BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007132
         (1665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR...   405   e-110
emb|CBI35579.3| unnamed protein product [Vitis vinifera]              405   e-110
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   385   e-104
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   360   6e-97
gb|ABK95700.1| unknown [Populus trichocarpa]                          353   6e-95

>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 515

 Score =  405 bits (1040), Expect = e-110
 Identities = 217/403 (53%), Positives = 282/403 (69%), Gaps = 15/403 (3%)
 Frame = -3

Query: 1591 SIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIPEKGGGSKGVRAV 1412
            S+RKLILG E Y SRPC+ +DVC+E QVQLVLE+L + FDDLVPL+IP KGGG++ VR +
Sbjct: 116  SLRKLILGSEEYRSRPCVNLDVCSEHQVQLVLEVLGEFFDDLVPLLIPAKGGGTQAVRVI 175

Query: 1411 LTRSEEDKRLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNCLEEFSFIHSKFL 1232
            LT SEEDK L K         QNK+V GFREVID+ISASQKP+V++N L EF+FIHSKFL
Sbjct: 176  LTSSEEDKDLLKRELQDLEEEQNKRVCGFREVIDLISASQKPVVSHNSLNEFAFIHSKFL 235

Query: 1231 ASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLKRQFFVPLDIEIP 1052
            + LPP+M+EFMCSLR+VFP +LD+ HL+KEIGPLKK +N+ AA S LKR+FFVP+D+EIP
Sbjct: 236  SPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSAAASCLKRRFFVPIDMEIP 295

Query: 1051 HQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQGISINRYANNFSPCSAN 872
            HQ   +E+K +GHNVL  ++L A L S+LKITP+  +S   H   ++  YAN F P S N
Sbjct: 296  HQA-SNEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGHLASALEGYANIFHPHSTN 354

Query: 871  ----------IWVNNTMKVSSRDLILLWGFSSGMPARELKSLLCGTHDVFLEDFELRLLD 722
                      +W ++T KVSS  L+ +WGF   M A  LK LL G+H VF E+F++R++D
Sbjct: 355  TEDPIDGGIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKRLLQGSHSVFSEEFDVRMVD 414

Query: 721  KSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNL 542
             SCA+VVF +   ++ FL+ I S  +    LR+++SEGLRAA YE YK  C     E +L
Sbjct: 415  GSCAIVVFWQSGLSQTFLEAISSNWIS-GLLREMVSEGLRAAGYETYKNACRLGFWEADL 473

Query: 541  ADSLGKTLAEQTDDILISDSKK----AADVYWSSESII-LDEL 428
            ADSL K L E+ D    +DS+      + +YWS +SII LDEL
Sbjct: 474  ADSLDKAL-EEPDHNSEADSEAKPTGPSQIYWSRDSIINLDEL 515


>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
          Length = 6458

 Score =  405 bits (1040), Expect = e-110
 Identities = 217/403 (53%), Positives = 282/403 (69%), Gaps = 15/403 (3%)
 Frame = -3

Query: 1591 SIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIPEKGGGSKGVRAV 1412
            S+RKLILG E Y SRPC+ +DVC+E QVQLVLE+L + FDDLVPL+IP KGGG++ VR +
Sbjct: 6059 SLRKLILGSEEYRSRPCVNLDVCSEHQVQLVLEVLGEFFDDLVPLLIPAKGGGTQAVRVI 6118

Query: 1411 LTRSEEDKRLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNCLEEFSFIHSKFL 1232
            LT SEEDK L K         QNK+V GFREVID+ISASQKP+V++N L EF+FIHSKFL
Sbjct: 6119 LTSSEEDKDLLKRELQDLEEEQNKRVCGFREVIDLISASQKPVVSHNSLNEFAFIHSKFL 6178

Query: 1231 ASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLKRQFFVPLDIEIP 1052
            + LPP+M+EFMCSLR+VFP +LD+ HL+KEIGPLKK +N+ AA S LKR+FFVP+D+EIP
Sbjct: 6179 SPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSAAASCLKRRFFVPIDMEIP 6238

Query: 1051 HQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQGISINRYANNFSPCSAN 872
            HQ   +E+K +GHNVL  ++L A L S+LKITP+  +S   H   ++  YAN F P S N
Sbjct: 6239 HQA-SNEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGHLASALEGYANIFHPHSTN 6297

Query: 871  ----------IWVNNTMKVSSRDLILLWGFSSGMPARELKSLLCGTHDVFLEDFELRLLD 722
                      +W ++T KVSS  L+ +WGF   M A  LK LL G+H VF E+F++R++D
Sbjct: 6298 TEDPIDGGIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKRLLQGSHSVFSEEFDVRMVD 6357

