 302

Query: 714  FRRVEISEQNTSEWTDKETLNLLEAVTHYGDDWKKVAEHVGGRTEKECVARFIKLPFAEQ 893
            FRRVEI++   ++WTDKETL+LLEA+THYGDDWKKVA+HVGGRTE+ECVA+F+KLP  EQ
Sbjct: 303  FRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQ 362

Query: 894  LINRPDSLAVDEYQQTRTPSEA-----ETGEDNSIPSSPAKKTRLTPFSDTSNPIMAQVA 1058
                PDS  +D     +  + A      TG+  +  S P K+ RL+P +D SNPIMAQ A
Sbjct: 363  FHGYPDSEHIDNNCTVKDEASANLMLESTGKIGT--SIPNKRIRLSPLADASNPIMAQAA 420

Query: 1059 FLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQRRIERRSNSLPEKRDHYESASGANGSDDM 1238
            FLS++                LS+ +   D       + ++ E+ +   S  G+  S   
Sbjct: 421  FLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQGNDAASHGGSCLSRGS 480

Query: 1239 NRLVEAVAXXXXXXXXXXXXXXRSITDILGVQMKDLQDKIFQFEEIELQVEKEWEQLHLM 1418
               +E                 ++I+ I+ VQMK++ DK+  FEE ELQ+EK ++QL  M
Sbjct: 481  TMDME-----------------KAISHIVDVQMKEIVDKLNGFEEGELQMEKVFKQLDQM 523

Query: 1419 KNLLFADQLSLLFKR 1463
            K++LF DQL+LLF +
Sbjct: 524  KSMLFVDQLNLLFNK 538


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score =  377 bits (969), Expect = e-102
 Identities = 214/454 (47%), Positives = 277/454 (61%), Gaps = 11/454 (2%)
 Frame = +3

Query: 135  PTPVLPTKN-KETSTSSDSKLQESSNDVITIPSHSRWFSWDKVHECERRSLPEFFEGRLP 311
            P PV      K  +  SDSK    +N VI +PS+SRWFSWD + ECE R LPEFFE    
Sbjct: 26   PQPVAAASAVKPEAPLSDSKASAEAN-VIVVPSYSRWFSWDSIDECEVRHLPEFFESAS- 83

Query: 312  LKNPKVYMYIRNSIIKLFRKHPSRKITFTQVRKVLVGDVGSTRRVFDFLEGWGLINY--T 485
             K+P+VY Y RNSI+K FR +P+RKITFT VRK LVGDVGS RRVFDFLE WGLINY  +
Sbjct: 84   -KSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSIRRVFDFLETWGLINYHPS 142

Query: 486  GALQKSHSKLDDKEXXXXXXXXXXXXXXX--KETSKRFCSLCKTVCSIACFVSDKLDQTL 659
             +L K   K DDKE                 KE +KR CS CK VC+IACF  DK D TL
Sbjct: 143  SSLTKP-LKWDDKETKSDSASNTTESSSAPAKENTKRLCSGCKVVCTIACFACDKYDLTL 201

Query: 660  CARCFVRGQYRIGPSNNDFRRVEISEQNTSEWTDKETLNLLEAVTHYGDDWKKVAEHVGG 839
            CARC+VRG YR+G +++DFRRVEISE+  ++W +KET NLLEA+THY DDWK+V++HV G
Sbjct: 202  CARCYVRGNYRVGVNSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDWKRVSQHVPG 261

Query: 840  RTEKECVARFIKLPFAEQLINRPDSLAVDEYQQTRTP------SEAETGEDNSIPSSPAK 1001
            RTEKECVA F+KLPF +Q  +     AV+    +  P      ++AE+  D    + P K
Sbjct: 262  RTEKECVAHFLKLPFVDQFQHYQQHPAVNGTDDSCNPLKRVTNADAESELDTVASAEPNK 321

Query: 1002 KTRLTPFSDTSNPIMAQVAFLSAMXXXXXXXXXXXXXXXXLSDTNLPTDQRRIERRSNSL 1181
            + RLTP +D SNPIMAQ AFLSA+                LS+    T   +I  R  S 
Sbjct: 322  RMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAALTTLSEVYKAT---KINYR--SF 376

Query: 1182 PEKRDHYESASGANGSDDMNRLVEAVAXXXXXXXXXXXXXXRSITDILGVQMKDLQDKIF 1361
            P      ++   +NG +  +    +                ++I++I+ VQMK++QDK+ 
Sbjct: 377  PRNTLLQDAGIMSNGGNTSDSFQGSRLHANIQLEKEELDVEKAISEIIEVQMKNIQDKLV 436

Query: 1362 QFEEIELQVEKEWEQLHLMKNLLFADQLSLLFKR 1463
            QFE+++L +EKE +QL  MKN+ F DQL+LLF +
Sbjct: 437  QFEDLDLLMEKEGQQLEQMKNMFFLDQLTLLFHK 470