Query: 721  KSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNL 542
             SCA+VVF +   ++ FL+ I S  +    LR+++SEGLRAA YE YK  C     E +L
Sbjct: 6358 GSCAIVVFWQSGLSQTFLEAISSNWIS-GLLREMVSEGLRAAGYETYKNACRLGFWEADL 6416

Query: 541  ADSLGKTLAEQTDDILISDSKK----AADVYWSSESII-LDEL 428
            ADSL K L E+ D    +DS+      + +YWS +SII LDEL
Sbjct: 6417 ADSLDKAL-EEPDHNSEADSEAKPTGPSQIYWSRDSIINLDEL 6458


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi|223533357|gb|EEF35108.1|
            ribonuclease, putative [Ricinus communis]
          Length = 624

 Score =  385 bits (988), Expect = e-104
 Identities = 206/400 (51%), Positives = 267/400 (66%), Gaps = 12/400 (3%)
 Frame = -3

Query: 1591 SIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIPEKGGGSKGVRAV 1412
            S+RKL+LG E Y SRPC+ IDVC+ERQV LV+EML +  DDLVPL++P KGGG++ VR V
Sbjct: 226  SLRKLVLGLEEYNSRPCINIDVCSERQVHLVIEMLQEFADDLVPLIVPAKGGGTQAVRVV 285

Query: 1411 LTRSEEDKRLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNCLEEFSFIHSKFL 1232
            LT S+ED+ L +         QNKK+RGFREVID+IS S+KP+V++N L + +FIHSKFL
Sbjct: 286  LTSSKEDRDLLQMELQNLEDEQNKKIRGFREVIDLISGSEKPVVSHNSLNDLAFIHSKFL 345

Query: 1231 ASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLKRQFFVPLDIEIP 1052
            A LPPSM EF CSLRLVFPQ++D+ HL+KEI PLKK +NI  A S LK  FF P+D+EIP
Sbjct: 346  APLPPSMEEFTCSLRLVFPQVIDVNHLMKEISPLKKVTNIPMATSYLKNWFFAPVDMEIP 405

Query: 1051 HQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQGISINRYANNFSPC--- 881
                 +E K +GHNV+    LFAKL  +LK+ P++ +S+  +   +I  Y N FSP    
Sbjct: 406  FPAMVNEGKIHGHNVMRICQLFAKLCYILKLAPNSIQSNEKNLASAIEAYVNIFSPYFPG 465

Query: 880  -------SANIWVNNTMKVSSRDLILLWGFSSGMPARELKSLLCGTHDVFLEDFELRLLD 722
                      IW NNT KVS +DL+ LWGF   M A  LKSLL  +H VF E+F++R +D
Sbjct: 466  PQEPTDEDVRIWTNNTRKVSCQDLVFLWGFRYRMSAGMLKSLLQQSHKVFSEEFDVRFVD 525

Query: 721  KSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNL 542
            KSCA+VVF +P  +   L V+         LR+++SEG+RAA Y+ Y RVC   +   NL
Sbjct: 526  KSCAIVVFWEPGLSNTLLDVLKGSSEIVGPLREMVSEGVRAASYDTYNRVCRLGLWHENL 585

Query: 541  ADSLGKTLAEQTDDILISDS-KKAADVYWSSESII-LDEL 428
            ADSL K LA+ TD    SDS   +++ YW  E +I LDEL
Sbjct: 586  ADSLDKALAD-TDHPSDSDSVTSSSNTYWCHEWMINLDEL 624


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
            predicted protein [Populus trichocarpa]
          Length = 626

 Score =  360 bits (924), Expect = 6e-97
 Identities = 192/398 (48%), Positives = 261/398 (65%), Gaps = 10/398 (2%)
 Frame = -3

Query: 1591 SIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIPEKGGGSKGVRAV 1412
            S+RKL+LG E Y SRPC+ IDVC+ERQ QLV+EML +  DD+VPL+IP KGG  + VR V
Sbjct: 230  SLRKLVLGNEEYDSRPCMNIDVCSERQAQLVVEMLQEFADDVVPLIIPAKGGAMQAVRVV 289

Query: 1411 LTRSEEDKRLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNCLEEFSFIHSKFL 1232
            LT S+EDK L +           KKVRGFREVID+ISASQKP+V++  L + + IHSKF+
Sbjct: 290  LTSSKEDKDLLQGKLQNDEQELKKKVRGFREVIDLISASQKPVVSHGSLNDLTVIHSKFI 349

Query: 1231 ASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLKRQFFVPLDIEIP 1052
            A LPP+++EFMCSLRL FP ++D+ HL+KEI PL+K ++I  AIS LK +FF P+D+EIP
Sbjct: 350  APLPPTVDEFMCSLRLAFPLVIDVNHLMKEISPLRKVTSIPVAISQLKNRFFTPIDMEIP 409

Query: 1051 HQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQGISINRYANNFSP-CSA 875
             Q   +E+  +G NV+    LFA+L S+LKI P A +S  +    ++  YAN FSP C+A
Sbjct: 410  CQAMENEDTIHGQNVVKICELFARLCSILKIDPAAVKSDEEKGASALEAYANIFSPFCTA 469

Query: 874  N---------IWVNNTMKVSSRDLILLWGFSSGMPARELKSLLCGTHDVFLEDFELRLLD 722
            +         IW NNT  VS  D++ LWGF   + A  LKSLL  +H+ F ++F++RL+D
Sbjct: 470  SEEPIDGEIKIWTNNTRTVSCEDMVFLWGFGDRVTAGILKSLLQESHEAFSKEFDVRLVD 529

Query: 721  KSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNL 542
             SCA+V+F +    E FL  +         LR+++SEGLRAA YE Y R C   + E++L
Sbjct: 530  NSCAIVIFWQHGLTETFLNTMNKCSDMRGPLREMVSEGLRAAGYETYNRACRLGLWESSL 589

Query: 541  ADSLGKTLAEQTDDILISDSKKAADVYWSSESIILDEL 428
            ADSL + LA+ +D    +DSK       +   I LD+L
Sbjct: 590  ADSLDRALAD-SDCASEADSKTKCSDRCNEWIINLDDL 626


>gb|ABK95700.1| unknown [Populus trichocarpa]
          Length = 454

 Score =  353 bits (907), Expect = 6e-95
 Identities = 184/374 (49%), Positives = 247/374 (66%), Gaps = 14/374 (3%)
 Frame = -3

Query: 1591 SIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEMLNKCFDDLVPLVIPEKGGGSKGVRAV 1412
            S+RKL+LG E Y SRPC+ IDVC+ERQ QLV+EML +  DD+VPL+IP KGG  + VR V
Sbjct: 80   SLRKLVLGNEEYDSRPCMNIDVCSERQAQLVVEMLQEFADDVVPLIIPAKGGAMQAVRVV 139

Query: 1411 LTRSEEDKRLFKXXXXXXXXXQNKKVRGFREVIDVISASQKPIVAYNCLEEFSFIHSKFL 1232
            LT S+EDK L +           KKVRGFREVID+ISASQKP+V++  L + + IHSKF+
Sbjct: 140  LTSSKEDKDLLQGKLQNDEQELKKKVRGFREVIDLISASQKPVVSHGSLNDLTVIHSKFI 199

Query: 1231 ASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLKKASNIYAAISNLKRQFFVPLDIEIP 1052
            A LPP+++EFMCSLRL FP ++D+ HL+KEI  L+K ++I  AIS LK +FF P+D+EIP
Sbjct: 200  APLPPTVDEFMCSLRLAFPLVIDVNHLMKEISALRKVTSIPVAISQLKNRFFTPIDMEIP 259

Query: 1051 HQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDAQESSSDHQGISINRYANNFSP-CSA 875
             Q   +E+  +G NV+    LFA+L S+LKI P A +S  +    ++  YAN FSP C+A
Sbjct: 260  CQAMENEDTIHGQNVVKICELFARLCSILKIDPAAVKSDEEKGASALEAYANIFSPFCTA 319

Query: 874  -------------NIWVNNTMKVSSRDLILLWGFSSGMPARELKSLLCGTHDVFLEDFEL 734
                         N W NNT  VS  DL+ LWGF   + A  LKSLL  +H+ F ++F++
Sbjct: 320  SEEPIDGEIKIWTNKWTNNTRTVSCEDLVFLWGFGDRVTAGVLKSLLQESHEAFSKEFDV 379

Query: 733  RLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAIL 554
            RL+D SCA+V+F +    E FL  +         LR+++SEGLRAA YE Y R C   + 
Sbjct: 380  RLVDNSCAIVIFWQHGLTETFLNTMNKCSDMRGPLREMVSEGLRAAGYETYNRACRLGLW 439

Query: 553  ETNLADSLGKTLAE 512
            E++LADSL + LA+
Sbjct: 440  ESSLADSLDRALAD 453